GenBank-Updates@genbank.bio.net (08/17/90)
LOCUS ECOSPOT 3171 bp ds-DNA BCT 17-AUG-1990 DEFINITION E.coli spoT gene encoding (p)ppGpp 3'-pyrophosphohydrolase, omega (rpoZ) protein genes, complete cds. ACCESSION M24503 J04976 KEYWORDS (p)ppGpp 3'-pyrophosphohydrolase; SpoT protein; spoT gene. SOURCE E.coli (strain K-12) DNA, clone pGA1. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 3171) AUTHORS Sarubbi,E., Rudd,K.E., Xiao,H., Ikehara,K., Kalman,M. and Cashel,M. TITLE Characterization of the spoT gene of Escherichia coli JOURNAL J. Biol. Chem. 264, 15074-15082 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [1] kindly provided by M.Cashel, 09-MAY-1989. FEATURES from to/span description pept 67 342 omega protein pept 361 2469 (p)ppGpp 3'-pyrophosphohydrolase (ttg start) ORF 2476 3165 ORF3 ORF 2934 880 (c) ORF4 BASE COUNT 784 a 850 c 857 g 680 t ORIGIN 82 minutes on K12 map. 1 ttggcagact gaacctgatt tcagtatcat gcccagtcat ttcttcacct gtggagcttt 61 ttaagtatgg cacgcgtaac tgttcaggac gctgtagaga aaattggtaa ccgttttgac 121 ctggtactgg tcgccgcgcg tcgcgctcgt cagatgcagg taggcggaaa ggatccgctg 181 gtaccggaag aaaacgataa aaccactgta atcgcgctgc gcgaaatcga agaaggtctg 241 atcaacaacc agatcctcga cgttcgcgaa cgccaggaac agcaagagca ggaagccgct 301 gaattacaag ccgttaccgc tattgctgaa ggtcgtcgtt aatcacaaag cgggtcgccc 361 ttgtatctgt ttgaaagcct gaatcaactg attcaaacct acctgccgga agaccaaatc 421 aagcgtctgc ggcaggcgta tctcgttgca cgtgatgctc acgaggggca aacacgttca 481 agcggtgaac cctatatcac gcacccggta gcggttgcct gcattctggc cgagatgaaa 541 ctcgactatg aaacgctgat ggcggcgctg ctgcatgacg tgattgaaga tactcccgcc 601 acctaccagg atatggaaca gctttttggt aaaagcgtcg ccgagctggt agagggggtg 661 tcgaaacttg ataaactcaa gttccgcgat aagaaagagg cgcaggccga aaactttcgc 721 aagatgatta tggcgatggt gcaggatatc cgcgtcatcc tcatcaaact tgccgaccgt 781 acccacaaca tgcgcacgct gggctcactt cgcccggaca aacgtcgccg catcgcccgt 841 gaaactctcg aaatttatag cccgctggcg caccgtttag gtatccacca cattaaaacc 901 gaactcgaag agctgggttt tgaggcgctg tatcccaacc gttatcgcgt aatcaaagaa 961 gtggtgaaag ccgcgcgcgg caaccgtaaa gagatgatcc agaagattct ttctgaaatc 1021 gaagggcgtt tgcaggaagc gggaataccg tgccgcgtca gtggtcgcga gaagcatctt 1081 tattcgattt actgcaaaat ggtgctcaaa gagcagcgtt ttcactcgat catggacatc 1141 tacgctttcc gcgtgatcgt caatgattct gacacctgtt atcgcgtgct gggccagatg 1201 cacagcctgt acaagccgcg tccgggccgc gtgaaagact atatcgccat tccaaaagcg 1261 aacggctatc agtctttgca cacctcgatg atcggcccgc acggtgtgcc ggttgaggtc 1321 cagatccgta ccgaagatat ggaccagatg gcggagatgg gtgttgccgc gcactgggct 1381 tataaagagc acggcgaaac cagtactacc gcacaaatcc gcgcccagcg ctggatgcaa 1441 agcctgctgg agctgcaaca gagcgccggt agttcgtttg aatttatcga gagcgttaaa 1501 tccgatctct tcccggatga gatttacgtt ttcacaccgg aagggcgcat tgtcgagctg 1561 cctgccggtg caacgcccgt cgacttcgct tatgcagtgc ataccgatat cggtcatgcc 1621 tgcgtgggcg cacgcgttga ccgccagcct tacccgctgt cgcagccgct taccagcggt 1681 caaaccgttg aaatcattac cgctccgggc gctcgcccga atgccgcttg gctgaacttt 1741 gtcgttagct cgaaagcgcg cgccaaaatt cgtcagttgc tgaaaaacct caagcgtgat 1801 gattctgtaa gcctgggccg tcgtctgctc aaccatgctt tgggtggtag ccgtaagctg 1861 aatgaaatcc cgcaggaaaa tattcagcgc gagctggatc gcatgaagct ggcaacgctt 1921 gacgatctgc tggcagaaat cggacttggt aacgcaatga gcgtggtggt cgcgaaaaat 1981 ctgcaacatg gggacgcctc cattccaccg gcaacccaaa gccacggaca tctgcccatt 2041 aaaggtgccg atggcgtgct gatcaccttt gcgaaatgct gccgccctat tcctggcgac 2101 ccgattatcg cccacgtcag ccccggtaaa ggtctggtga tccaccatga atcctgccgt 2161 aatatccgtg gctaccagaa agagccagag aagtttatgg ctgtggaatg ggataaagag 2221 acggcgcagg agttcatcac cgaaatcaag gtggagatgt tcaatcatca gggtgcgctg 2281 gcaaacctga cggcggcaat taacaccacg acttcgaata ttcaaagttt gaatacggaa 2341 gagaaagatg gtcgcgtcta cagcgccttt attcgtctga ccgctcgtga ccgtgtgcat 2401 ctggcgaata tcatgcgcaa aatccgcgtg atgccagacg tgattaaagt cacccgaaac 2461 cgaaattaat gttttatgaa cccaacacgt tatgcacgca tctgcgaaat gctcgccagg 2521 cggcagcctg atctgaccgt ctgcatggag caggtccaca aacctcataa cgtttctgcg 2581 attattcgta ccgcagatgc cgttggcgta catgaagttc acgccgtctg gcctggtagc 2641 cgcatgcgca ccatggcttc ggcagcggcg ggtagtaaca gctgggtaca ggtgaaaaca 2701 caccgcacca ttggcgatgc cgtcgctcat ctcaaaggcc agggcatgca gattctggca 2761 acccatcttt ctgataacgc tgtcgatttc cgcgaaattg attacactcg cccgacctgc 2821 attttgatgg gacaggagaa aacgggcatc acgcaggaag cattggccct ggcggatcag 2881 gacatcatca ttccgatgat cggcatggtg cagtcgctga atgtttccgt tgcctcagcc 2941 ctcattcttt acgaagccca gcgtcagcgg caaaatgcag gcatgtacct gcgtgaaaac 3001 agcatgttgc cggaagcaga gcaacaacgc ctgttgtttg aaggcggcta tccggtgctg 3061 gcgaaagtcg caaaacgcaa aggcctgcct tatccccacg tcaatcagca aggcgagatc 3121 gaagctgatg ccgactggtg ggctactatg caggctgcag ggtaagtgcc a //