GenBank-Updates@genbank.bio.net (09/14/90)
LOCUS SRGMDH 4636 bp ds-DNA PLN 14-SEP-1990
DEFINITION S.vulgare NADP malate dehydrogenase gene, compete cds.
ACCESSION M31965
KEYWORDS NADP malate dehydrogenase.
SOURCE S.vulgare (haplotype 2n) 5 day old leaf mesophyll cell DNA.
ORGANISM Sorghum vulgare
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
Commelinidae; Cyperales; Poaceae.
REFERENCE 1 (bases 1 to 4636)
AUTHORS Luchetta,P., Cretin,C. and Gadal,P.
TITLE Structure and characterization of the Sorghum vulgare gene encoding
NADP-malate dehydrogenase
JOURNAL Gene 89, 171-177 (1990)
STANDARD full staff_entry
COMMENT Draft entry and computer-readable sequence [1] kindly submitted by
P.Luchetta, 02-MAR-1990.
FEATURES from to/span description
pept 647 783 NADP-malate dehydrogenase, exon 1
873 963 NADP-malate dehydrogenase, exon 2
1461 1547 NADP-malate dehydrogenase, exon 3
1643 1727 NADP-malate dehydrogenase, exon 4
1984 2165 NADP-malate dehydrogenase, exon 5
2420 2490 NADP-malate dehydrogenase, exon 6
2570 2660 NADP-malate dehydrogenase, exon 7
2749 2823 NADP-malate dehydrogenase, exon 8
2912 3013 NADP-malate dehydrogenase, exon 9
3100 3222 NADP-malate dehydrogenase, exon 10
3303 3371 NADP-malate dehydrogenase, exon 11
3456 3524 NADP-malate dehydrogenase, exon 12
3619 3672 NADP-malate dehydrogenase, exon 13
3765 3818 NADP-malate dehydrogenase, exon 14
pre-msg 603 4636 NADP-malate dehydrogenase mRNA and introns
IVS 784 872 NADP-malate dehydrogenase intron A
IVS 964 1460 NADP-malate dehydrogenase intron B
IVS 1548 1642 NADP-malate dehydrogenase intron C
IVS 1728 1983 NADP-malate dehydrogenase intron D
IVS 2166 2419 NADP-malate dehydrogenase intron E
IVS 2491 2569 NADP-malate dehydrogenase intron F
IVS 2661 2748 NADP-malate dehydrogenase intron G
IVS 2824 2911 NADP-malate dehydrogenase intron H
IVS 3014 3099 NADP-malate dehydrogenase intron I
IVS 3223 3302 NADP-malate dehydrogenase intron J
IVS 3372 3455 NADP-malate dehydrogenase intron K
IVS 3525 3618 NADP-malate dehydrogenase intron L
IVS 3673 3764 NADP-malate dehydrogenase intron M
BASE COUNT 1255 a 1044 c 993 g 1344 t
ORIGIN
1 aggcctagtc aaaaagtaaa tgtgattatt tacaaacatt gtctctacat tttgcatggc
61 ttcaaaacca aagatcgcac acacttttgc caaaattttg ccaccgttgc taaccaatcg
121 atgtgtaacg atgagaagtg ccatcacact ctctgaaaag actcaggccc tggcactggc
181 aggaccgcag gaaaggcact gagcaaagat gatggtcgtg ggagaataaa caaccttttt
241 ttttttttgc ctttgtaata aatgtccccg ccgtctctca cgtagtacgt agtttcggtg
301 tggctttgtt ttaaaaggga accaaatcta ccaatgagtc tttttaaaaa gaagaaaaat
361 actggtcagc aaaactgaga ttctccagca acgaaaatga aaaagacttg gttgtcagtg
421 ttaaccacca ccaggatagc aggcgtgtgg acgtacaaga tgccgaacag tcgctgtcgc
481 gcgacgtgtc ccgcgccggg cggtccgctc gccttgcctg ccgctaatcc aattcctacg
541 cgcgctcctg ctcctgcgta caaccagaga ggctataatc tcctccactc cctcccctgt
601 agctgcagcc cgttccactc ctatccatcc gtgctccagc tccaccatgg gcctctcaac
661 ggcttactcc ccggtcggat cgcacctcgc gccggcgcct ctcgggcacc gtcgctccgc
721 ccagctccac cgcccgcgcc gggccctgct cgccaccgtc cgatgctccg tcgacgccgc
781 caagtgagta gtagtatact acccggacgt ggacatgaat gcgtgccatt tatcaactac
841 taggctgact agccccctat acgttgatgc aggcaggtgc aggatggcgt ggcgacggcg
901 gaggcgccgg cgacgcggaa ggactgcttc ggggtcttct gcaccaccta cgacctcaag
961 gcggtgagtc cctcccttcg cctcaggcgg tggtggtcct ccccggttcc cggtccggcc
1021 tccccgtgtg tgttcgctga aatgctccat cgacttttgc cttttgcttc aaactcaaag
1081 tagaatccct tttccaccta aagctagcaa cgttgctttt ctccaaaaga gaaaaaaaaa
1141 gaaaaagcta gcacgtcgtt ggtgtcatgg tgtggaccgt tggaggtgtg gtgtggatat
1201 atgctacgat actggatagc ttgcactcat atcaacagct ggcgttatgc ctctataaat
1261 aaaaataaat atcatacaga ccaccaaaac caaagcgcag ggtggagtgc cacgcatgag
1321 acgctgcact gcacgccact gctgcttgac ttaatttggt ttctaattaa cttgctgctg
1381 tatatatcgt catatagtag tacagtacta acaatctgtc atcctatgcc attgaatgga
1441 ttgggagttg ggacacacag gaagacaaga ccaagtcgtg gaagaagcta gtgaacattg
1501 ctgtgtcagg cgcggctggg atgatatcga accacctgct gttcaaagta actaaatcgt
1561 ttactgactc tacttgtttc ctatcttgag ttgcagtatt gtaatgctga ccattcattt
1621 tattaacaca aaaaaaattc agcttgcctc tggtgaggtt ttcggacaag accaaccaat
1681 agcactgaag ttacttggtt cagagagatc gtttcaagct ctcgaaggtg aatgactgac
1741 tgcctcttct tctttctgcc ttgctatctg agaagaagaa tcaattcata ttttccactc
1801 actctgttcc aaaagctaaa atgccttata tataatttgg aacaggggga gtacatacgt
1861 atagctttag tttcaagctg cccttacagc ttccagtgtt gtactctctt atatcaatgg
1921 attactgtga cagtgaatat ttatcacttc ttcctcatgt gctctcaaaa actgcaactg
1981 taggtgttgc tatggaactg gaggactcgc tatatccatt gctgagggaa gtcagcattg
2041 gtatagatcc ttatgaggtc tttgaagatg tagattgggc ccttcttatt ggtgctaagc
2101 cccgaggtcc tggcatggag cgagctgcgt tactggatat caatggtcaa atctttgctg
2161 atcaggtttc ttttgcactc tgttcctcct ttcttctcaa gtactatgtc accaaattgt
2221 aagaagtcct ctcaggaaag gtgccaagaa gcattttctg aaacttcaac ctcaaatttt
2281 aaggattcct aagcattaga acctgcaaat tgccaaaacc agaaaccaag tacaaatttg
2341 agtcaaagcc cacctaaata aacgaccaga gtaacctgtt attcttgtta ttatctgaat
2401 tttttttaaa ttgtgtcagg ggaaagcact taatgccgtg gcctcgaaga acgtgaaagt
2461 cttagttgtt ggaaatccct gtaacactaa gtacggacat tgattgttca ccaagattaa
2521 cgattttatg tcatcaccat gtcttagttg tggcttgccc ttgatgcagt gcgttaattt
2581 gcttgaaaaa tgctccagac ataccagcaa aaaattttca tgcactgacg aggttggatg
2641 aaaatagagc aaagtgccag gtgactgacg ttgaacctta ttatgtctcg tccttccatt
2701 ccaaacagga aaacagatta agaaatcaca cacaatctcc ttttgtagct agcactcaaa
2761 gcaggtgtat tttatgacaa agtatcaaac gtgactattt gggggaacca ttcgacaact
2821 caggtgaagt tttgcattat aaattaaatg agcagactat tttgcagaca catttcttcg
2881 ctgaatggtt ggcactaact tctctgtgta ggttcctgat ttcttgaatg ccaaaattga
2941 tgggagacca gtgaaagaag tcattaagga taccaagtgg ttagaagaag agttcaccat
3001 tacggttcaa aaggtatgac aatccatttg gagtgtctgt tactcggata aataaacaag
3061 gttgtgacca taattcgttt cattcttata tctaaacagc gtggaggtgc gctcatccaa
3121 aaatggggca gatcttcagc tgcatcaacc gctgtatcaa tagcggatgc tattaaatcc
3181 ctggtaactc ctaccccaga aggcgactgg ttctccacag gggtaagttt tgatgccttt
3241 gaattgatca cagctttatt tcggcattcc tctaatggaa aaaagtaata aaaaaaacac
3301 aggtttatac gactggaaat ccttatggca tagcagagga tatcgtgttc agcatgccat
3361 gcagatcgaa ggtatgatct actaatcaaa ttgtccttat tatttttgtc ctaagataag
3421 gtaccactcc aatgatcgta aaattcttcc aacagggtga tggtgattac gaactagcta
3481 ctgatgtgtc aatggacgat tttctctggg aacggattaa aaaggtaagg gctataggaa
3541 ctgccatcac tgatatgctg agaatataag cagcactaga gattttaccc taacagttgg
3601 ccctgtacat attttcagag tgaagctgaa ttgcttgctg agaagaaatg cgttgcccat
3661 cttactggag aggtatgtca cagtgacgta ttttatttag cttaaaaaga gagaaaccgt
3721 gccggaaagg attggcttag ctttttctgt ttgtgcaaat gcaggggaat gcatattgtg
3781 atgttccgga ggataccatg ctaccgggag aagtgtagtt tagttacaga gaagcaatag
3841 caggggaatg catttgtcta tactatagct gagactcgag agaaacagct gcttgcaaga
3901 tgcagcaact acttttactt atatatatat attgtttata ttctgtaccc gctcagagcg
3961 ttgtgtgcac acgctgtgtg attccgggac cgtctttacg atcgttttgc cttttttggg
4021 ccataccgct tcgctcccgt gttgcgcttc cattattgag ttattaccac tctgttttat
4081 aatatttatt actgccgaga ttttgtgtag atattacaat cttgtgtttg gttgtgtctc
4141 tgctcatacg caagtgctgc tgcaactctt gtttttattc acatttagtt acaactgtgt
4201 tattttgtag taacgacgtg ttatatgtgc tgttacaatc gtattgtaac tctattcttt
4261 tcctcatttc tccttttact gtacttattt aacagaatta gtcgattttc agtcacagaa
4321 taatattttc tctcacaaca aatcaacatc aatcagtgtc gtcgaatctc tacctcgtgg
4381 agccatggac cgttgtctcg tgggcaatcc caagtgagcc ctatatgagg cagttctttc
4441 gctaatcatt tttaaaacat ataccacaag acccatacac cgattatgtt tgaaactttc
4501 aatgctagca acttcatcga catacagggc tcacacgtta gtaaaaaaat gtgaattaag
4561 cactgtctct gcattttgca tggcttcaaa caaaagatct cgcactttga ctacatttcg
4621 ccactgctgc taaggc
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