GenBank-Updates@genbank.bio.net (09/07/90)
LOCUS PEAPHTAP 5690 bp ds-DNA PLN 07-SEP-1990
DEFINITION P.sativum phytochrome gene, complete cds.
ACCESSION M37217
KEYWORDS photoreceptor chromoprotein; phytochrome.
SOURCE P.sativum DNA, (L. cv. Alaska).
ORGANISM Pisum sativum
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
Rosidae; Rosales; Fabaceaea.
REFERENCE 1 (bases 1 to 5690)
AUTHORS Sato,N.
TITLE Nucleotide sequence and expression of the phytochrome gene in Pisum
sativum: Differential regulation by light of multiple transcripts
JOURNAL Plant Mol. Biol. 11, 697-710 (1988)
STANDARD simple staff_entry
FEATURES from to/span description
pept 1190 3245 phytochrome, exon 2 (first expressed exon)
3328 4144 phytochrome, exon 3
4223 4513 phytochrome, exon 4
4650 4860 phytochrome, exon 5
pre-msg 505 4984 phytochrome mRNA and introns (5' end +/- 8 bp)
pre-msg 505 4986 phytochrome mRNA and introns (5' end +/- 8 bp)
pre-msg 505 4988 phytochrome mRNA and introns (5' end +/- 8 bp)
pre-msg 505 4997 phytochrome mRNA and introns (5' end +/- 8 bp)
pre-msg 505 5074 phytochrome mRNA and introns (5' end +/- 8 bp)
pre-msg 505 5118 phytochrome mRNA and introns (5' end +/- 8 bp)
pre-msg 675 4984 phytochrome mRNA and introns
pre-msg 675 4986 phytochrome mRNA and introns
pre-msg 675 4988 phytochrome mRNA and introns
pre-msg 675 4997 phytochrome mRNA and introns
pre-msg 675 5074 phytochrome mRNA and introns
pre-msg 675 5118 phytochrome mRNA and introns
pre-msg 897 4984 phytochrome mRNA and introns
pre-msg 897 4986 phytochrome mRNA and introns
pre-msg 897 4988 phytochrome mRNA and introns
pre-msg 897 4997 phytochrome mRNA and introns
pre-msg 897 5074 phytochrome mRNA and introns
pre-msg 897 5118 phytochrome mRNA and introns
IVS 949 1178 phytochrome, intron A
IVS 3246 3327 phytochrome, intron B
IVS 4145 4222 phytochrome, intron C
IVS 4514 4649 phytochrome, intron D
signal 5046 5051 put. poly-A signal
signal 5091 5095 put. poly-A signal
BASE COUNT 1585 a 1066 c 1217 g 1822 t
ORIGIN
1 atcgatagag aaaaactctc caccaattaa aatcaaacaa tacgatgaca tggcatcact
61 atcattcagc cgcatcacgt aaaaactttc cgcatccctc gcacgtgaca cccataactc
121 actactttcc cattatccaa cgcatgcctc ttggacactc gtccaatcaa gttcctccac
181 ctcacccctt tttttcccca cccctattct atacttagca tgtttaatta ttgaattagg
241 attcaataat tatccattta ttaaattaaa ttaaaattaa tagccgacat ggaaagtgaa
301 gttgaaaaag aaagtcatgt tttctcagta acagtcatgt tttctgttta attatgtgtc
361 tgttttatca ttcatcattt aactgtcctt tttttcttat ctattttagg aacaaaacca
421 aacccacttg cccaaattag ttttatttta ttttatttta aattataata tataataata
481 aataaacagc accaacacca agtagatgct gttgctgaat gaatctatct aagagttgga
541 ttggattgga tgatgatttg attttttatt tttataatat tcttttattt atctttattc
601 atttcattcc tttctttctc ccacaccttc acatgggaac actataaaat tcatatatct
661 ttatagcata tgatggcggt cccttctgtt ctcagtcaca attctgtgtt gaataataat
721 aatactgagc ttccagttgt ggactaaggg ctccatctag gtaggagaca aacaaggccg
781 gtgatccaga ttcaccatct tatttactgt tgttgctgct gcaggtgcac ggtatggtat
841 gctggtctcc cactaatggt tattttaacc cttaccttta atacctttct ttcttcaact
901 tgtacttgaa cttgaacttt cacaacagcc aagtttttcc ctttcaaggt tagttagtac
961 tattttgctt cttgtgttta tatttcatca tgtgtcaggg ttgttgattt gattgttttc
1021 tatgattggg ttttacttca tagattgtga ctagttattt tggtaaagcc tttgataatt
1081 ttgtcgtatt gatgatagag ttcaatagtt ttgtaacatc atcgtatatg gttttgattg
1141 acttggttat cttgtttttt ttactgttgt aaatgtagtt tgtgttaaaa tgtcaaccac
1201 gaggcctagc caatcgtcca acaattcggg gaggtcaaga aatagtgcta ggattattgc
1261 tcagacgact gtggatgcaa agcttcatgc aacttttgag gagtccggta gttcgtttga
1321 ctactcgagt tcggtgcgtg tttctggctc ggtggatgga gatcaacaac cgaggtccaa
1381 caaagtgacg acggcttacc tcaatcatat acagagaggt aagcagatcc agcctttcgg
1441 gtgcttgcta gctttagatg agaaaacgtg caaggttgtt gcgtatagtg agaatgcgcc
1501 tgagatgctg actatggtga gtcatgctgt tcctagcgtt ggtgaccatc ctgctcttgg
1561 cattggaact gacataagga ctgttttcac tgcgccgagt gcttctgcct tgcagaaggc
1621 gctagggttt gcggaggttt cgcttcttaa cccgattctt gttcattgca agacttctgg
1681 gaagccgttt tacgcgatca ttcatcgtgt tactggtagt ttgatcattg actttgagcc
1741 ggtgaagcct tatgaagttc ccatgactgc tgcgggtgcc ttgcaatctt acaaacttgc
1801 tgctaaagca attacaagat tgcaatcttt ggctagtggc agcatggaaa ggctttgtga
1861 taccatggtt caagaagttt ttgaactaac gggttatgac agggtgatgg cttataaatt
1921 tcacgaggat gatcacgggg aggtgattgc tgagatagca aagccaggcc tagagccata
1981 tctaggtctg cactatccgg cgacagatat tccccaggct gcgcggtttc tatttatgaa
2041 gaacaaggtc cgtatgatag ttgattgtaa tgcaaaacat gtgaaggttc ttcaagacga
2101 aaaactccca tttgatttga ctctgtgcgg ttcgaccttg agagctccac atagttgcca
2161 tttgcagtac atggctaaca tggattcaat tgcttcgttg gttatggcag ttgtcgtcaa
2221 tgacagcgat gaagatggag atagcgctga cgcagttctc ccacaaaaga aaaagagact
2281 ttggggtttg gtagtttgtc ataacactac tccaaggttt gttccttttc ctctaaggta
2341 tgcttgtgag tttctggctc aagtgtttgc catccatgtg aacaaagaaa tagagttaga
2401 atatcagatt cttgagaaga atatcctgcg cacgcagacg ctgttgtgtg atatgttgat
2461 gcgagatgca cccttaggta ttgtatcaca aagccctaat ataatggatc tagtgaaatg
2521 tgatggggct gcactctttt atagaaacaa gttatggtta ttaggagcga caccgactga
2581 atctcaatta agagagatag ctttatggat gtctgagtat catacagatt caacaggttt
2641 gagtacagac agcttgtcgg atgcagggtt tccaggggct ctttctctta gtgatactgt
2701 atgtggaatg gcagctgtta gaataacttc aaaagacata gttttctggt ttaggtcgca
2761 cactgctgca gaaatccgat ggggtggtgc aaagcatgaa ccgggcgacc aagacgatgg
2821 taggaagatg catccaagat catcattcaa ggctttcctt gaagttgtga aagccagaag
2881 cgtgccgtgg aaagactttg aaatggatgc tattcattcg ttgcagttaa tactgagaaa
2941 tgcgtccaaa gatacagata ttatagattt gaatacgaag gcaatcaata caagactaaa
3001 tgatttgaag attgaaggaa tgcaggaatt ggaagcagtg acaagtgaga tggttagatt
3061 aattgaaaca gcaacagtgc ctattttggc agtggatgtt gatgggacgg tcaacggatg
3121 gaatataaaa atcgccgagt tgacaggtct tccggttggc gaagctattg gaaaacatct
3181 actcaccctg gttgaggatt cttcaactga tatagtcaag aagatgctca acttggcact
3241 gcagggtatg ccttttttcc ttttccatct tattatcctt tacttaagac tctaactgtt
3301 gattttgttc tcttataatg taatcaggtg aagaagagaa gaatgttcaa ttcgagataa
3361 aaacacatgg ggatcaggtg gaatccggtc ctattagttt gatagttaac gcatgtgcaa
3421 gcaaggatct tcgtgaaaat gtagtggggg tttgttttgt ggcccaagat ataactgctc
3481 agaagactgt catggacaaa ttcacccgaa tcgaaggcga ttacaaagca attgtgcaga
3541 acccaaatca gttgatccct cctatattcg gtacagatga atttggctgg tgttgtgagt
3601 ggaatgcagc tatgattaag ttaaccggat ggaagcgcga ggaggtgatg gataaaatgc
3661 ttctcggaga ggttttcgga actcaaatgt cttgttgtcg tctaaagaat caagaagctt
3721 ttgttaattt cggcattgta cttaataaag ccatgaccgg tttggaaaca gaaaaggtcc
3781 cttttggctt cttctctcga aaaggcaagt atgtagagtg cctactctcg gtgagtaaga
3841 aaatcgacgc agagggccta gttaccggag tcttctgttt cttgcagtta gctagccctg
3901 agctgcaaca agcattacat attcagcgcc tgtccgaaca aaccgctctc aagagactga
3961 aagtactaac ttacatgaaa aggcagatca ggaatccgtt ggctgggatc gtgttttcca
4021 gtaaaatgct ggagggtact gacttggaaa ccgaacaaaa gcgaatcgtg aacactagtt
4081 ctcagtgcca acgccagctt agcaaaattc ttgacgactc tgatctcgac ggcatcattg
4141 atgggtatga tatcagtaaa tatattgttc ttttaacatt tttttttacc cttactcaca
4201 ttcatgtgtg aaattttgac aggtacttgg atcttgagat ggctgaattc actttacatg
4261 aggtactggt tacctctctt agtcaagtca tgaataggag taacacaaag ggtatccgta
4321 tagccaacga tgttgcggag catatcgcga gggaaacctt gtatggtgat agtcttaggc
4381 ttcagcaggt cctagctgac tttttactaa tttccatcaa ttccacacct aatggaggcc
4441 aggttgttat agcagcctcc ttaactaaag aacagttggg aaaatctgtc catcttgtta
4501 acttggagct caggtaactg ttccatattc acgcatgtat cgattttcag tatccgatga
4561 tttaagcctc ggtaataatc ttagctttgg tgaaactgct aactgcaata aactaatatc
4621 tgtatatatt ttgtttgcga tttgtgtagc ataacacacg gtggtagtgg cgtgccagaa
4681 gcggcgctga accagatgtt tggaaataat gtgctagaat ctgaggaggg tattagccta
4741 cacatcagtc ggaagttgtt aaagcttatg aatggagatg ttcgttattt aaaagaagca
4801 ggaaaatcat cgtttattct atctgttgaa cttgcagcag ctcataagtt gaaaggttga
4861 aattttggaa aaataataaa agtgaacacg gcatgctatt gttcaatgta actcttattt
4921 tgtttcatgt ttctttaact tgttgtaacg tatgttgtag atatgtgtat tagtgtctct
4981 ttcacactcg tggcctattc ttatttctta gtcatgcttt atgttttttg ttttattttt
5041 agagcaatta atggcatgtg tggggatgaa cgcagttggg gaaaacagtt aataacaact
5101 atgctatgac ttactgtact agtttctcaa tatcttcttt ctctgcttta ttcagtcctg
5161 tcacccatac tatatatagt acacatatat agtacaatct aggaagagtt taaagagtac
5221 attccaccca attacaagtt ctgaataaca aactagtgac tcttttaaca atcttgatta
5281 ctcacagcac tgacaaataa aagcttccta ccccagattt gagctacttg tacctcattg
5341 catttctctt tgcctcgcaa ttgtggaatg gactcctcct cttctgaccc tatcctttcc
5401 aaatcttcct cttcatagtt catgacatcc cgagtccatc aaaactgacc ttgtccttaa
5461 ggtcaaaggt cgggtaaata gcatatatgt ctctcaaaac ttggttttga tcattaatag
5521 tgtctttctt ccaatccatc acagctaacg gcttgatgtg aggccggtat ccaagaggca
5581 tatccaaggt tttcatagtt gtatcaaaat agggtttcaa gtttcaactg tgatatatgg
5641 aacataagac gaatcctatg ggtgcatggg aatttcgata gaaatgctac
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