GenBank-Updates@genbank.bio.net (08/16/90)
LOCUS HS6MCP 4440 bp ds-DNA VRL 16-AUG-1990 DEFINITION Human herpesvirus type 6 major capsid protein (MCP) gene, complete cds. ACCESSION M33515 KEYWORDS major capsid protein. SOURCE Human herpesvirus type 6 DNA. ORGANISM Human herpesvirus type 6 Viridae; ds-DNA enveloped viruses; Herpesviridae; Alphaherpesvirinae. REFERENCE 1 (bases 1 to 4440) AUTHORS Littler,E., Lawrence,G., Liu,M.-Y., Barrell,B.G. and Arrand,J.R. TITLE Identification, cloning, and expression of the major capsid protein gene of human herpesvirus 6 JOURNAL J. Virol. 64, 714-722 (1990) STANDARD simple staff_review FEATURES from to/span description pept 235 4272 major capsid protein (MCP) BASE COUNT 1422 a 1169 c 785 g 1064 t ORIGIN 1 tatcgtgaac gatatttggc ccggacgttt gaaaaatttt ctctatgatt gactcgatct 61 tttccagaac tacaggcatg gatcgcgcta aacgagtttc ctcgtcgcga gacacttcag 121 cggtcagatc acacgaatct ataaaaactg gaatcgaccg tgcacaagtg gaaccaaaac 181 atgaattaac tattaaagtt tcacaattac cggtgtgctg cataacgccg aaacatggaa 241 aattggcagg cgaccgaaat tttacctaag atcgaagcac ctctaaatat tttcaatgac 301 attaaaacat acacagccga acaacttttt gacaatttgc gaatttattt cggtgacgat 361 ccgagccgtt acaacatcag ttttgaagcc ttactcggaa tctactgcaa caaaatagaa 421 tggattaact ttttcaccac gccgatcgcc gttgcagcga acgtaatccg cttcaatgat 481 gtgagtcgaa tgaccctcgg gaaggttctc ttctttattc aattacctag agtcgctaca 541 ggaaacgacg taactgcttc aaaagaaacc accatcatgg tagccaaaca ctcagaaaaa 601 caccccataa acatatcgtt cgatttgagc gctgcctgtc tggaacatct ggaaaacaca 661 tttaaaaaca cagtcatcga tcagatttta aacatcaatg cgttacatac agtcttaaga 721 tctttaaaga attcagccga ttcgctcgag cgaggtttga ttcacgcatt catgcaaacc 781 ttattgagaa aatctccccc gcaatttatc gtcctgacca tgaatgagaa caaagtacat 841 aataaacaag ctctgagccg agtacagcgc agcaacatgt ttcagagcct gaagaacaga 901 ttgttaacgt cattattttt tttgaacagg aataataata tttcatatat ctatagaatt 961 ctaaacgaca tgatggaatc ggtcacggaa agcattctaa atgatacgaa caactacact 1021 tccaaagaaa acgtccccct agatggtgtt ttattaggac cgatcggctc tatccaaaaa 1081 ctcaccagca tactctccca gtacatctcc acacaagtcg tctccgcccc aatctcatat 1141 ggtcacttta ttatgggcaa agaaaacgca gtgactgcga ttgcataccg tgcaatcatg 1201 gccgatttta ctcaattcac cgtgaacgcc gggacagaac aacaagacac taacaacaaa 1261 tcagaaatct tcgacaaaag ccgcgcgtac gccgacctaa agctgaacac gttgaaattg 1321 ggagataaat tagtcgcatt cgaccaccta cacaaagttt acaaaaacac agacgtcaac 1381 gatccgctag aacagagctt acaactaaca ttctttttcc ctttgggtat ctacataccg 1441 agcgagaccg gtttcagtac aatggaaaca cgtgtgaaat taaacgacac catggaaaac 1501 aacctaccca ccagcgtttt tttccacaat aaagaccaag tcgtgcagcg aattgatttt 1561 gccgacatat taccgtcggt ttgccatccc attgtccacg actcgaccat cgtcgaacga 1621 ctcatgaaaa gcgaaccatt gcctaccggc caccgctttt cccaactatg tcaactaaaa 1681 attacccgag aaaacccagc caggatctta cagaccttat acaacttata cgaaagtcga 1741 caagaagtac ccaaaaacac caacgtctta aaaaacgaat taaacattga agatttttac 1801 aaaccggaca atccaacact gccgaccgaa agacacccct tcttcgatct cacgtatatc 1861 cagaaaaacc gagccacaga agtactctgc acaccaagaa taatgatagg caacatacct 1921 ttaccgttag ctccagtctc tttccacgaa gcccgtacaa atcaaatact ggaacatgca 1981 aagacgaact gccaaaagta cgacttcacc ctcaaaattg tcaccgaaag cttgacgagt 2041 ggctcgtacc cagaattggc ttacgttatc gagaccttag tgcatggaaa caagcatgct 2101 tttatgatcc taaaacaagt aattagccag tgtatttctt attggtttaa catgaaacat 2161 atacttcttt tttgcaacag cttcgagatg atcatgctaa tctctaacca catgggcgac 2221 gaactgatcc cgggagcagc tttcgctcac tacagaaatc ttgtgtcgct aattcgccta 2281 gtgaagagaa caatctctat ctccaacctc aacgagcaac tttgcggcga acctctggtg 2341 aatttcgcca acgcgttgtt cgacggacgt ctgttctgcc cgttcgtcca taccatgccc 2401 agaaacgaca cgaatgcaaa aataacagcg gatgatacac cactgacaca gaacaccgta 2461 agagttagaa attacgaaat atccgatgtg caaagaatga atctaataga ttcaagcgtc 2521 gtctttaccg acaatgacag accatcgaac gaaaccacca tcctgagcga gatattttac 2581 ttctgcgtac tcccggcact atcaaataac aaggcctgtg gcgctggcgt caacgtaaag 2641 gaactagttc tagacttatt ctacacggaa ccgttcatca gtccagatga ttatttccag 2701 gagaatccga ttaccagcga cgttctaatg tctctgatcc gagaaggtat gggccctggc 2761 tacaccgtag ccaacacatc ctgtatcgca aaacagttgt ttaaatcgct aatctacatt 2821 aatgaaaata cgaaaatatt ggaagtggaa gtctccttag atcccgcgca gcgacacggc 2881 aactccgttc attttcaatc actacaacac attctataca acgggctttg cctgatctca 2941 ccgatcacca ccctaagacg gtactatcaa ccaatcccat ttcatcgatt cttctccgac 3001 ccgggaatct gcggcaccat gaatgctgat atccaagttt tcctaaatac atttcctcac 3061 tgtcaaagaa acgacggcgg ttttcctctc ccgcccccat tagcattaga attttataat 3121 tggcaacgaa caccgttttc cgtgtactca gccttctgcc ccaattccct gttgagcatt 3181 atgacgcttg ccgccatgca ctcaaaattg tctcccgttg ccatagcgat ccaaagcaaa 3241 aacaaaatcc atccgggctt tgcggccaca ctagtccgga cggataattt cgacgtcgag 3301 tgcctattat acagttccag agcagccaca tctataattt tagacgatcc cacggtcacc 3361 gcggaagcta aagatatcgc aaccacttac aacttcaccc agcacctaag ttttgtagat 3421 atgggcttag gttttagctc taccaccgcc actgccaatc ttaagcgaat taaatcagat 3481 atggggagca agatacaaaa ccttttctcc gccttcccga tacacgcgtt taccaacgcg 3541 gacataaata cgtggattcg acatcacgtc gggatagaaa aacctaatcc ctccgagagc 3601 gaagcactaa acatcataac gttcggcgga attaacaaaa acccaccctc catactactg 3661 catggtcaac aagctatctg cgaagttata ctgaccccgg ttacgacaaa cattaacttt 3721 ttcaaatcgc cccacaaccc aagaggcagg gaatcatgta tgatgggaac ggacccgcac 3781 aacgaagagg cggctagaaa agcattgtac gaccacaccc aaacagacag cgatacattc 3841 gccgcaacca caaacccttg ggcatctcta ccaggctcct taggcgatat tctatacaac 3901 acggcacaca gagaacaact atgttacaac cccaagacat acagtcccaa cgctcaattt 3961 tttaccgaat ctgacatctt aaaaacaaac aagatgatgt acaaagtgat aagcgaatac 4021 tgcatgaaat cgaactcgtg tttaaacagc gatagcgaaa tacaatactc gtgctctgag 4081 ggcacggata gcttcgtaag cagaccatgc cagttcttac aaaacgctct gcctcttcac 4141 tgttcatcca accaagctct attagagagt cggtctaaaa ccggcaatac gcagatcagc 4201 gaaacccatt attgtaatta cgccatagga gaaaccatac ctttccaact cattatcgaa 4261 tcatccatat aaaatggaaa ccgtctactg cactttcgat cacaaactgt cactttccga 4321 tatcagcacc ctatgcaagc tcatgaacat cgtcataccg atcccagctc accaccatct 4381 aataggtagc ggcaatttag gtctttatcc catcgtctcc tccaacaaag attacgtcca //