GenBank-Updates@genbank.bio.net (08/18/90)
LOCUS HUMIGHHSG4 892 bp ds-DNA PRI 18-AUG-1990 DEFINITION Human mutant germline Ig H-chain DNA with a deletion of IgG1, IgG2, IgG4 and IgA1, clone pBR0.9cos4. ACCESSION M25383 J03079 M29705 KEYWORDS alpha-immunoglobulin; constant region; gamma-immunoglobulin; immunoglobulin heavy chain; minisatellite repeat; switch region. SOURCE Human (TOU and HASS families) cell line EZZ DNA, clone pBR0.9cos4. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 892) AUTHORS Keyeux,G., Lefranc,G. and Lefranc,M.-P. TITLE A multigene deletion in the human IGH constant region locus involves highly homologous hot spots of recombination JOURNAL Genomics 5, 431-441 (1989) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly provided by M.-P.Lefranc, 08-JUN-1989. FEATURES from to/span description site 64 71 chi sequence site 146 155 core of hypervariable minisatellite site 165 174 core of hypervariable minisatellite site 14 18 switch sequence repeat pentanucleotide site 46 49 switch sequence repeat tetranucleotide site 69 73 switch sequence repeat pentanucleotide site 144 148 switch sequence repeat pentanucleotide site 169 172 switch sequence repeat tetranucleotide site 315 318 switch sequence repeat tetranucleotide site 324 328 switch sequence repeat pentanucleotide site 343 347 switch sequence repeat pentanucleotide site 441 445 switch sequence repeat pentanucleotide site 452 455 switch sequence repeat tetranucleotide site 525 528 switch sequence repeat tetranucleotide site 785 788 switch sequence repeat tetranucleotide rpt 815 821 direct repeat copy A rpt 822 828 direct repeat copy B BASE COUNT 214 a 216 c 215 g 247 t ORIGIN 1 bp upstream of BamHI site; chromosome 14q32. 1 ggatccacca ttctggggtc tggaggacag tggccccctt cccacagctc cactaggcag 61 tgccctggtg gggacattat atgggggttc aaccacattc tctttggcac tgctctagta 121 gaggttctct gtgagggctc catgctggca ggaggcttct gtctgggcag ctaggctttc 181 tcatacattt ctgaaatcta gagggaagat gccaagcctc cttcactctt gcattctggg 241 gtcctacagg cttaacacca gatggaagtc accaaggctt atagtggctt gcactctcca 301 aagaagcagc ctaagctgta cttggggccc tttgagccaa ggctggagcc agaggaacca 361 ggatgtggag agcagtgtcc caaggctgca caggcagagt ggccatggcc atggccacaa 421 aacatctttc ctcttggcct ctgggctgtg atgggaaaga ccacctcaga gatttccaaa 481 atgccttcaa ggcctttttc cctttgttct ggatatgagc acttagctcc cttttagtta 541 tgctaatctc tctagcaact ggctgctcca tagcctactt atatttgtct cctgaaaata 601 ccttttcttt tctaccacat ggccaggcat gaattttcca aattttttat gctctgcttc 661 cctttgttga cgaaaaaagc caaactctat aaaacacttg acgagattga ttctgagcca 721 aatctgagag ccatgaactg tggcacagcc tcaaaaggtc ctgagaacac ctgtgcaagg 781 tgcttgggtt gcggcctggt tttatgtttt agggagacat cagacatcaa tcaatatatg 841 taaagtatac attagtttgg tttggaatgg caggacattc aagtgggaat tc //
GenBank-Updates@genbank.bio.net (08/21/90)
LOCUS HUMIGHHSG4 892 bp ds-DNA PRI 21-AUG-1990 DEFINITION Human mutant germline Ig H-chain DNA with a deletion of IgG1, IgG2, IgG4 and IgA1, clone pBR0.9cos4. ACCESSION M25383 J03079 M29705 KEYWORDS alpha-immunoglobulin; constant region; gamma-immunoglobulin; immunoglobulin heavy chain; minisatellite repeat; switch region. SOURCE Human (TOU and HASS families) cell line EZZ DNA, clone pBR0.9cos4. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 892) AUTHORS Keyeux,G., Lefranc,G. and Lefranc,M.-P. TITLE A multigene deletion in the human IGH constant region locus involves highly homologous hot spots of recombination JOURNAL Genomics 5, 431-441 (1989) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly provided by M.-P.Lefranc, 08-JUN-1989. FEATURES from to/span description site 64 71 chi sequence site 146 155 core of hypervariable minisatellite site 165 174 core of hypervariable minisatellite site 14 18 switch sequence repeat pentanucleotide site 46 49 switch sequence repeat tetranucleotide site 69 73 switch sequence repeat pentanucleotide site 144 148 switch sequence repeat pentanucleotide site 169 172 switch sequence repeat tetranucleotide site 315 318 switch sequence repeat tetranucleotide site 324 328 switch sequence repeat pentanucleotide site 343 347 switch sequence repeat pentanucleotide site 441 445 switch sequence repeat pentanucleotide site 452 455 switch sequence repeat tetranucleotide site 525 528 switch sequence repeat tetranucleotide site 785 788 switch sequence repeat tetranucleotide rpt 815 821 direct repeat copy A rpt 822 828 direct repeat copy B BASE COUNT 214 a 216 c 215 g 247 t ORIGIN 1 bp upstream of BamHI site; chromosome 14q32. 1 ggatccacca ttctggggtc tggaggacag tggccccctt cccacagctc cactaggcag 61 tgccctggtg gggacattat atgggggttc aaccacattc tctttggcac tgctctagta 121 gaggttctct gtgagggctc catgctggca ggaggcttct gtctgggcag ctaggctttc 181 tcatacattt ctgaaatcta gagggaagat gccaagcctc cttcactctt gcattctggg 241 gtcctacagg cttaacacca gatggaagtc accaaggctt atagtggctt gcactctcca 301 aagaagcagc ctaagctgta cttggggccc tttgagccaa ggctggagcc agaggaacca 361 ggatgtggag agcagtgtcc caaggctgca caggcagagt ggccatggcc atggccacaa 421 aacatctttc ctcttggcct ctgggctgtg atgggaaaga ccacctcaga gatttccaaa 481 atgccttcaa ggcctttttc cctttgttct ggatatgagc acttagctcc cttttagtta 541 tgctaatctc tctagcaact ggctgctcca tagcctactt atatttgtct cctgaaaata 601 ccttttcttt tctaccacat ggccaggcat gaattttcca aattttttat gctctgcttc 661 cctttgttga cgaaaaaagc caaactctat aaaacacttg acgagattga ttctgagcca 721 aatctgagag ccatgaactg tggcacagcc tcaaaaggtc ctgagaacac ctgtgcaagg 781 tgcttgggtt gcggcctggt tttatgtttt agggagacat cagacatcaa tcaatatatg 841 taaagtatac attagtttgg tttggaatgg caggacattc aagtgggaat tc //