GenBank-Updates@genbank.bio.net (09/08/90)
LOCUS NPA39KPA 3223 bp ds-DNA VRL 08-SEP-1990
DEFINITION Autographa californica nuclear polyhedrosis virus 39K protein,
V-ubi, ORF's 1,2,5 and 7 genes, complete cds, and ORF 7, 3' end.
ACCESSION M37122 M12697
KEYWORDS 39K protein; nuclear-matrix associated protein.
SOURCE A.californica nuclear polyhedrosis virus E2 DNA.
ORGANISM Autographa californica nuclear polyhedrosis virus
Viridae; ds-DNA enveloped viruses; Baculoviridae; Baculovirus;
Nuclear polyhedrosis viruses.
REFERENCE 1 (bases 699 to 1041)
AUTHORS Guarino,L.A. and Summers,M.D.
TITLE Functional mapping of a trans-activating gene required for
expression of a baculovirus delayed-early gene
JOURNAL J. Virol. 57, 563-571 (1986)
STANDARD simple staff_review
REFERENCE 2 (bases 1 to 3223)
AUTHORS Guarino,L.A. and Smith,M.W.
TITLE Nucleotide sequence and characterization of the 39K gene region of
Autographa californica nuclear polyhedrosis virus
JOURNAL Virology (1990) In press
STANDARD full staff_entry
COMMENT Draft entry and computer-readable sequence for [2] kindly submitted
by L.A.Guarino, 25-JUL-1990.
FEATURES from to/span description
pept < 1 416 ORF 7
pept 736 374 (c) ORF 6
pept 600 938 ORF 5
pept 932 1759 39K protein (ORF 4)
pept 2040 1807 (c) V-ubi (ORF 3)
pept 2061 2708 ORF 2
pept 2721 3161 ORF 1
signal 764 768 late transcription start for 39K protein
signal 789 792 early transcription start for 39K protein
conflict 815 816 at in [2]; act in [1]
conflict 833 834 gt in [2]; gct in [1]
conflict 872 874 aa in [2]; a in [1]
signal 1758 1764 Poly-A signal
signal 1797 1792 (c) Poly-A signal
signal 2236 2232 (c) late transcription start for V-ubi (major)
signal 2705 2709 late transcription start for ORF 1
signal 2059 2054 (c) late transcription start for V-ubi (minor)
BASE COUNT 964 a 712 c 723 g 824 t
ORIGIN
1 ctgcaggatt gtttatgata atcgagccgg acaaggctgt cctgctgtgt gcccgtcgcg
61 cgtaccggag cgcgaacgcc gccgccgaca tgaacgacac ttttttagaa aaaatttcca
121 taccacgagg tcatcgcgat tgttgcgacg caaaagttta cgagacagcc gtgcgcgagt
181 ttgtggaaga aactggccgg ttttttgaca gcgcgttcat ctacaagttg ccatttacgt
241 tacaatggaa agatgacggc gtcacctaca agtatttgat atacgtaggc gtcgtgcgcg
301 gcaacttgat taacgtgaac gccaaaccca acacgtacac cgtgaagttg ttgccgggca
361 cgtttggcaa tgactaccgt ataatgttaa aacgcgacgc ttcaattgcg aaatagcgcg
421 cagcctggcc atcgtgccgc tcaacaaata ctttaattat atgaacgaca aacaactgat
481 cacgtacgat tacagcaatt acattgaatt ttttgatttt gtgcgcagcg tcaaggcgcg
541 ttttgataat aggcaattgc aggacttttt ctacgccact ctgaaaaaga tagacaacga
601 tgccccccaa aaattgcacg cacttaggcg ggtgtgattc ggactgcttg actcgcagcg
661 aaatacaagc gctgttcagg gaagccatca acacgctcaa gcacacgatg aacacagaaa
721 acgtctgcgc gcacatgttg gacatcgtgt cgtttgagcg tataaaagaa tatataagag
781 ctaatttagg ccatttcaca gtaatcaccg acaaatgttc gaagcgtaag gtgtgtcttc
841 atcacaaacg aattgccagg ttgttgggca ttaaaaaaat atatcatcaa gaatacaaac
901 gggttgtttc aaaggtttac aagaagcaaa catggtaaac gtgccggagc aacaatctcc
961 ggagactgcg gccgtgtgca aaaatgaaaa gctgttgaat aaactggaat cgagctctta
1021 caacaaatcc aacatggacc agctggccgt tattgtaaat ttcttggaaa gaaagaacat
1081 taactatatc cttaacgtgg tgcctgtcat gcaagacgaa cgcaaaatgt ccaaacgcaa
1141 gaagaaagtg attaacaaca ataaatacat tttgtttaac agttggtaca ctaagatcaa
1201 gcagcccgag tggcctagta gcccggccat gtgggatttg gtgaaaaaca agcccgaatt
1261 ggcagatttt gtgttcattt ttgatcacac tgaaaagctg ggcaaaaaaa tggccgaccg
1321 atcgacatcg tcgtcttcaa gcgagaacgc agcaattcca gcgagcaaaa aaagacagac
1381 tgtggtgctt accaacgcaa atttggcaga attgaaggag agctgcgaaa tgcgcgataa
1441 gctttattcg gagttttaca gcttgttaaa cgagacattt aatcacaatg ttgcgcctct
1501 gctaagtaac atttacgacg aagtgttaac gcgcgatttc atcactaaaa gtatggccaa
1561 atttaagacg gtagcgctca agttgcccgt tgcaccgtct actacagagt acgtgcccac
1621 tcccattagc ggcagcagga aaaggaaaag ctcagttcca gccaaacaac gatcttctat
1681 aaagactcgc cgcaacactg tggctccagc acttttaatg gttagcgata atacacaaga
1741 tacaaatatg tcagattaaa taaaaaactt ttatgtatat ttaatcggtt tttattattg
1801 ttattattaa taccctcctc gtaatcgtaa caccatgtga agagtagatt ccttctgaat
1861 attgtaatcg gccatagttt tggaatcttc cagttgtttg cccgcaaaga taagtctttg
1921 ttgatctacg ggcacacctt ctttatcggc aattttttgc ttaagatcgg ccaccgtctc
1981 tgcgggttcc gtttcggcgg taatggtttt gcccgtcaat gttttgatga atatttgcat
2041 ttttacacta ttacttataa atgacaacgg ttgctgtgaa tgcgcccttg cctccaccgc
2101 tggtggaatt gtgcaacagg cggccgatac ccacaccacg aattatttcc cttcaacggc
2161 aattgatttc cacgcccgtg gtcaaaaatt atcaggccga cgtgcaagaa gcgatagatg
2221 ctttcaaacg acttaatata acaccgggcc acttgggcga ggtgatcgat acgatgggcc
2281 aacaaggcaa gctgttgccc gagattatag aggctgacga cgattttaag gtgaatcaaa
2341 cgcgcaatct cagctgcaaa actgtcgagt acttgaattt tttggaaaac gataaattgt
2401 ttcgctgtcg actttgttac acgcacgccg actggttgtg gtgtgatttt caccgaaatc
2461 acgcgtatcg cggcacacgc gacataacat gcaacaacta cgtcgagcac ttaaacagtg
2521 atatgggtgt agtcatgctt atcgaggaat atttttactg tctgtcgtcg tgtaatttta
2581 aacaagatgc caaacgtgcg ctacaaacgc ttacaaaatt tgaatcgcta tccgatctaa
2641 tggcaagcta caatttttca acgcccgacc tggacacaaa cgcgtacgaa ttgatggact
2701 ttgagtaaga tgcattcacc atgtggacgt tacagcagcc cgatttgtat gcgtacgcgg
2761 ttcatgacgg cgctaaaaga accaaaattg cggcttttga tttggacggc acgctaatta
2821 gctcaaagac acggtccaaa tttccaaaaa acccagacga ctggcagctc cttccgtgcg
2881 cacacaagct aaagcgtttg tacgaattag gctacgattt agttgttttt acgaaccaag
2941 cccatttagg ttccggcaaa atcaaagcga gcgatttatt atataaatta gagaatatta
3001 aaaaagctac tggcgtgccc atatcgtttt atgtgtcgcc caacaaggat gagcatcgaa
3061 agccgacacg ggaatgtggc gcgagatggc caaacagttt acgcatattg acaaggaaca
3121 atctttttat gtgggcgacg cggctggccg aattaatcta accaccggtc agaaagattt
3181 tagcgattca gaccgagtgt ttgcaaaaaa cttaagtctg cag
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