GenBank-Updates@genbank.bio.net (09/07/90)
LOCUS VCHHLYB 2616 bp ds-DNA BCT 07-SEP-1990
DEFINITION V.cholerae hemolysin (hlyA) gene, complete cds.
ACCESSION M36855
KEYWORDS hemolysin.
SOURCE V.cholerae (strains El Tor RV79(Hly+) and RV79(Hly-)) DNA.
ORGANISM Vibrio cholerae
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Vibrionaceae.
REFERENCE 1 (bases 1 to 2616)
AUTHORS Rader,A.E. and Murphy,J.R.
TITLE Nucleotide sequences and comparison of the hemolysin determinants
of Vibrio cholerae El Tor RV79(Hly+) and RV79(Hly-) and classical
569B(Hly-)
JOURNAL Infect. Immun. 56, 1414-1419 (1988)
STANDARD simple staff_entry
FEATURES from to/span description
pept 220 2445 hemolysin (hlyA)
site 952 962 11 bp deletion found in the classical 569B
strain
site 963 965 stop codon for 569B
site 1903 1903 a in 569B
BASE COUNT 737 a 552 c 630 g 697 t
ORIGIN
1 gagggtaacc catgagacac atgcaaaatg ggtatgttct aattacttga aaatataaga
61 atattactca actcagaatt atagaagaga gtttattagc aactattaat ttgagtgttt
121 gatatatttc ttgttttttc agtagtttga gtataagtca ctttgtttgg aaatctctct
181 tgtaataaca ctaaaaataa cagagtcagt gaggtttata tgccaaaact caatcgttgc
241 gcaatcgcga tattcacaat attaagcgca atatccagtc caaccctgtt ggcaaatatc
301 aatgaaccaa gtggtgaagc ggcggatatt attagtcaag tcgctgatag tcatgcaata
361 aaatattaca atgctgctga ttggcaagcc gaagacaacg cattaccgag cttagctgag
421 ctgcgcgatt tggtgattaa ccagcaaaaa cgcgttttgg ttgatttcag tcagatcagt
481 gatgctgaag gtcaagcaga gatgcaagcc caattcagaa aggcttatgg ggtgggtttt
541 gctaatcaat ttattgtcat cagtgaacat aaaggggaac tgctgtttac accttttgat
601 caggcagaag aggttgaccc tcaattactc gaagcgccgc gtaccgctcg cttattagcg
661 cgctctggtt ttgcaagtcc ggcaccggca aacagcgaaa caaatacctt gccgcatgtg
721 gctttttaca tcagtgtcaa ccgtgcgatc agcgatgaag agtgtacctt taacaactct
781 tggttgtgga aaaacgaaaa gggcagtcgt ccgttctgta aagatgccaa tatctcattg
841 atttatcgag ttaacctaga gcgttcattg caatacggca ttgtgggttc cgcgacaccg
901 gatgccaaaa ttgtgcgtat cagcctagat gatgacagca cgggagccgg cattcatctg
961 aatgatcaac tcggttatcg tcagtttgga gccagttata cgacgttaga tgcctatttc
1021 cgtgagtggt caaccgatgc gattgcccaa gattatcgct tcgtgtttaa cgcatcgaac
1081 aataaagcgc agatcctgaa aacctttcct gtcgataaca ttaacgagaa atttgagcgc
1141 aaagaggttt caggttttga gcttggggtg actggtgggg tggaagtcag tggagatggc
1201 ccgaaagcca aactagaggc gagagcaagt tatacccaga gtcgctggtt aacctacaac
1261 acacaagact atcgtattga gcgtaatgcg aagaatgcgc aagcggttag ctttacatgg
1321 aatcgtcaac aatacgcgac agcagaatcg ctactcaatc gttcgaccga tgctttgtgg
1381 gtgaatacct acccggtaga tgtaaaccgt attagcccgc tgagctacgc gagttttgtg
1441 ccgaaaatgg atgtgattta taaagcctca gccacagaga caggcagtac ggattttatc
1501 atcgactctt cggtcaatat ccgcccaatc tataacggtg cttataagca ctactatgtg
1561 gtcggtgctc atcaatccta ccatggcttt gaagataccc cacgtcgtcg aatcacgaaa
1621 tcggcaagct ttacggtcga ttgggatcac ccagtattca cgggtggccg cccggtcaac
1681 ctacaacttg ccagctttaa caaccgctgt attcaagtcg atgctcaagg tcgcttggcg
1741 gccaatacgt gcgatagcca gcaatcagcg caatcgttca tctatgatca gcttggtcga
1801 tatgtgagtg cgagtaacac caagctctgt cttgatggtg aggcattaga cgcattgcaa
1861 ccctgtaacc aaaacctgac tcagcgttgg gagtggcgta aaagcacaga tgaattgacc
1921 aatgtctaca gcggcgagtc ccttggacat gacaaacaaa ccggtgagct tggtttgtat
1981 gcgagcagca acgatgcggt aagtttacgt accatcaccg cttataccga tgtgtttaat
2041 gcgcaagaaa gttcgccgat tctgggttac acacaaggga aaatgaatca gcagcgtgtg
2101 ggacaagatc atcgtttgta tgtgcgagcg ggtgctgcca ttgatgcatt agggtccgcc
2161 tccgatttat tggttggtgg caatggtggt agcttgagtt cggtggatct gtccggcgtg
2221 aaatccatca cggcaacctc tggtgatttc caatatggcg gtcagcagtt ggtggcgctg
2281 acattcacct accaagatgg acgtcagcaa acggtaggct cgaaagcgta tgtcaccaat
2341 gctcatgaag accgtttcga tttaccggct gccgctaaga tcactcaact gaaaatttgg
2401 tctgacgatt ggttggtgaa aggggttcaa tttgatttga actaaaaaga gaccgtcaac
2461 atagccatta aacaatggaa gcatgccctg aaatttcagg gcattttatg tatttaatgt
2521 tctttattta gtcatttatc gacttaacaa ttcagaaaca gaatagattt tgccatacta
2581 cttcaaaggc tgaacttatt taggtgtaca gaattc
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