GenBank-Updates@genbank.bio.net (08/21/90)
LOCUS RATCRYGF 6369 bp ds-DNA ROD 21-AUG-1990
DEFINITION Rat gamma-F-crystallin (gamma 4-1) gene, complete cds.
ACCESSION M19357 M19358 M19354
KEYWORDS .
SOURCE Rattus norvegicus DNA.
ORGANISM Rattus norvegicus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (sites)
AUTHORS den Dunnen,J.T., van Neck,J.W., Cremers,F.P.M., Lubsen,N.H. and
Schoenmakers,J.G.G.
TITLE Nucleotide sequence of the rat gamma-crystallin gene region and
comparison with an orthologous human region
JOURNAL Gene 87, 225-232 (1990)
STANDARD full staff_entry
REFERENCE 2 (bases 1 to 6369; for [1])
AUTHORS den Dunnen,J.T., van Neck,J.W., Cremers,F.P.M., Lubsen,N.H. and
Schoenmakers,J.G.G.
JOURNAL Unpublished (1988)
STANDARD full staff_entry
COMMENT Draft entry and computer-readable sequence [1] kindly submitted by
J.G.G. Schoenmakers 23-MAY-1988.
FEATURES from to/span description
pept 2779 2787 gamma-F-crystallin, exon 1
2875 3117 gamma-F-crystallin, exon 2
4512 4784 gamma-F-crystallin, exon 3
pre-msg 2742 4848 CRY-F mRNA+introns
IVS 2788 2874 CRY-F intron A
IVS 3118 4511 CRY-F intron B
BASE COUNT 1673 a 1380 c 1390 g 1695 t 231 others
ORIGIN
1 agctgcctta gngttatgtg tgtcctgagt cgccaggcag gtcacttgga gcagaaaagt
61 tagtctcacc tctggtcttg ggcctgaagt cgctcctcgg ggctgctttc agctctcagt
121 gagggaagca accagaangc cctgccccta ctgctcctag gtccctgtgc acacggggct
181 cagatggcac taggcatttt cctttagagt taggaatgtg tacagagagt agtctcctct
241 ctttctcttt atttttgtct attgttttaa agttggaaag gcttttagtt tagcatatat
301 ttagcatata actgatgagg aaatttctgt atgtgtgttt cacagtctgc atgacacggc
361 tgccatgtca aacttatttt gaatggaatt gccttacact gttttctgtc atagataaaa
421 atgctataaa tgaaatgaaa gagaaccatt gtcatactaa atacaaaatc aaattataga
481 tctgaggcct atatttttta aaaggttgct atattttaga agttaaaagt tatgagtaga
541 gttggttttt tatttttgtt tactgtgtat tttacttagt ctaacacaca aaatattctt
601 tatacattaa atttatatta taggaaaata tattaaggga tatttgtgct cttcatactg
661 agtctttaga tctnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
781 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
841 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnat
901 attatcttct tttagtccta caggaaagga aggttctttc cccatctttt ctaattgtta
961 agggctgcgg ctgtagctta gccaggagca acagcttaac ttgtaagagg ccctgacact
1021 caacctccaa tacactattt gctttcagct cttggaagaa tttatttcaa aaggattctg
1081 cttagcacaa agctctgtag ttagaaagtt ggcaggggag tggaagttgt agcagcacca
1141 taaccacgtg cactctaaaa taagcaaacc agtaagccct taattcatag tcaaacaatg
1201 gctacagaga actatttaga aatcgttaac aaaggtgttc gaactgaagt cagcatccag
1261 aacagaccat gcatctgcag acattccctg ggcttatctc tttgccagca gtctaggctg
1321 cgtctggggc tctttctcca tcacttactg ctcagaccct ttctgcccat gtctccctcg
1381 ttcttactgt ccttgttaca ctgtaatgac atactttttt gagacgtttt cagccatagg
1441 tcattagacc tgctactctt ctttctccat agacttttcc gtcttatgaa taaattttta
1501 tctgtcccag gaaatatata cacacatagg taataatttc attacatact gcaataaatg
1561 gacaatgtat tttaattatg aagagtatta ggagtctaca aaggggcttg atgtatttct
1621 tcttaagatg taattttagt aggtaaaaca ctattttcta gtaagacggt atagaaaaca
1681 catgagatgg tctgtttaat tgagaggaaa ctgcttcctc caacagcact ctgagtggca
1741 ttggttaatg ttaagctaac actgaacatg gattaagcac agggagtact tagagaacag
1801 tggtttgcta cccttcccct gtgcacactc tgcagtgact caacgttaag ggttgccatg
1861 acttgggaac tgagaaagag aatatattgg aggtgcaaat ggacagaggc ccagagacta
1921 ccaaacaacc cacaggtcac aacagtcccc atactgtttt ctgcctgaaa tgccacaata
1981 gcacagtgtg gttggagcac ccagggtggt caggatgatg ggggtgactg tggggtaggg
2041 agaagagacc agcctaggag acagaaccta aaccactgta caagcagtcc ttgctcccct
2101 gaaacagcag aaaagacatg ctgtaaaccc gagatttcaa acgtatctgc gcgttgttca
2161 catgcatcaa gaaattcctg gtagggtctc agcttcaggg agcaaagctg agctcctgtt
2221 gcatcagagc ttcctggcag ttcacctctg ttgccccccc cccccattac ttatctgatt
2281 ctcatgccac ttggagcaca attaggcgaa ggtacagcca tccctgcctt ccatgattgc
2341 agcagttcag cagcctaaaa gcctcaagct ccatgggtca gcaagatccc atcgtcatca
2401 tgcactgtta ttcaaagtct cttagtttgg gaattataaa ccacttaact acaaaggttg
2461 actagttaag catctttact taatttcaat ttcccagata ggcatcattt aaagacccag
2521 gctgcatcaa gtgacccttt taaccaggtc agtgattcgt catctattcg aagctctgga
2581 agtctaagaa aaaacataca ataacccaca cctcccccac agtcattata tagaaaagag
2641 agagaaaaac gtgccctgtc ccaccgcggg ccccttttgt gctgttcctg ccaacgcagc
2701 agacctcctg ctatatatat agaccctgct cccagcccta cacaaccaac agcaccatcc
2761 catccgcaaa caccagccat gggaaaggtg agcctagggc gcccagaacg tggggaggga
2821 cttactcctg ggtccagacc acatcaggcc tctgacccct gccttgcctt acagatcacc
2881 ttctatgagg accgaggctt ccagggccgc cactatgagt gcagcacaga ccactccaac
2941 ctgcagccct acttcagccg ctgcaactct gtgcgcgtgg acagtggctg ctggatgctc
3001 tatgagcagc ccaacttcac aggctgccag tatttccttc gtcgcgggga ctaccctgac
3061 taccagcagt ggatgggttt cagcgactct gtccgctcct gccacctcat cccccacgtg
3121 agtcccatcc tagggccccc tggccctcat tctcattctt gccctgatca taaccctact
3181 ttgagctgag ggatagggtg cctgacacgt tctttgaggg gtttctctag gattaggaaa
3241 aatggcacaa gcctttgaaa ttcgaaagct cctaaatgta cctgtaacag gctgtgagaa
3301 ctgcttttca gttttcctat ataacagaaa tggttagcag gccttaaaga aaaagaaagg
3361 atagttagag gggtttgtgt gactcgaact ttcgcaggat ttccaccaat ccgtgactta
3421 cgtggcatcg ccagccatta tttaactttt ggtgagtcct ggtgtgccag cctctgtaaa
3481 ggtcacatct tggctgcata ctcaagttct ggaagctaca atactttgga tgcacggagg
3541 atgggacttt tccagcagct gctctctcct caaactgttg ctttggagaa tccttcccac
3601 agaggacttc cagtggtgga agaggacact ggagcagact tctaggaaag gacaggaagt
3661 gaaggagatc aagctaacag agtgggcagg acaggcagct ccaacgtcca ttgctagaaa
3721 aattttaccc tcttgatctg cacaggcctc ttgagaatat ttgacttctt tttttggttt
3781 tacaaacgtg atttgtcaga atacattaga gctgagagtt gaacttcatt ctttagttca
3841 tttatttaca ttttgtttgc tggtgtttac atggcttctc gggatgcacc caaacttcct
3901 atgtatgtag actggcctcc aactctgaca cttgaaattt ttcttacccc tgcctcctaa
3961 gggctaagac tacaggcatt caccacatct ccctttagac ctaaattttg agatgacctt
4021 gagccccagg tttaaaaaca aggcctgata gcaatgaata gcctagtaag agcaccagtg
4081 gaagggaaag cccttggtcc tgccaagact gaacacctag tgaacttgat tgttgggggg
4141 agggtggtag tggggggggg atagggaggg gaagcccata tagaagggga ggaggagggg
4201 ttagggggat gttgacccgg aaaccgggaa ggggaataac aatcgaaatg taaattagaa
4261 atactcaagt tagtatatat atataccaga gcctgaaaga aaataggttg tgtaactcga
4321 actttcgcag gatttccacc aatctgtgac ttacatggca ttgacagcca ctatttacct
4381 ttttaaattt agtcactttc agcatagaaa aaatagggca caacactccc ctcccaggca
4441 catgtgctgg attggcaaac ttaggtcagg ttttctgaca tcctcttctt tactgttcct
4501 tggacgcaca gtccagctct cacagaatca ggatctacga gcgagaggac tacagaggcc
4561 agatggtgga gatcacagac gactgccccc acctgcagga ccgcttccac ttcagtgact
4621 tccactcctt ccacgtgata gagggctact gggtcctcta cgagatgccc aactaccggg
4681 ggcggcagta cctgctgagg cccagagaat acaggcgcta ccacgactgg ggcgccatga
4741 atgccagggt gggctctctg aggagaatca tggattacta ttgaattgtc ttactctgcc
4801 ctttcatcat ttggaagtta ataaaatatt tcctgtgtgt tccatgcagc aatggtgtcc
4861 tctgttcatt ttggccttct tggaaggctg cagtaaaact ggcaacagga agactgtggg
4921 tcttcttata atcaagggag gtcgtgggct gagcagatgg ggagctcagc ctcaggaacc
4981 tgggccccaa tcactgacta gctacttgtg gtagggcaag catttccgta cctcagtttc
5041 ctactttgtg aagacaggag taataatagt ctattaatga ggctttgatg tgaactaacc
5101 gtgtttacat ttttctatca cggacgatgg ctttgtcaac agtgtcctgg aagctgtcct
5161 gtgagtgatc acgtggagca tttgctcttg tagtactaat gttcatcaat cctgaaatgc
5221 caatcaggag ttgatctgat gcaatcacac cagggtcttt aattacaaac tgaactcacc
5281 cacaggatgg ttctaatgga gaaaaagccc tgaccactca tcaggacaag ggagaggtga
5341 gtgtttctag tctggccagg atctaattgg ggtgctactg tggccttagc ataattggtt
5401 ggtgctggga gatcaaccat aaacctaact tctgcttccc tcctaattag tggtaggggt
5461 cagacttgta acctgcaaat ttgttaggga ataacttgga aactggtgct agatgcagga
5521 tttgttgggg aaataacctg gcgactcagg tcttactggg tagttacctg gaaactgaag
5581 ctagatacag acctgttagt tcacttaagt ccggttttat aaagtgaagt ctgaacacca
5641 aaactttggt ctcttactct caacttcagt gctctgactt aaaactattt ggaggtgatt
5701 gaataaaggg gaatgactaa gtaaaactgt atcagtggaa gaaagagtta gagacccatt
5761 tgtttgcaca gtcatgtctg acacatccca aaaggactaa aactatacta ctgaagagat
5821 gtatatatgt tatgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg cacgcgcatt
5881 atgctgagag cacagattta ggaaccaagg accttcttaa aagaagccaa aggactttgt
5941 gaaaactcgt ttctgttgga gctgcactgc agtcggtgac gtgagttgat agaaacaagc
6001 acacatcctg catgagtaaa ggctgagagc acatggttag aaatgcaaaa ctcacaagca
6061 tatcagagac ctgaaagata ttatcccaaa ctgggatcta tatttgtgac acagagctca
6121 ccaatagctt ttggtgacta ttttgtccct aagacaaggg aaaaggaatg taggtgcttg
6181 tttacagaag ctcaagatga ctttacagca aggaaacaag gagtcatgaa atgaaatcaa
6241 agcagtgtta gcatttcctc tagggtatac ccagcagttt cctagcaaca accagagtca
6301 ggtatgctat aaaggntgtt caggcttctg tccctctccc tctcccnccc catnccttcc
6361 tccncccct
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