GenBank-Updates@genbank.bio.net (08/16/90)
LOCUS HS6MCP 4440 bp ds-DNA VRL 16-AUG-1990
DEFINITION Human herpesvirus type 6 major capsid protein (MCP) gene, complete
cds.
ACCESSION M33515
KEYWORDS major capsid protein.
SOURCE Human herpesvirus type 6 DNA.
ORGANISM Human herpesvirus type 6
Viridae; ds-DNA enveloped viruses; Herpesviridae;
Alphaherpesvirinae.
REFERENCE 1 (bases 1 to 4440)
AUTHORS Littler,E., Lawrence,G., Liu,M.-Y., Barrell,B.G. and Arrand,J.R.
TITLE Identification, cloning, and expression of the major capsid protein
gene of human herpesvirus 6
JOURNAL J. Virol. 64, 714-722 (1990)
STANDARD simple staff_review
FEATURES from to/span description
pept 235 4272 major capsid protein (MCP)
BASE COUNT 1422 a 1169 c 785 g 1064 t
ORIGIN
1 tatcgtgaac gatatttggc ccggacgttt gaaaaatttt ctctatgatt gactcgatct
61 tttccagaac tacaggcatg gatcgcgcta aacgagtttc ctcgtcgcga gacacttcag
121 cggtcagatc acacgaatct ataaaaactg gaatcgaccg tgcacaagtg gaaccaaaac
181 atgaattaac tattaaagtt tcacaattac cggtgtgctg cataacgccg aaacatggaa
241 aattggcagg cgaccgaaat tttacctaag atcgaagcac ctctaaatat tttcaatgac
301 attaaaacat acacagccga acaacttttt gacaatttgc gaatttattt cggtgacgat
361 ccgagccgtt acaacatcag ttttgaagcc ttactcggaa tctactgcaa caaaatagaa
421 tggattaact ttttcaccac gccgatcgcc gttgcagcga acgtaatccg cttcaatgat
481 gtgagtcgaa tgaccctcgg gaaggttctc ttctttattc aattacctag agtcgctaca
541 ggaaacgacg taactgcttc aaaagaaacc accatcatgg tagccaaaca ctcagaaaaa
601 caccccataa acatatcgtt cgatttgagc gctgcctgtc tggaacatct ggaaaacaca
661 tttaaaaaca cagtcatcga tcagatttta aacatcaatg cgttacatac agtcttaaga
721 tctttaaaga attcagccga ttcgctcgag cgaggtttga ttcacgcatt catgcaaacc
781 ttattgagaa aatctccccc gcaatttatc gtcctgacca tgaatgagaa caaagtacat
841 aataaacaag ctctgagccg agtacagcgc agcaacatgt ttcagagcct gaagaacaga
901 ttgttaacgt cattattttt tttgaacagg aataataata tttcatatat ctatagaatt
961 ctaaacgaca tgatggaatc ggtcacggaa agcattctaa atgatacgaa caactacact
1021 tccaaagaaa acgtccccct agatggtgtt ttattaggac cgatcggctc tatccaaaaa
1081 ctcaccagca tactctccca gtacatctcc acacaagtcg tctccgcccc aatctcatat
1141 ggtcacttta ttatgggcaa agaaaacgca gtgactgcga ttgcataccg tgcaatcatg
1201 gccgatttta ctcaattcac cgtgaacgcc gggacagaac aacaagacac taacaacaaa
1261 tcagaaatct tcgacaaaag ccgcgcgtac gccgacctaa agctgaacac gttgaaattg
1321 ggagataaat tagtcgcatt cgaccaccta cacaaagttt acaaaaacac agacgtcaac
1381 gatccgctag aacagagctt acaactaaca ttctttttcc ctttgggtat ctacataccg
1441 agcgagaccg gtttcagtac aatggaaaca cgtgtgaaat taaacgacac catggaaaac
1501 aacctaccca ccagcgtttt tttccacaat aaagaccaag tcgtgcagcg aattgatttt
1561 gccgacatat taccgtcggt ttgccatccc attgtccacg actcgaccat cgtcgaacga
1621 ctcatgaaaa gcgaaccatt gcctaccggc caccgctttt cccaactatg tcaactaaaa
1681 attacccgag aaaacccagc caggatctta cagaccttat acaacttata cgaaagtcga
1741 caagaagtac ccaaaaacac caacgtctta aaaaacgaat taaacattga agatttttac
1801 aaaccggaca atccaacact gccgaccgaa agacacccct tcttcgatct cacgtatatc
1861 cagaaaaacc gagccacaga agtactctgc acaccaagaa taatgatagg caacatacct
1921 ttaccgttag ctccagtctc tttccacgaa gcccgtacaa atcaaatact ggaacatgca
1981 aagacgaact gccaaaagta cgacttcacc ctcaaaattg tcaccgaaag cttgacgagt
2041 ggctcgtacc cagaattggc ttacgttatc gagaccttag tgcatggaaa caagcatgct
2101 tttatgatcc taaaacaagt aattagccag tgtatttctt attggtttaa catgaaacat
2161 atacttcttt tttgcaacag cttcgagatg atcatgctaa tctctaacca catgggcgac
2221 gaactgatcc cgggagcagc tttcgctcac tacagaaatc ttgtgtcgct aattcgccta
2281 gtgaagagaa caatctctat ctccaacctc aacgagcaac tttgcggcga acctctggtg
2341 aatttcgcca acgcgttgtt cgacggacgt ctgttctgcc cgttcgtcca taccatgccc
2401 agaaacgaca cgaatgcaaa aataacagcg gatgatacac cactgacaca gaacaccgta
2461 agagttagaa attacgaaat atccgatgtg caaagaatga atctaataga ttcaagcgtc
2521 gtctttaccg acaatgacag accatcgaac gaaaccacca tcctgagcga gatattttac
2581 ttctgcgtac tcccggcact atcaaataac aaggcctgtg gcgctggcgt caacgtaaag
2641 gaactagttc tagacttatt ctacacggaa ccgttcatca gtccagatga ttatttccag
2701 gagaatccga ttaccagcga cgttctaatg tctctgatcc gagaaggtat gggccctggc
2761 tacaccgtag ccaacacatc ctgtatcgca aaacagttgt ttaaatcgct aatctacatt
2821 aatgaaaata cgaaaatatt ggaagtggaa gtctccttag atcccgcgca gcgacacggc
2881 aactccgttc attttcaatc actacaacac attctataca acgggctttg cctgatctca
2941 ccgatcacca ccctaagacg gtactatcaa ccaatcccat ttcatcgatt cttctccgac
3001 ccgggaatct gcggcaccat gaatgctgat atccaagttt tcctaaatac atttcctcac
3061 tgtcaaagaa acgacggcgg ttttcctctc ccgcccccat tagcattaga attttataat
3121 tggcaacgaa caccgttttc cgtgtactca gccttctgcc ccaattccct gttgagcatt
3181 atgacgcttg ccgccatgca ctcaaaattg tctcccgttg ccatagcgat ccaaagcaaa
3241 aacaaaatcc atccgggctt tgcggccaca ctagtccgga cggataattt cgacgtcgag
3301 tgcctattat acagttccag agcagccaca tctataattt tagacgatcc cacggtcacc
3361 gcggaagcta aagatatcgc aaccacttac aacttcaccc agcacctaag ttttgtagat
3421 atgggcttag gttttagctc taccaccgcc actgccaatc ttaagcgaat taaatcagat
3481 atggggagca agatacaaaa ccttttctcc gccttcccga tacacgcgtt taccaacgcg
3541 gacataaata cgtggattcg acatcacgtc gggatagaaa aacctaatcc ctccgagagc
3601 gaagcactaa acatcataac gttcggcgga attaacaaaa acccaccctc catactactg
3661 catggtcaac aagctatctg cgaagttata ctgaccccgg ttacgacaaa cattaacttt
3721 ttcaaatcgc cccacaaccc aagaggcagg gaatcatgta tgatgggaac ggacccgcac
3781 aacgaagagg cggctagaaa agcattgtac gaccacaccc aaacagacag cgatacattc
3841 gccgcaacca caaacccttg ggcatctcta ccaggctcct taggcgatat tctatacaac
3901 acggcacaca gagaacaact atgttacaac cccaagacat acagtcccaa cgctcaattt
3961 tttaccgaat ctgacatctt aaaaacaaac aagatgatgt acaaagtgat aagcgaatac
4021 tgcatgaaat cgaactcgtg tttaaacagc gatagcgaaa tacaatactc gtgctctgag
4081 ggcacggata gcttcgtaag cagaccatgc cagttcttac aaaacgctct gcctcttcac
4141 tgttcatcca accaagctct attagagagt cggtctaaaa ccggcaatac gcagatcagc
4201 gaaacccatt attgtaatta cgccatagga gaaaccatac ctttccaact cattatcgaa
4261 tcatccatat aaaatggaaa ccgtctactg cactttcgat cacaaactgt cactttccga
4321 tatcagcacc ctatgcaagc tcatgaacat cgtcataccg atcccagctc accaccatct
4381 aataggtagc ggcaatttag gtctttatcc catcgtctcc tccaacaaag attacgtcca
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