GenBank-Updates@genbank.bio.net (08/21/90)
LOCUS ECOCYOA 5819 bp ds-DNA BCT 21-AUG-1990
DEFINITION E.coli cytochrome o ubiquinol oxidase operon: cyo[A,B,C,D,E]
genes, complete cds.
ACCESSION J05492
KEYWORDS cyoA gene; cyoB gene; cyoC gene; cyoD gene; cyoE gene;
cytochrome o ubiquinol oxidase.
SOURCE E.coli (strain K12) DNA.
ORGANISM Escherichia coli
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Enterobacteriaceae.
REFERENCE 1 (bases 1 to 5819)
AUTHORS Chepuri,V., Lemieux,L., Au,D.C.-T. and Gennis,R.B.
TITLE The sequence of the cyo operon indicates substantial structural
similarities between the cytochrome o ubiquinol oxidase of
Escherichia coli and the aa-3-type family of cytochrome c oxidases
JOURNAL J. Biol. Chem. 265, 11185-11192 (1990)
STANDARD full staff_entry
COMMENT Draft entry and computer-readable [or printed] sequence for [1]
kindly submitted by L.J. Lemieux, 31-JUL-1990.
FEATURES from to/span description
pept 801 1748 cytochrome o ubiquinol oxidase subunit II
(cyoA)
pept 1770 3761 cytochrome o ubiquinol oxidase B subunit I
(cyoB)
pept 3751 4365 cytochrome o ubiquinol oxidase C subunit III
(cyoC)
pept 4365 4694 cyoD gene product
pept 4706 5596 cyoE gene product
BASE COUNT 1239 a 1460 c 1504 g 1616 t
ORIGIN
1 actactgtcg acattctatc tattctccgt cgccgctgcc gtaccagggc ttattttgct
61 gctggtttgc cgccagacgc ttgaatatac acgagtaaat gacaacttta tctcccgtac
121 cgcatatccg gcaggttatg cctttgccat gtggacactg gcggcgggcg tcagcctgtt
181 ggccgtgtgg ttactgctat tgacgatgga cgcgctggat ttgacgcact tctctttcct
241 gcctgctctg ctggaagtcg gggttttagt cgccctttct ggcgtcgtgc ttggtggttt
301 gctggattat ctggcgctac gaaaaacgca tctgacgtaa tctgtaaata ttatttagct
361 gtagtaatca ctcgccgtaa ttattacggc taaataaaca tcagtatcgc ttattaatat
421 ttgttctttt gtgcggctta gcgtttggaa attattggcg ccatttataa attctatttt
481 tcttacacga ttcagctaat gagtctttat tttctcatca cccagttgtc actctaatga
541 taattatttg ttgaataatt gttttatttc acattggtta taccaattgc ccgcccagac
601 tccttcagca ctcccctttt gttataacgc ccttttgcaa cagcttctta aaatcaacct
661 gatatgtttt gccaacatat gtgacctggc agccaaatcc aagtaacagg aatttaatca
721 tgtttacagt aatttaacct tcccgtaaaa tgcccacaca ctttaaacgc caccagatcc
781 cgtggaattg aggtcgttaa atgagactca ggaaatacaa taaaagtttg ggatggttgt
841 cattatttgc aggcactgta ttgctcagtg gctgtaattc tgcgctgtta gatcccaaag
901 gacagattgg tctggagcaa cgttcactga tactgacggc atttggcctg atgttgattg
961 tcgttattcc cgcaatcttg atggctgttg gtttcgcctg gaagtaccgt gcgagcaata
1021 aagatgctaa gtacagcccg aactggtcac actccaataa agtggaagct gtggtctgga
1081 cggtacctat cttaatcatc atcttccttg cagtactgac ctggaaaacc actcacgctc
1141 ttgagcctag caagccgctg gcacacgacg agaagcccat taccatcgaa gtggtttcca
1201 tggactggaa atggttcttc atctacccgg aacagggcat tgctaccgtg aatgaaatcg
1261 ctttcccggc gaacactccg gtgtacttca aagtgacctc caactccgtg atgaactcct
1321 tcttcattcc gcgtctgggt agccagattt atgccatggc cggtatgcag actcgcctgc
1381 atctgatcgc caacgaaccc ggcacttatg acggtatctc cgccagctac agcggcccgg
1441 gcttctcagg catgaagttc aaagctattg caacaccgga tcgcgccgca ttcgaccagt
1501 gggtcgcaaa agcgaagcag tcgccgaaca ccatgtctga catggctgcg ttcgaaaaac
1561 tggccgcgcc tagcgaatac aaccaggtgg aatatttctc caacgtgaaa ccagacttgt
1621 ttgccgatgt aattaacaag tttatggctc acggtaagag catggacatg acccagccag
1681 aaggtgagca cagcgcacac gaaggtatgg aaggcatgga catgagccac gcggaatccg
1741 cccattaaag gggttgagga agaataaaga tgttcggaaa attatcactt gatgcagtcc
1801 cgttccatga acctatcgtc atggttacga tcgctggcat tattttggga ggtctggcgc
1861 tcgttggcct gatcacttac ttcggtaagt ggacctacct gtggaaagag tggctgacct
1921 ccgtcgacca taaacgcctc ggtatcatgt atatcatcgt ggcgattgtg atgttgctgc
1981 gtggttttgc tgacgccatt atgatgcgta gccagcaggc tcttgcctcg gcgggcgaag
2041 cgggcttcct gccacctcac cactacgatc agatctttac cgcgcacggc gtgattatga
2101 tcttcttcgt agcgatgcct ttcgttatcg gtctgatgaa cctggtggtt ccgctgcaga
2161 tcggcgcgcg tgacgttgcg ttcccgttcc tcaacaactt aagcttctgg tttaccgttg
2221 ttggtgtgat tctggttaac gtttctctcg gcgtgggcga atttgcgcag accggctggc
2281 tggcctatcc accgctatcg ggaatagagt acagtccggg agtcggtgtc gattactgga
2341 tatggagtct ccagctatcc ggtataggta cgacgcttac cggtatcaac ttcttcgtta
2401 ccattctgaa gatgcgcgca ccgggcatga ccatgttcaa gatgccagta tttacctggg
2461 catcactgtg cgcgaacgta ctgattattg cttccttccc aattctgacg gttaccgtcg
2521 cgttgttgac cctggatcgc tatctgggca cccatttctt taccaacgat atgggtggca
2581 acatgatgat gtacatcaac ctgatttggg cctggggcca cccggaagtt tacatcctga
2641 tcctgcctgt tttcggtgtg ttctccgaaa ttgcggcaac cttctcgcgt aaacgtctgt
2701 ttggttatac ctcgctggta tgggcaaccg tctgtatcac cgtgctgtcg ttcatcgttt
2761 ggctgcacca cttctttacg atgggtgcgg gcgcgaacgt aaacgccttc tttggtatca
2821 ccacaatgat tatcgccatc ccgaccgggg tgaagatctt caactggctg ttcaccatgt
2881 atcagggccg catcgtgttc cattctgcga tgctgtggac catcggtttt atcgtcacct
2941 tctcggtggg cgggatgact ggcgtgctgc tggccgtacc gggcgcggac ttcgttctgc
3001 ataacagcct gttcctgatt gcgcacttcc ataacgtgat catcggcggc gtggtcttcg
3061 gctgcttcgc agggatgacc tactggtggc ctaaagcgtt cggtttcaaa ctgaacgaaa
3121 cctggggtaa acgcgcgttc tggttctgga tcatcggctt cttcgttgcc tttatgccac
3181 tgtatgcgct gggcttcatg ggcatgaccc gtcgtttgag ccagcagatt gacccgcagt
3241 tccacaccat gctgatgatt gcagccagcg gtgcagtact gattgcgctg ggtattctct
3301 gcctcgttat tcagatgtac gtttctattc gcgaccgcga ccagaaccgt gacctgactg
3361 gcgacccgtg gggtggccgt acgctggagt gggcaacctc ttccccgcct ccgttctata
3421 actttgccgt agtgccgcac gttcacgaac gtgatgcatt ctgggaaatg aaagagaaag
3481 gcgaagcgta taaaaagcct gaccactatg aagaaattca tatgccgaaa aacagcggtg
3541 caggtatcgt cattgcagct ttctccacca tcttcggttt cgccatgatc tggcatatct
3601 ggtggctggc gattgttggc ttcgcaggca tgatcatcac ctggatcgtg aaaagcttcg
3661 acgaggacgt ggattactac gtgccggtgg cagaaatcga aaaactggaa aaccagcatt
3721 tcgatgagat tactaaggca gggctgaaaa atggcaactg atactttgac gcacgcgact
3781 gcccacgcgc acgaacacgg gcaccacgat gcaggcggaa ccaaaatctt cggattttgg
3841 atctacctga tgagcgactg cattctgttc tctatcttgt ttgctaccta tgccgttctg
3901 gtgaacggca ccgcaggcgg cccgacaggt aaggacattt tcgaactgcc gttcgttctg
3961 gttgaaactt tcttgctgtt gttcagctcc atcacctacg gcatggcggc tatcgccatg
4021 tacaaaaaca acaaaagcca ggttatctcc tggctggcgt tgacctggtt gtttggtgcc
4081 ggatttatcg ggatggaaat ctatgaattc catcacctga ttgttaacgg catgggtccg
4141 gatcgcagcg gcttcctgtc agcgttcttt gcgctggtcg gcacgcacgg tctgcacgtc
4201 acttctggtc ttatctggat ggcggtgctg atggtgcaaa tcgcccgtcg cggcctgacc
4261 agcactaacc gtacccgcat catgtgcctg agcctgttct ggcacttcct ggatgtggtt
4321 tggatctgtg tgttcactgt tgtttatctg atgggggcga tgtaatgagt cattctaccg
4381 atcacagcgg cgcgtcccat ggcagcgtaa aaacctacat gacaggcttt atcctgtcga
4441 tcattctgac ggtgattccg ttctggatgg tgatgacagg agctgcctct ccggccgtaa
4501 ttctgggaac aatcctggca atggcagtgg tacaggttct ggtgcatctg gtgtgcttcc
4561 tgcacatgaa taccaaatca gatgaaggct ggaacatgac ggcgtttgtc ttcaccgtgc
4621 taatcatcgc tatcctggtt gtaggctcca tctggattat gtggaacctc aactacaaca
4681 tgatgatgca ctaagagcgg cggttatgat gtttaagcaa tacctgcaag taacgaaacc
4741 aggcatcatc tttggcaacc tgatctcggt gattggggga ttcctgctgg cctcaaaggg
4801 cagcattgat tatcccctgt ttatctacac gctggttggg gtgtcactgg ttgtggcgtc
4861 gggttgtgtg tttaacaact acatcgacag ggatatcgac agaaagatgg aaaggacgaa
4921 gaatcgggtg ctggtgaaag gcctgatctc tcctgctgtc tcgctggtgt acgccacgtt
4981 gctgggtatt gctggcttta tgctgctgtg gtttggcgcg aatccgctgg cctgctggct
5041 gggggtgatg ggctttgtgg tttatgtcgg cgtttatagc ctgtacatga aacgccactc
5101 tgtctacggc acgttgattg gttcgctctc cggcgctgcg ccgccggtga tcggctactg
5161 tgcggtaacc ggtgagttcg atagcggcgc agcgatcctg ctggctatct tcagcctgtg
5221 gcagatgcct cactcctatg ccatcgccat tttccgcttt aaggattacc aggcggcaaa
5281 cattccggta ttgccagtgg taaaaggcat ttcggtggcg aagaatcaca tcacgctgta
5341 tatcatcgcc tttgccgttg ccacgctgat gctctctctt ggcggttacg ctgggtataa
5401 atatctggtg gtcgccgcgg cggttagcgt ctggtggtta ggtatggctc tgcgcggtta
5461 taaagttgct gatgacagaa tctgggcgcg caagctgttc ggcttctcta tcatcgccat
5521 cactgccctc tcggtgatga tgtccgttga ttttatggta ccggactcgc atacgctgct
5581 ggctgctgtg tggtaacaaa acctctctat taaaaaggtg ctacggcacc ttttttctta
5641 gcattagaaa catatccctc tcgaaatatt tactaaaaaa tccgcatgtt taccccattc
5701 gtttgccgct ttacactagt cgcgaattta aaacagaggt ggtaatgaac gattataaaa
5761 tgacgccagg tgagaggcgc gcgacctggg gtttagggac cgtattctcg ttgcgcatg
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