GenBank-Updates@genbank.bio.net (08/27/90)
LOCUS CHKACACB 5462 bp ds-DNA VRT 27-AUG-1990 DEFINITION Chicken cardiac alpha-actin gene, clone lambda-AC7, complete cds. ACCESSION X02212 K02256 KEYWORDS actin; alpha-actin; alpha-cardiac actin. SOURCE Chicken genomic DNA, clone lambda-AC7 [1],[2]. ORGANISM Gallus gallus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Aves; Neornithes; Neognathae; Galliformes; Phasianidae. REFERENCE 1 (bases 841 to 897) AUTHORS Chang,K.S., Zimmer,W.E.Jr., Bergsma,D.J., Dodgson,J.B. and Schwartz,R.J. TITLE Isolation and characterization of six different chicken actin genes JOURNAL Mol. Cell. Biol. 4, 2498-2508 (1984) STANDARD full staff_review REFERENCE 2 (bases 1 to 5462) AUTHORS Chang,K.S., Rothblum,K.N. and Schwartz,R.J. TITLE The complete sequence of the chicken alpha-cardiac actin gene: A highly conserved vertebrate gene JOURNAL Nucleic Acids Res. 13, 1223-1237 (1985) STANDARD full staff_review COMMENT [1] also sequenced part of the 3' terminal fragment. FEATURES from to/span description pept 841 969 cardiac alpha-actin, exon 2 (first expressed exon) 1802 2126 cardiac alpha-actin, exon 3 2752 2913 cardiac alpha-actin, exon 4 3026 3217 cardiac alpha-actin, exon 5 4216 4397 cardiac alpha-actin, exon 6 4757 4900 cardiac alpha-actin, exon 7 pre-msg 299 5075 actin mRNA IVS 339 820 actin mRNA intron A IVS 970 1801 actin cds intron B IVS 2127 2751 actin cds intron C IVS 2914 3025 actin cds intron D IVS 3218 4215 actin cds intron E IVS 4398 4756 actin cds intron F BASE COUNT 1376 a 1280 c 1179 g 1627 t ORIGIN 3 bp upstream of SmaI site. 1 cccgggcccg acatctcgcg gacgcaccgc ttgtacattc cggagggcca tggagggcca 61 cagagactcc gagcctcccc tcccaccacg tcggcgggag gctccctatt tggccatgtg 121 gcggcgggac cgctgctcct cacctgcctt agatggccgg acagccgcgc cggccttggc 181 cattcatggc cgcgctgcgc gcatggcgaa gcggcaaata aggagaaggt ggctgcccgg 241 ccgcggacgc cggccccgcc ggggctataa agcggcagct cgcgccccgc cggcacccag 301 gcgctcctcg gtaacctccc gccgtccgtg ctgctccggt gagtggtgct gtaaggcggg 361 acggaaggga tggagagaga gaagaatgga tggggggcag ccgacgggag gcaccgacgg 421 gctcagcttg tgcggtgtta ccggcgtccg cctgctcctg ccgcgagcac gggacgggac 481 accgccctct gcccttctcg ccctcggagc ggctgcggct cgacggggcg cggtgcgccg 541 gaggcggcgt gcgctggcag agccggactc tgcgatacca tttcgctcat ccattttgat 601 ctgtgcccat agggtaccgc tagtgatgcc caaagttagc gttctgggag ccttctgaat 661 cgtgaacggc agcggcgacg ggtccctcag agccgtgccc gagcatggcc gagccccgcg 721 gacccgccga gccacccgct gccaccgggg ctgcccctgt ccccgggggt gccccgaggt 781 gcccgcagag gtctgtatgc gccgccgcgc tgtcttgcag gtccgtgcct atcagccaag 841 atgtgtgacg acgaggagac caccgcgctg gtgtgcgaca acggctcggg gctggtcaag 901 gcgggctttg ctggggacga tgcccccagg gccgtgttcc catccatcgt cggccgcccc 961 aggcaccagg taaattcctg cccgatgaca gaaccgggct ccattctctc atcaggagtc 1021 agccccactc cttaattctg tccttctcct gccaccccag ccttctcttc ccttgtgtcc 1081 tactgacaca ttttctgttg tctgtgcttc ttccctacat ttccctcttt ggctcaccat 1141 catcttatct ctgtcactgt caccccctgt accagttctt tcccaattca ccagtatccc 1201 ttctctctcc cccaatgagt ccaaacccat tttcctccag aactgcttcc cacaccatcc 1261 cctaagtgag ataagctgct ggtgttggtt caaagacatc tccatgggct gaatttgtcc 1321 cacccatcca tgtcccacat atcaagccct tgcatttcct ctgctgcttt tgtctgtctc 1381 tgccttctta ccaccttcta agccttcttt tctggggtcc ccatttcatt ctccttgtat 1441 tttctctcag tttgttcaaa acacagaaaa cgtagggctt tttcttttat aatttctgtg 1501 gcaaaaactt atcatgcttt tcactgtcaa ttgaacttct ggtccagaaa gaggtaattg 1561 aaaataaagg atatattaaa aaaaaatagt gggaaaagtc ctttgatctg attaaaggaa 1621 aaataacttt gagaacttca agttctgttg agttaatatc ttaataaaca actttaacaa 1681 ccttttagtg gccactactg tttgtacctc tctggaaaat agcatagttg attgaggtat 1741 aaatctagct ctgtggtgat gtctttctca aatcatgcgt tcctgtattt tgttctttta 1801 gggtgttatg gtcggtatgg gtcaaaaaga ttcctatgtg ggtgatgaag cacagagcaa 1861 aagaggtatc cttactttga aatatcctat tgaacatggc atcatcacca actgggacga 1921 tatggaaaag atctggcacc acactttcta caatgaactc cgtgtggccc ctgaggagca 1981 ccccaccttg ctcacagaag cacccttgaa ccctaaagct aatcgtgaaa agatgaccca 2041 gataatgttt gagaccttca atgtacccgc tatgtatgtg gcaatccagg ctgtcctgtc 2101 cctgtatgcc tctggacgta ccacaggtaa aatagacttc tttcctttca ggacccacag 2161 accctccttc cttcccactc caaacacaca gacacacaca cacagaacaa cgtcgatgtt 2221 caaatttaca gaaaactatg ctgttggctt ttttattatt attatattta ttaaaggtaa 2281 ctaactagca gaaaagctag tctgtgaaag gaactatata aatttgtctg cattggttta 2341 aaagaaaggc attaaagaac ctgattttcc tgctgcttgt catgatgcaa acaaggagac 2401 atcactgcag ttagcacaag tattacacca gtttgagttt aaactgagcc taagagttgc 2461 cctttactgt atcaaggcgg ttgctaccat caatacactt gctgctcagt gtagcattgg 2521 taggctattc atatggattc attagaagtc tgtatgggac aattttttat ggggattgtt 2581 tgaccaaatg ggaatattgg aaggagttgg caagacctgc atggcagtag ctggctaaaa 2641 tagaatgacg ctgcttatac tacctgaaaa tgcatgtctg atatctgtgg tactgctgtg 2701 ttgtaaggtt tctcaggtta ttccaactgg tttctgacat ttcttttcca ggtattgttc 2761 ttgactctgg tgatggagtc acccacaacg tgcccattta tgaaggttat gctttgcctc 2821 atgctatcat gcgtctggat ctggctggca gggatctgac cgactacctc atgaagatcc 2881 tcacagagcg tggctattcc tttgtgacca caggtcagtc cttcagcttg accctcttct 2941 gaatatcctc atgtctccct tggcccacct tctttccctg atattttgct tctccaaact 3001 tgatttgatt tctgtgtacc tgcagctgaa cgtgagattg ttcgtgatat caaagagaaa 3061 ttgtgctatg ttgcgctgga ctttgagaat gaaatggcca cagctgcttc gtcatcctcc 3121 ctggagaaga gctatgaatt gcctgatggt caagtgatca caattggtaa tgaacgtttc 3181 cgctgcccgg aaaccttatt ccagccatcc tttattggta agtgcttcaa ggaaattcct 3241 ttttcagtag gaggtgcaaa tgaatcagaa gttctagaag gtgtcccact ccccctcctg 3301 tttatctaca ttttgcacaa aatcaactat aaataaggag tttgattctc tgctccctgt 3361 ttgctgtgct taatgtgatt actagctaat aattagctga tctatggact cctgttgcaa 3421 ctctagggcc agcttttaag ttcacaattt ttatgatgga atgtacactg acaatgtgtc 3481 aatgcacaat gggcaagagc agctttcagt gctgtatttg taccacctgc acttcaaaca 3541 ctatctgatt ccatgaagaa gtaaaatgtg tgggagataa aaagatgtaa tgaagaagtg 3601 tatatttaca tgcactgaaa ttaaatcttg ccgtggacaa gatggctggt tttgctgtgt 3661 gtagatgcag ctgacagaac agcaaatgct tataatctaa gcccaagcaa caaatgcagt 3721 tgttggtcag ctgatgtgtt actgtggatt tagtgtcagt tctttcagga agcacctgtt 3781 aaaattataa attggaatgc aacctacgaa cacttgcttc tggtttcttt ttacttatca 3841 ccaaatgcta acatcctcat ctatgtcttg gtcttgtctt catgtttata aatggcatag 3901 actcacaata aatgagttta tcttatgtgt ctaactcttc tcttactgta ggtcttgtgt 3961 cttttctttg cacatgcatt atgattctta gcttttctaa taaataatat tagttttcta 4021 agcttgtcct atagttctgg gttgtttttt gggttttttt tttttttttt gtatttttct 4081 gtacaactta gtaatcaata agcaatttta gaacaaaaca ataaaagttc atatttatag 4141 tgaggagaaa tgctgagtgt ccttttcaca aagacctcat gtataattta ctgcatcagc 4201 ttcttttttc tcaaggtatg gaatctgctg gtattcatga aactacctac aacagcatca 4261 tgaagtgtga tattgatatt cgtaaggatc tgtatgctaa caacgtcctc tcaggtggta 4321 caacaatgta ccctggtatt gctgatcgca tgcagaaaga aatcactgca cttgctccta 4381 gcacaatgaa gatcaaggtg aggactttga ttctactaaa aaatttgaat aaggtttagg 4441 aaaatgtcat taaattagga tacaggaaca actcataaat gagaccatca gctgatgggc 4501 ggtccggcca agaagaaata ttttcatttc acttcattaa tattataaga tattaattga 4561 agcaatgtgc aaatcaggaa aattgatctg tagatttagt taaagaatat tacattacca 4621 gctgctgaag accagtacat tactatacat tattacttta agaaacacct agcagtttgg 4681 tgtgttgatg atgtgggtta gttgtgcagg aattgaactg ttaacgtagg attttggctg 4741 tttctcttca tcctagatca ttgctccacc tgaacgcaag tactctgtct ggattggtgg 4801 ctccattcta gcatctttgt ccaccttcca gcaaatgtgg atcagcaaac aggagtatga 4861 tgaggctggt ccatccattg tccaccgcaa gtgcttctaa gacttttccc tacatttact 4921 tcccactcag gatgatgaca gtatgcttct tggagtcttc tggcagccct tcctgaactc 4981 ctccgtactt gtacagtttg tttacacact tgtgcaattt atttgtgctt ctaatattta 5041 tgctttataa ataaagatct ggacttgcaa cctacaaatg tttctgattc ttttattcta 5101 agcgttattt ggttaaaaat gagtctgtga atacctggat ttggaaactc ccatcagatt 5161 tgtcatacgt gtctttctaa gtgatgtgga catgttaggt catatttcat atttatagtc 5221 ttaatttgta aacttgaaac aaaagaacta tcatttacaa gaaagtaacc ttgagggtaa 5281 gacccaagga gtggaacaag aaggaaacct ctcacattca ctgaatgggc ttagaattgc 5341 tttttttcca ttgcgttaat tataacctca gtaatttaat atcaacttac tgaaagccaa 5401 agcctctcaa gaaggattat gctaatacac ctagaaagca atttataact aattaactca 5461 gt //