GenBank-Updates@genbank.bio.net (09/17/90)
LOCUS S13CG 5386 bp ss-DNA circular PHG 17-SEP-1990 DEFINITION Bacteriophage S13 circular DNA, complete genome. ACCESSION M14428 M25197 KEYWORDS capsid protein; complete genome; overlapping genes; spike protein. SOURCE Bacteriophage S13 DNA. ORGANISM Bacteriophage S13 Viridae; ss-DNA nonenveloped viruses; Microviridae. REFERENCE 1 (bases 841 to 1035) AUTHORS Grosveld,F.G. and Spencer,J.H. TITLE The nucleotide sequence of two restriction fragments located in the gene AB region of bacteriophage S13 JOURNAL Nucleic Acids Res. 4, 2235-2252 (1977) STANDARD simple staff_entry REFERENCE 2 (bases 1 to 5386) AUTHORS Lau,P.C.K. and Spencer,J.H. TITLE Nucleotide sequence and genome organization of bacteriophage S13 DNA JOURNAL Gene 40, 273-284 (1985) STANDARD full staff_review COMMENT Draft entry and clean copy of sequence in [1] kindly provided by J.H.Spencer (20-JUL-1987) FEATURES from to/span description pept 37 1605 A' gene pept 64 1605 A gene pept 580 1605 A* gene pept 1158 1520 B gene pept 1520 1690 K gene pept 1602 1862 C gene pept 1859 2317 D gene pept 2037 2312 E gene pept 2317 2433 J gene pept 2470 3753 F gene (capsid protein) pept 3864 4391 G gene pept 4400 5386 H gene (spike protein) BASE COUNT 1288 a 1137 c 1251 g 1710 t ORIGIN 219 bp upstream of AluI site. 1 ccgtcaggat tgacaccttt ctaattgtgt gatttcatgc ctccaaactt tggaggcttt 61 tttatggttc gttcttatta cccttctgaa tgtcacgctg attattttga ctttgagcgc 121 atcgaggctc ttaaacctgc tattgaggct tgtggcattt ctactctttc tcaatcccct 181 atgcttggct tccataagca gatggataac cgcattaagc tcttggaaga gattctgtct 241 tttcgtatgc agggcgttga gttcgataat ggtgatatgt atgtttacgg ccataaggct 301 gcttctgacg ttcgtgatga gtttgtatct gttactgaga agttaatgga tgaattggca 361 caatgctaca atgtgctccc ccaacttgat attaataaca ctatagacca cccgcccgaa 421 ggggacgaaa aatggttttt agagaacgag aagacggtta cgcagttttg ccgcaagctg 481 gctgctgaac gccctcttaa ggatattcgt gatgagtata attaccccaa aaagaaaggt 541 attaaggatg agtgttcaag attgctggag gcctccacta tgaaatcgcg tagaggcttt 601 actattcagc gtttgatgaa tgcaatgcgc caggctcatg ctgatggttg gtttatcgtt 661 tttgacactc tcacgttggc tgacgatcga ttagaggcgt tttatgataa ccccaatgct 721 ttgcgtgact attttcgtga tattggtcgt atggttcttg ctgccgagcg tcgcaaggct 781 aatgactcac acgccgactg ctatcagtat ttttgtgtgc ctgagtatgg tacagctaat 841 ggccgtcttc atttccatgc ggtgcatttt atgcggacac ttccttcagg tagcgttgac 901 cctaactttg gtcgtcgggt acgcaatcgc cgccagttaa atagcttgca aaatacgtgg 961 ccttatggtt acagtatgcc catcgcagtt cgctacacgc aggacgcttt ttcacgttct 1021 ggttggttgt ggcctgttga tgctaaaggt gagccgctta aagctaccag ttatatggct 1081 gttggtttct atgtggctaa atatgttaac aaaaagtcag atatggacct tgctgctaaa 1141 ggtctaggag ctaaagaatg gaacaactca ctaaaaacca agctgtcgct acttcccaag 1201 aagcttttca gaatcagaat gagccgcaac ttcgggatga aaatgttcac aatgacaaat 1261 ctgtccatgg agtgcttaat ccaacttacc aagctgggtt acgacgcgac gccgttcaac 1321 cagatattga agcagaacgc aaaaagagag atgagattga ggctgggaaa agttactgta 1381 gccgacgttt tggcggcgca acctgtgacg acaaatctgc tcaaatttat gcgcgcttcg 1441 ataaaaatga ttggcgtatc caacctgcag agttttatcg cttccatgac gcagaagtta 1501 acactttcgg atatttctga tgagtcgaaa aattatcttg ataaagcagg aattactact 1561 gcttgtttac gaattaaatc gaagtggact gctggcggaa aatgagaaaa ttcgacctat 1621 ccttgcgcag ctcgagaagc tcttactttg cgacctttcg ccatcaacta acgattctgt 1681 caaaaactga cgcgttggat gaggagaagt ggcttaatat gcttggcacg ttcgtcaagg 1741 actggtttag atatgagtca cattttgttc acggtagaga ttctcttgtt gacattttaa 1801 aagagcgtgg attactatct gagtccgatg ctgttcaacc actaataggt aaaaaatcat 1861 gagtcaagtt actgaacaat ccgtacgttt ccagaccgcg ctggcctcta ttaagctgat 1921 tcaggcttct gccgttttgg atttaaccga agatgatttc gattttctga cgagtaacaa 1981 agtttggatt gctactgacc gctctcgtgc tcgtcgctgc gttgaggctt gcgtttatgg 2041 tacgctggac tttgtgggat accctcgctt tcctgctcct gttgagttta ttgctgccgt 2101 cattgcttat tatgttcatc ccgtcaacat tcaaacggcc tgtctcatca tggaaggcgc 2161 tgaatttacg gaaaacatta ttaatggcgt cgagcgtccg gttaaagccg ctgaattgtt 2221 cgcgtttacc ttgcgtgtac gcgcaggaaa cactgacgtt cttactgacg cagaagaaaa 2281 cgtgcgtcaa aaattacgtg cagaaggagt gatgtaatgt ctaaaggtaa aaaacgttct 2341 ggcgctcgcc ctggtcgtcc gcagccgttg cgaggcacta aaggcaagcg taaaggcgct 2401 cgtctttggt atgtaggcgg tcaacaattt taattgcagg ggcttcggcc ccttacttga 2461 ggataaatta tgtctaatgt tcaaactggc gctgagcgta tgccgcatga cctttcccat 2521 cttggcttcc ttgctggtca gattggtcgt cttattacta tttcaactac tccggttatc 2581 gctggtgact ccttcgagat ggacgccgtt ggcgctctcc gtctttctcc attgcgtcgt 2641 ggccttgcta ttgactctac tgtagatatt tttacttttt atgtccctca tcgtcatgtt 2701 tatggtgagc ggtggattaa gtttatgaag gatggcgtta atgccactcc tcttccgacc 2761 gttaacacta cttcttatat tgaccatgcc gcttttcttg gcacgattaa ccctgatacc 2821 aataaaattc ctaagcattt gtttcagggt tatttgaata tctataacaa ctattttaaa 2881 gcgccgtgga tgcctgaccg caccgaggct aaccctaacg agcttaatga agatgatgcc 2941 cgttatggtt tccgttgctg ccatcttaaa aacatttgga ctgctccgct tcctcctgag 3001 actgagcttt ctcgccgaat gacgacttct accacgtcta ttgacattat gggtctgcaa 3061 gctgcttatg ctaatttgca tactgaccaa gaacgtgatt acttcatgca gcgttaccgt 3121 gatgttattt cttcatttgg aggtaaaacc tcttatgacg ctgacaaccg tcctttactt 3181 gtcatgcgct ctaatttctg ggcatctggc tatgatgttg atggaactga ccaaacgtcg 3241 ttaggtcagt tttctggtcg tgttcaacag acctataaac attctgtgcc gcgttttttt 3301 gttcctgagc atggcactat gtttactctt gcgcttgttc gttttccgcc tactgcgact 3361 aaagagattc agtatcttaa tgctaaaggt gctttgactt ataccgatat tgctggcgac 3421 cctgctttgt atggcaactt gccgccgcgt gaaatttcta tgaaggatgt tttccgttct 3481 ggtgattcat ctaagaagtt taagattgct gagggtcaat ggtatcgtta tgcaccttct 3541 tatgtttctc ctgtatatca ccttcttgaa ggcttcccat ttattcagga accgccttcc 3601 ggtgatttgc aagaacgtgt acttattcgc catcatgact atgaccactg ttttcagtcc 3661 gttcagttgt tgcagtggaa tagtcaggtt aaatttaatg tgaccgttta tcgcaatctg 3721 ccgaccactc gtgattcaat catgacttcg tgataaaaga ttgagtgtga ggttataacg 3781 ccgaagcggt aaaaatttta atttttgccg ctgaggggtt gaccaagcga agcgcggtag 3841 gttttctgct taggagttta atcatgtttc agacttttat ttctcgccat aattcaaact 3901 ttttttctga taagctggtt gctagttctg ttactccagc ttctttagca cctgttttac 3961 agacacctaa agctacatcg tcaacgttat attttgatag tttgacggtt aatgctggta 4021 atggtggttt tcttcattgc attcagatgg atacatctgt caacgccgct aatcaggttg 4081 tttctgttgg tgctgatatt gcttttgatg ccgaccctaa attttttgcc tgtttggttc 4141 gctttgagtc ttcttcggtt ccgactaccc tcccgactgc ctatgatgtt tatcctttga 4201 atggtcgcca tgatggtggt tattataccg tcaaggactg tgtgactatt gacgtccttc 4261 cccgtacgcc gggcaataat gtttatgttg gtttcatggt ttggtctaac tttaccgcta 4321 ctaaatgccg cggattggtt tcgctgaatc aggttattaa agtgattatt tgtctccagc 4381 cacttaagtg aggtgattta tgtttggtgc tattgctggc ggtattgctt ctgctcttgc 4441 tggtggcgtc atgtctaaat tgtttggagg cggtcaaaaa gccgcctccg gtggtattca 4501 aggtgatgtt cttgctaccg ataacaatac tgtaggcatg ggtgacgctg gtattaaatc 4561 tgctattcaa ggttctaatg ttcccaactc tgatgaggcc gcacccagtt ttctttctgg 4621 tgctatggct aaagctggta aaggacttct tgaaggtacg ttgcaagctg gcacttctgc 4681 cgtttctgat aagttgcttg atttggttgg gcttggtggc aagtctgccg ctgataaagg 4741 aaaggatact cgtgattatc ttgctgctgc atttcctgag cttaatgctt gggagcgtgc 4801 tggtgctggt gcttcctctt ctgctatagt tgacgccgga tttgagaatc aaaaagagct 4861 tactaaaatg caattggaca atcagaaaga gattgccgag atgcaaaatg agactcaaaa 4921 agagattgct ggcattcagt cggcgacttc acgccagaat acgaaagacc aggtatatgc 4981 acaaaatgag atgcttgctt atcaacagaa ggagtctact gctcgcgttg cgtctattat 5041 ggaaaatacc aatctttcca agcaacagca ggtttccgag attatgcgcc agatgcttac 5101 gcaagctcaa acggctggtc agtattttac caatgaccaa atcaaagaaa tgacccgtaa 5161 ggttagtgct gaggttgact tagttcatca gcaaacgcag aatcagcggt atggttcttc 5221 tcatattggc gctactgcaa aggatatttc taatgtcgtc actgatgctg cttctggtgt 5281 ggttgatatt tttcatggta ttgataaagc tgttgccgat acttggaaca atttctggaa 5341 agatggtaaa gctgatggca ttggctctaa tttgtctagg aagtaa //