GenBank-Updates@genbank.bio.net (09/07/90)
LOCUS STYRPOBG 4185 bp ds-DNA BCT 07-SEP-1990 DEFINITION Salmonella typhimurium rpoB gene for beta-subunit of RNA-polymerase. ACCESSION X04860 X04642 M37431 KEYWORDS RNA polymerase; RNA polymerase beta subunit; rpoB gene; unidentified reading frame. SOURCE Salmonella typhimurium. ORGANISM Salmonella typhimurium Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 4185; enum. 62 to 4246) AUTHORS Sverdlov,E.D., Lisitsyn,N.A., Gur'ev,S.O. and Monastyrskaya,G.S. TITLE Primary structure of the rpoB gene, coding for beta-subunit of RNA-polymerase from Salmonella typhimurium JOURNAL Dokl. Biochem. 287, 232-236 (1986) STANDARD simple automatic REFERENCE 2 (bases 1 to 4185) AUTHORS Lisitsyn,N.A., Monastyrskaya,G.S. and Sverdlov,E.D. TITLE genes coding for rna polymerase beta-subunit in bacteria structure/ function analysis JOURNAL Eur. J. Biochem. 177, 363-369 (1988) STANDARD simple staff_entry FEATURES from to/span description pept 21 4049 beta subunit of RNA polymerase (AA 1 - 1342) pept 4126 > 4185 open reading frame (20 AA) BASE COUNT 1025 a 1102 c 1156 g 902 t ORIGIN 1 tcagcgagct gaggaaccct atggtttact cctataccga gaaaaaacgt attcgtaagg 61 attttggtaa acgtccacaa gttctggatg taccttatct cctttctatc cagcttgact 121 cgtttcagaa gtttatcgag caagatcctg aagggcagta cggcctggaa gcagccttcc 181 gttccgtgtt cccgattcag agctacagcg gtaattccga gctgcagtac gtcagctacc 241 gccttggcga accggtgttt gacgttcagg aatgtcagat ccgtggcgtg acctattccg 301 caccgctgcg cgtaaaactg cgtctggtga tctacgagcg cgaagcgccg gaaggcaccg 361 taaaagacat taaagaacaa gaagtctaca tgggcgaaat tccgctcatg accgacaacg 421 gtacctttgt tatcaacggt actgagcgtg ttatcgtttc tcagctgcac cgtagccctg 481 gcgtcttctt tgactccgac aaaggtaaaa cccactcttc gggtaaagtg ctgtataacg 541 cgcgcatcat tccttaccgt ggttcctggc tggacttcga attcgatccg aaggacaacc 601 tgttcgtacg tatcgaccgt cgccgtaaac tacctgcgac catcatcctg cgtgcgctga 661 actacaccac tgagcagatc cttgacctgt tctttgagaa agtcgtcttc gaaattcgcg 721 acaacaaact gcagatggag ctgattccag aacgtctgcg tggcgaaacc gcgtcgttcg 781 atatcgaagc taacggcaaa gtgtacgttg aaaaaggccg tcgcattacc gcgcgtcaca 841 tccgtcagct ggaaaaagac gatatcaagc atatcgaagt tccggttgag tacatcgcag 901 gtaaagtcgt ctctaaagac tacgttgacg aatctactgg cgagctgatc tgcgcggcga 961 acatggagct gagcctggat ctgctggcta agctgagcca gtccggccac aagcgtatcg 1021 aaacgctgtt taccaacgat ctggaccacg gcccgtacat ttctgaaacg gtacgcgtcg 1081 acccaactaa cgatcgtctg agcgcgctgg tagaaatcta ccgcatgatg cgccctggtg 1141 agccgccgac acgcgaagcg gctgaaagcc tgtttgagaa cctgttcttc tccgaagacc 1201 gctatgacct gtctgcggtg ggtcgtatga agttcaaccg ttctctgctg cgcgacgaaa 1261 tcgaaggttc cggtatcctg agcaaagacg acatcattga tgtcatgaag aagctcatcg 1321 atatccgtaa cggtaaaggc gaagtggatg atatcgacca cctcggcaac cgtcgtatcc 1381 gttccgtcgg cgaaatggcg gaaaaccagt tccgcgttgg cctggtgcgt gtagagcgtg 1441 cggtgaaaga gcgtctgtct ctgggcgatc tggataccct gatgcctcag gatatgatca 1501 acgccaagcc gatttccgcc gcagtgaaag agttctttgg ttccagccag ctgtctcagt 1561 ttatggacca gaacaacccg ctgtctgaga ttacgcacaa acgtcgtatc tccgcactcg 1621 gcccaggcgg tctgacccgc gaactggcag gcttcgaagt tcgagacgta cacccgacgc 1681 actacggtcg cgtatgtcct atcgaaacgc cggaaggtcc gaacatcggt ctgatcaact 1741 ccctgtccgt gtacgcacag actaacgaat atggcttcct tgagacgccg taccgtcgtg 1801 tggttgatgg cgtggttact gacgaaattc attacctgtc tgctatcgaa gaaggcaact 1861 acgttatcgc tcaggcgaac tccaacctgg atgacgaagg ccactttgta gaagatttgg 1921 tgacctgccg tagcaaaggc gaatccagct tgttcagccg cgaccaggtt gactacatgg 1981 acgtttccac ccagcaggtg gtctccgtcg gtgcgtccct gatcccgttc ctggaacacg 2041 atgacgccaa ccgtgcattg atgggtgcga acatgcaacg tcaggcggtt ccgactctgc 2101 gcgctgacaa gccgctggtg ggtaccggta tggaacgtgc tgtcgccgtc gactccggtg 2161 ttactgcagt agctaaacgt ggcggtactg ttcagtacgt ggatgcgtcc cgtatcgtta 2221 tcaaagttaa cgaagacgag atgtacccgg gcgaagcggg tatcgacatc tataacctga 2281 ccaaatacac ccgctctaac cagaacacct gtatcaacca gatgccatgt gtgtctctgg 2341 gcgagccggt tgaacgcggc gacgtgctgg cagacggtcc gtccaccgac ctcggtgaac 2401 tggcgctcgg tcagaacatg cgcgtggcgt tcatgccgtg gaacggctac aacttcgaag 2461 actccattct cgtttccgag cgtgttgtcc aggaagaccg tttcaccacc atccacattc 2521 aggaactggc gtgcgtgtcc cgtgacacca agctggggcc ggaagagatc accgctgata 2581 tcccgaacgt gggtgaagct gcgctctcca aactggatga atccggtatc gtttacatcg 2641 gcgcggaagt gacaggcggt gacattctgg tcggtaaggt gacgccgaaa ggtgaaaccc 2701 agctgacgcc ggaagagaaa ctgctgcgtg cgatcttcgg tgagaaagcg tctgacgtta 2761 aagactcttc tctgcgcgta cctaacggtg tctccggtac ggttatcgac gttcaggtct 2821 ttactcgcga tggcgtagaa aaagacaaac gtgctctgga aatcgaagag atgcagctca 2881 agcaggcgaa aaaagacctg tctgaagaac tgcagatcct cgaagcgggc ctgtttagcc 2941 gtatccgtgc ggtgctggtt tccagcggcg ttgaagctga gaagctcgac aaactgccgc 3001 gcgaccgctg gctggaactc ggtctgaccg acgaagagaa acaaaatcag ctggaacaac 3061 tggctgagca gtatgacgaa ctgaaacacg agttcgagaa aaaacttgaa gcgaagcgcc 3121 gtaaaatcac ccagggcgac gatctggcgc cgggcgtgct gaagatcgtg aaggtctatc 3181 tggccgttaa acgccgtatc cagccgggtg ataagatggc aggtcgtcac ggtaacaagg 3241 gtgttatctc taagatcaac ccgatcgaag acatgcctta cgatgaaaac ggcacgccgg 3301 tagacatcgt actgaacccg ctgggcgtac cgtctcgtat gaacatcggc cagattctgg 3361 aaacccacct gggtatggct gcgaaaggta ttggcgacaa gattaacgcc atgctgaaac 3421 agcagcagga agtcgcgaaa ctgcgcgaat tcatccagcg tgcctacgat ctgggcgccg 3481 acgttcgtca gaaagtcgac ctgagcacct tcagcgatga tgaagtgctg cgtctggcag 3541 aaaacctgcg caaaggtatg ccgattgcca caccagtgtt tgacggtgcg aaagaagcgg 3601 aaatcaaaga gctgctgaaa ctgggcgacc tgccgacctc cggtcagatc accctgttcg 3661 atggccgtac gggtgaacag ttcgaacgtc cggtaaccgt cggttacatg tacatgctga 3721 aactgaacca cctggttgat gacaagatgc atgcgcgttc taccggttct tacagcctgg 3781 ttactcagca gccgctgggt ggtaaggcgc agttcggtgg tcagcgcttc ggggagatgg 3841 aagtgtgggc gctggaagct tacggcgccg cctacaccct gcaggaaatg ctcaccgtta 3901 agtctgatga cgtgaatggt cgtaccaaga tgtataagaa catcgtggac ggcaaccatc 3961 agatggaacc gggtatgccg gaatccttca acgttctgtt gaaagagatc cgctcgctgg 4021 gcatcaacat cgaactggaa gacgagtaat tctcgctcaa acaggtcact ggtgtcgggg 4081 taaaacccga caccagattg tgctaactcc gacgggagca aatccgtgaa agatttatta 4141 aagtttctga aagcgcagac taaaaccgaa gagtttgatg cgatc //