GenBank-Updates@genbank.bio.net (09/14/90)
LOCUS COBSPIKB 1299 bp ss-RNA VRL 14-SEP-1990 DEFINITION Bovine coronavirus 4.9, 4.8, 12.7 and 9.5 kD nonstructural, and integral membrane protein, (5' end), and spike protein (3' end) mRNAs. ACCESSION M31054 KEYWORDS integral membrane protein; spike protein: nonstructural protein. SOURCE Bovine coronavirus (strain Mebus), cDNA to viral RNA. ORGANISM Bovine coronavirus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Coronaviridae. REFERENCE 1 (bases 1 to 1299) AUTHORS Abraham,S., Kienzle,T.E., Lapps,W.E. and Brian,D.A. TITLE Sequence and expression analysis of potential nonstructural proteins of 4.9, 4.8, 12.7 and 9.5 kDa encoded between the spike and membrane protein genes of the bovine coronavirus JOURNAL Virology 177, 488-495 (1990) STANDARD full staff_entry COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by D.A.Brian, 02-JAN-1990. FEATURES from to/span description pept < 1 334 spike protein pept 324 455 nonstructural 4.9 kDa protein (put.) pept 491 628 nonstructural 4.8 kDa protein (put.) pept 712 1041 nonstructural 12.7 kDa protein (put.) pept 1028 1282 nonstructural 9.7 kDa protein (put.) pept 1297 > 1299 integral membrane protein site 1 6 transcription start consensus 4.9 and 4.8 kD proteins site 631 636 transcription start consensus 12.7 kD protein site 899 904 transcription start consensus 9.5 kD protein BASE COUNT 371 a 202 c 257 g 469 t ORIGIN 1 ccaaacatca gtggcaccag atttgtcact tgattatata aatgttacat tcttggacct 61 acaagatgaa atgaataggt tacaggaggc aataaaagtt ttaaatcaga gctacatcaa 121 tctcaaggac attggtacat atgagtatta tgtaaaatgg ccttggtatg tatggctttt 181 aattggcttt gctggtgtag ctatgcttgt tttactattc ttcatatgct gttgtacagg 241 atgtgggact agttgtttta agatatgtgg tggttgttgt gatgattata ctggacacca 301 ggagttagta attaaaacat cacatgacga ctaagttcgt ctttgattta ttggctcctg 361 acgatatatt acatcccttc aatcatgtga agctaattat aagacccatt gaggtcgagc 421 atattataat agctaccaca atgcctgctg tttagtgggt actgtgtctt atataactag 481 taaacctgta atgccaatgg ctacaaccat tgacggtaca gattatacta atattatgcc 541 tagtactgtt tctacaacag tttatttagg ctgttctata ggtattgaca ctagcaccac 601 tggttttacc tgtttttcac ggtactagtt ccaaaccata ttataattta ggtagacctt 661 ataactttaa gcattattaa ttgccaaagt ttctaaggtc acgccctagt aatggacatc 721 tggagacctg agattaaata tctccgttat actaacggtt ttaatgtctc agaattagaa 781 gatgcttgtt ttaaatttaa ctataaattt cctaaagtag gatattgtag agttcctagt 841 catgcttggt gccgtaatca aggtagcttt tgtgctacac tcactcttta tggcaaatcc 901 aaacattatg ataaatattt tggagtaata actggtttta cagcattcgc taatactgta 961 gaggaggctg ttaacaaact ggttttctta gctgttgact ttattacttg gcggagacag 1021 gagttaaatg tttatggctg atgcttattt tgcagacact gtgtggtatg tggggcaaat 1081 aatttttata gttgccattt gtttattggt tataatagtt gtagtggcat ttttggcaac 1141 ttttaaattg tgtattcaac tttgcggtat gtgtaatacc ttaggactgt ccccttctat 1201 ttatgtgttt aatagaggta ggcagtttta tgagttttac aacgatgtaa aaccaccagt 1261 tcttgatgtg gatgacgttt agttaatcca aacattatg //