GenBank-Updates@genbank.bio.net (09/12/90)
LOCUS THARGG 4154 bp ds-DNA BCT 12-SEP-1990
DEFINITION T.acidophilum 23S ribosomal RNA gene.
ACCESSION M32298 M20822
KEYWORDS 23S ribosomal RNA.
SOURCE T.acidophilum (strain 122-1B2) DNA, clones pTH1-1, pL8 and pTH3-7.
ORGANISM Thermoplasma acidophilum
Prokaryota; Bacteria; Mendosicutes; Archaeobacteria;
Thermoplasmales.
REFERENCE 1 (bases 1 to 4154)
AUTHORS Ree,H.K. and Zimmermann,R.A.
TITLE Organization and expression of the 16S, 23S and 5S ribosomal RNA
genes from the archaebacterium Thermoplasma acidophilum
JOURNAL Nucleic Acids Res. 18, 4471-4478 (1990)
STANDARD full staff_review
COMMENT Draft entry and computer-readable sequence for [1] kindly submitted
by H.K.Ree 23-FEB-1990.
FEATURES from to/span description
rRNA 521 3426 23S RNA
RNA 429 3473 23S RNA gene (3' end +/- 5 bp)
BASE COUNT 1097 a 903 c 1177 g 977 t
ORIGIN
1 tggtgttaag gtggatgcac tatatctatg agagctaccg tgagatggcc ataagggaga
61 tacgcgatat gatagagtag ctgcataagg caattcggaa taacagacgc ggcggttgtt
121 catcgcatag gtagagtaaa tctcacagag gactccgttg ttatagcggt atctgcgcct
181 catagaggac aggcgtttga cgcatgcaga tacataatcg accagataaa ggagagagcg
241 cccatatgga aacgtgacat cgtgcaggga tctcctgcga gctggcactg aacccatttt
301 ttacggtatc agcaagaaaa agttaattaa aatatatttc aaattctgaa aagtgagtat
361 tataaaatta ttggataatt gggcttccgg atcaaaatgc ttatatccct cttaatgata
421 tagtccatac acgcttacaa tgcacctttt aatgcatcac attaaaaggg aagatgtcga
481 attttgatga gactagatga gagatggcac aatggattgt gctctgctaa tctgcctaga
541 ggatggcttg gttcgggcgc cgaagaagga cgtgccaagc tgcgataagc cttggggagg
601 cgcatggagc cttagatcca aggatctccg aatgggactt cctgccgtaa ggcactccga
661 aaggagaggg aacccgggga attgaaacat cttagtaccc ggaggaaaag aaatcaattg
721 agataccgtt agtaaaggcg atcgaaagcg gtagaaggca aaccgaatag cccttcgaaa
781 gaagggaaag atgtggagtt tggtcttcct ctaatgcctc ctgaagcgag atgaatcttc
841 tggaaagaag agccttagaa ggtgatagcc ctgtaatcga agcttcagaa gctacaaggg
901 gaagtaacca gagtaccatg cgtcgttttt cgcgtgggaa tttgggtggc actaacatcc
961 aaccttaaat acgtcccgag tccgatagcg aacaaagtac cgtgagggaa agctgaaaag
1021 aaacccggaa gggtggtgaa aagagcctga aactaggcag agataaactt atagggcagt
1081 taagaggtga agtcgttaac tacgatggat cgctgtccta ttgtccgtgt tgaagaacgg
1141 gccagggagt tctgacgagt ggcaaggtta atcctgaaag gagtagccgt agcgaaagca
1201 actacccgca cagcaatggg ggggtggcgt ggtaaacgcg tttagtcact cgtgagagac
1261 ccgaagccgg tcgatctaca cctgagtagg ttgaagctca gtgaaagctg ggtggaggac
1321 cgaacctatt ctgatgtgca aatcgtttgg atgacttggg tgtaggggtt aaaggccaat
1381 ctaggccggc aatagcgggt tccccccgat actacccgca ggtagacctc gatggagatt
1441 ctcggcgagg tagagcgacc gattggttgg taagcagtcg aaaggctgcg ccgacttgtc
1501 aaactccgaa cttgtcgaga tcgtagaagt cgggtgctag ggggcaggga taagctttgc
1561 ttccgtgatg ggaacaacca agacgagggt taaggtccct aagttctagt taagtgcact
1621 aaataggttt gtggccaaag acagtgggga ggtaggctca gaagcagcca tccttcaaag
1681 agtgcgtaac agctcactca ccgaggtcac atgcctagaa gatggaaggg gctaaaacta
1741 gacaccgaga ccttcgagca ccgaaaggtg atctggtagg ggggcgtgcc atgtggatag
1801 aagtctcccc gagaggaggg atggaccgca tggtatcgcg gatcctggtg aaagtagcag
1861 agaagaaccg tgagaatcgg ttccgccgaa agggctaggg ttccttggca atgttcgtca
1921 gccgagggtt agtcgatcct aaggccatac ctaacaggat atggtcgaag gggaagccgg
1981 ttaatattcc ggcacactga acgttttgcc ctgtatgaga aggttcaggg taggggcggt
2041 acgggtgcca acgtatttat gctcataagc ggatggagag tcgtaatgac gagaagttcg
2101 cgaaagagcg tatgttcccg tttgggaatc gcctcgatcc ccggatccca tgaaaatcat
2161 gcaggggtca ggttcagtat cgtaccaaga accgacactg gtgcccctag gtgagaagcc
2221 taaggcgttt tgggataatg gacgcgaggg aaatcggcaa aatagctccg tatcttcggt
2281 ataaggagtg cctattccgt gagggaatag gtcgcagtga cgaagggact ccgactgttt
2341 accacaaaca cagatcgctg ctagtccgta aggatgtgta tagcggttga aacctgccca
2401 gtgctggtac ctgaaagccc cgtacaaggg gaagaagggc cagtaaacgg cgggggtaac
2461 tatgaccctc ttaaggtagc gtaataccta gccgcttaat tggcggcttg catgaaggtt
2521 caacgtgggt cccactgtcc ccgcgttcag cccagtgaaa ttgatgtact ggtgcacaat
2581 ccagtctctc ccacgtgaaa gcgaagtccc cgtggagctt tactgcagcc tgtagctgtg
2641 gtgcgatcct gactgcgtag tgtaggaagg agccgtcgaa gctctggttt cggccggagt
2701 ggaggcgcca atgaaacact tccctctcgg gattgcgtca ctaacctctt cggagggaca
2761 actattggtg ggcagtttgg gtggggcgcc acgcccctaa caacgtaaca ggggccccca
2821 aaggtcagct caggagggtc agaaatcctc cgtagagtgt aaaagcaaaa gctggcttga
2881 ctgtgttgca gacaactagc aacgcagatg cgaaagcagg gtttagcgaa ccacccagtt
2941 cctccttagt gggggcgggt gataagagag aagttacccc agggataact gagtcgtcct
3001 cggcaagagt acacatcgac ccgagggttt gctacttcga tgtcgtctgt tcctatcctg
3061 gtgctgcata aggtgccaag ggtggggctg ttcgcccatt aaaagggatc ctgagatggg
3121 ttcactacgt cgcgagacag tagggttgct tctccgtggg agtgctcgat gtctgagggg
3181 aaggggcctt tagtacgaga ggaacaaggg ctcgtgacct ctagtttacc ggttgtctgg
3241 caaggcatcg ccgggtagcc acgtcatacg cggataagag ctgaaagcat ctaagctcga
3301 agccgccccc gaaaatagac atcgtcatca gatcgcctct agaagagagg tttgatagag
3361 ccgggatgta aggatcgagc ttcggcgaga ttttaagtcc acggctacta aagatcgaag
3421 gcacaatcca tgctaaattc tcgtctagtt gaagtcataa gcgtgtttga tttttgtttt
3481 ttattttttt gccgttgtag tgtgaactat gatgaaaaat tatattgata taaaagagaa
3541 atagaaaaaa tgatcactgc tttatatttt ctatctgagc ctctttcagt atctgatcgg
3601 ttatgctgtc gaaaatctca cgtatcttat catttataac gacggcaggt attccgttgt
3661 caccgttttc tgctatttct ggtattagag gtatttttcc caggaacggg aggttgtatt
3721 cctttgcgga tttctccccg ccgccgttct tgaatatgta tgtgagctta ccgcagtgcg
3781 cacacaaaac cgctcatgtt ctctattatg ccaaggacag ggagcttcag ctgttttgca
3841 aagtttattg ccttctttgc atcgagaagg gcgacatcct gcggcgttac gactatgaca
3901 acgccatttg attctggtat cagctgggcc acgctcagtg caacgtctcc ggtgccaggc
3961 ggcatgtcaa gcacaacaac atccgtatcc ttccagttta cgtcttccag aaactgctgt
4021 attgccttgt gcatcagcga accacgccat attatcggcg tatcctctgt cggtatgagg
4081 aaacccatgg acaccacgcg aacaccgtat cttgtctctg ccggtattat tccctcctcg
4141 tcagcgtaaa gctt
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