GenBank-Updates@genbank.bio.net (08/18/90)
LOCUS HUMIGHHSG4 892 bp ds-DNA PRI 18-AUG-1990
DEFINITION Human mutant germline Ig H-chain DNA with a deletion of IgG1, IgG2,
IgG4 and IgA1, clone pBR0.9cos4.
ACCESSION M25383 J03079 M29705
KEYWORDS alpha-immunoglobulin; constant region; gamma-immunoglobulin;
immunoglobulin heavy chain; minisatellite repeat; switch region.
SOURCE Human (TOU and HASS families) cell line EZZ DNA, clone pBR0.9cos4.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 892)
AUTHORS Keyeux,G., Lefranc,G. and Lefranc,M.-P.
TITLE A multigene deletion in the human IGH constant region locus
involves highly homologous hot spots of recombination
JOURNAL Genomics 5, 431-441 (1989)
STANDARD full staff_entry
COMMENT Draft entry and computer-readable sequence for [1] kindly provided
by M.-P.Lefranc, 08-JUN-1989.
FEATURES from to/span description
site 64 71 chi sequence
site 146 155 core of hypervariable minisatellite
site 165 174 core of hypervariable minisatellite
site 14 18 switch sequence repeat pentanucleotide
site 46 49 switch sequence repeat tetranucleotide
site 69 73 switch sequence repeat pentanucleotide
site 144 148 switch sequence repeat pentanucleotide
site 169 172 switch sequence repeat tetranucleotide
site 315 318 switch sequence repeat tetranucleotide
site 324 328 switch sequence repeat pentanucleotide
site 343 347 switch sequence repeat pentanucleotide
site 441 445 switch sequence repeat pentanucleotide
site 452 455 switch sequence repeat tetranucleotide
site 525 528 switch sequence repeat tetranucleotide
site 785 788 switch sequence repeat tetranucleotide
rpt 815 821 direct repeat copy A
rpt 822 828 direct repeat copy B
BASE COUNT 214 a 216 c 215 g 247 t
ORIGIN 1 bp upstream of BamHI site; chromosome 14q32.
1 ggatccacca ttctggggtc tggaggacag tggccccctt cccacagctc cactaggcag
61 tgccctggtg gggacattat atgggggttc aaccacattc tctttggcac tgctctagta
121 gaggttctct gtgagggctc catgctggca ggaggcttct gtctgggcag ctaggctttc
181 tcatacattt ctgaaatcta gagggaagat gccaagcctc cttcactctt gcattctggg
241 gtcctacagg cttaacacca gatggaagtc accaaggctt atagtggctt gcactctcca
301 aagaagcagc ctaagctgta cttggggccc tttgagccaa ggctggagcc agaggaacca
361 ggatgtggag agcagtgtcc caaggctgca caggcagagt ggccatggcc atggccacaa
421 aacatctttc ctcttggcct ctgggctgtg atgggaaaga ccacctcaga gatttccaaa
481 atgccttcaa ggcctttttc cctttgttct ggatatgagc acttagctcc cttttagtta
541 tgctaatctc tctagcaact ggctgctcca tagcctactt atatttgtct cctgaaaata
601 ccttttcttt tctaccacat ggccaggcat gaattttcca aattttttat gctctgcttc
661 cctttgttga cgaaaaaagc caaactctat aaaacacttg acgagattga ttctgagcca
721 aatctgagag ccatgaactg tggcacagcc tcaaaaggtc ctgagaacac ctgtgcaagg
781 tgcttgggtt gcggcctggt tttatgtttt agggagacat cagacatcaa tcaatatatg
841 taaagtatac attagtttgg tttggaatgg caggacattc aagtgggaat tc
//GenBank-Updates@genbank.bio.net (08/21/90)
LOCUS HUMIGHHSG4 892 bp ds-DNA PRI 21-AUG-1990
DEFINITION Human mutant germline Ig H-chain DNA with a deletion of IgG1, IgG2,
IgG4 and IgA1, clone pBR0.9cos4.
ACCESSION M25383 J03079 M29705
KEYWORDS alpha-immunoglobulin; constant region; gamma-immunoglobulin;
immunoglobulin heavy chain; minisatellite repeat; switch region.
SOURCE Human (TOU and HASS families) cell line EZZ DNA, clone pBR0.9cos4.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 892)
AUTHORS Keyeux,G., Lefranc,G. and Lefranc,M.-P.
TITLE A multigene deletion in the human IGH constant region locus
involves highly homologous hot spots of recombination
JOURNAL Genomics 5, 431-441 (1989)
STANDARD full staff_entry
COMMENT Draft entry and computer-readable sequence for [1] kindly provided
by M.-P.Lefranc, 08-JUN-1989.
FEATURES from to/span description
site 64 71 chi sequence
site 146 155 core of hypervariable minisatellite
site 165 174 core of hypervariable minisatellite
site 14 18 switch sequence repeat pentanucleotide
site 46 49 switch sequence repeat tetranucleotide
site 69 73 switch sequence repeat pentanucleotide
site 144 148 switch sequence repeat pentanucleotide
site 169 172 switch sequence repeat tetranucleotide
site 315 318 switch sequence repeat tetranucleotide
site 324 328 switch sequence repeat pentanucleotide
site 343 347 switch sequence repeat pentanucleotide
site 441 445 switch sequence repeat pentanucleotide
site 452 455 switch sequence repeat tetranucleotide
site 525 528 switch sequence repeat tetranucleotide
site 785 788 switch sequence repeat tetranucleotide
rpt 815 821 direct repeat copy A
rpt 822 828 direct repeat copy B
BASE COUNT 214 a 216 c 215 g 247 t
ORIGIN 1 bp upstream of BamHI site; chromosome 14q32.
1 ggatccacca ttctggggtc tggaggacag tggccccctt cccacagctc cactaggcag
61 tgccctggtg gggacattat atgggggttc aaccacattc tctttggcac tgctctagta
121 gaggttctct gtgagggctc catgctggca ggaggcttct gtctgggcag ctaggctttc
181 tcatacattt ctgaaatcta gagggaagat gccaagcctc cttcactctt gcattctggg
241 gtcctacagg cttaacacca gatggaagtc accaaggctt atagtggctt gcactctcca
301 aagaagcagc ctaagctgta cttggggccc tttgagccaa ggctggagcc agaggaacca
361 ggatgtggag agcagtgtcc caaggctgca caggcagagt ggccatggcc atggccacaa
421 aacatctttc ctcttggcct ctgggctgtg atgggaaaga ccacctcaga gatttccaaa
481 atgccttcaa ggcctttttc cctttgttct ggatatgagc acttagctcc cttttagtta
541 tgctaatctc tctagcaact ggctgctcca tagcctactt atatttgtct cctgaaaata
601 ccttttcttt tctaccacat ggccaggcat gaattttcca aattttttat gctctgcttc
661 cctttgttga cgaaaaaagc caaactctat aaaacacttg acgagattga ttctgagcca
721 aatctgagag ccatgaactg tggcacagcc tcaaaaggtc ctgagaacac ctgtgcaagg
781 tgcttgggtt gcggcctggt tttatgtttt agggagacat cagacatcaa tcaatatatg
841 taaagtatac attagtttgg tttggaatgg caggacattc aagtgggaat tc
//