GenBank-Updates@genbank.bio.net (09/19/90)
LOCUS THARGAA 2914 bp ds-DNA BCT 19-SEP-1990
DEFINITION T. acidophilum 16S rRNA gene.
ACCESSION M38637 M20822
KEYWORDS 16S ribosomal RNA.
SOURCE T.acidophilum (strain 122-1B2) clone pTH2-2.
ORGANISM Thermoplasma acidophilum
Prokaryota; Bacteria; Mendosicutes; Archaeobacteria;
Thermoplasmales.
REFERENCE 1 (bases 1 to 2914)
AUTHORS Ree,H.K., Cao,K., Thurlow,D.L. and Zimmermann,R.A.
TITLE The structure and organization of the 16S rRNA gene from
Archaebacterium Thermoplasma acidophilum
JOURNAL Can. J. Microbiol. 35, 124-133 (1989)
STANDARD full staff_entry
COMMENT Draft entry and printed sequence for [1] kindly submitted by
H.K.Ree, 18-SEP-1990.
FEATURES from to/span description
rRNA 979 2449 16S ribosomal RNA
signal 784 792 promoter (put.)
signal 2450 2505 signal (put.)
BASE COUNT 739 a 655 c 844 g 676 t
ORIGIN
1 cccgggcctg gttatagatg aggccatgca acagggttcc gcttcgaggt ctgggacgtc
61 atagaacaca aggccatctt ccttgatgct cctgaatacc tctacgatct tctggccctc
121 ataggatcga aggagcggta cgtgataaag cgcgtataca caaagaagga gaacaagaag
181 cttcctgagg agaacgttgc ggtcatctcc acggacaagc tgtcgcttat agctggaaaa
241 tacgttggca aggatgatcc ggcagcggtg gtaaggatac agtccggtct tccggccgct
301 ggagaatcgc ttgaggcctt tgctttcccg tatctagtca gcggctggat gaggggatcg
361 ttcaatggcc cgctgatgcc cgtaggcatg aaggatgcca agatgacgag gtttgacggg
421 ccacccaggg tggtcgccct cggttacgtt ctgaagtcag gcaagcttga ggggcctgtt
481 gacatgttcg atgatccggc cttcgactac gccaggcgcg ttgcagggga gatgacggat
541 cacctcagga ggatgggccc attcgagccc cacaggcttc cggaccagga gatggagtac
601 actacgctcc ccgtggtcat ggagaagctc aaggacaggt ttgttgacat agagaaggaa
661 acgctggcca aataatcgta ttattttctt cattttcctt ggttttcaag attttttcag
721 ccagattctt attaacataa ttattttaga tttccctaga aaattggagt tccgcttcga
781 aagttatata tactgatttg ctattcttta ctttgcacat aacaggtatg gatgccaacc
841 tacctacgaa agagatgaat tacgcctgtg cgcgtttatg tgtctcttct tccagggttg
901 gtaaatatgg agtagtgagt cagtaatgct cacttctgac aggtagatgc cagccgctaa
961 ttccaattga gtgttttaac tccggtcgat cctgccggcg gtcactgcta tcaggttccg
1021 actaagccat gcaagtcatg gggccgtaag gcaccggcga acagctcagt aacacgtgga
1081 taatttaccc tcaggcgggg cataacctcg ggaaactgag gctaattccc catagtcatt
1141 acaaactgga atggttgtaa tgatgaaagc ttctgcacct gaggataagt ctgcggccta
1201 tcaggtagta ggtggtgtaa aggaccacct agcctaagac gggtacgggc cctgaaaggg
1261 ggagcccgga gatggactct gagacaacag tccaggccct acggggcgca gcaggcgcga
1321 aaactgtgca atgcgcgaaa gcgcgacacg gggagcctga gtgccttgac tttttgtcaa
1381 ggcttttctg atgcctaaaa agcatcagga ataagggctg ggcaagacgg gtgccagccg
1441 ccgcggtaac acccgcagct cgagtggtga tcacttttat tgagtctaaa gcgttcgtaa
1501 ccggtcttat aaatcttcag ataaattctt ccgcttaacg gaagaacttc tgaagagact
1561 gtaagacttg ggaccgggtg aggttgaatg tactttcagg gtaggggtaa aatcctgtaa
1621 tcctgaaagg acgaccggtg gcgaaagcgt tcaactagaa cggatccgac ggtgagggac
1681 gaaggctagg ggagcaaacc ggattagata cccgggtagt cctagctgta aacgctgccc
1741 acttggtgtt gcttctccgt tgaggggggg cagtgccgta gcgaaggtgt taagtgggtc
1801 acttggggag tacggccgca aggctgaaac ttaaaggaat tggcggggga gcaccgcaac
1861 gggaggagcg tgcggtttaa ttggattcaa cgccggaaaa ctcaccggga gcgaccttcg
1921 gatgagggtc aacctgacga atttacccga tagaaggaga ggtggtgcat ggccgtcgtc
1981 agctcgtacc gtagggcgtt cacttaagtg tgataacgag caagaccccc atctctaatt
2041 gccagactgt ctttgcgggc agaggcactt tagagggacc gccagcgcta agctggagga
2101 aggaggggtc gacggcaggt cagtacgccc cgaatctccc gggctacacg cgcgctacaa
2161 aggacgggac aatgagttgc aacctcgaaa ggggaagcta acctcgaaac ccgttcgtag
2221 tcaggactga gggctgtaac tcgccctcac gaatgtggat tccgtagtaa tcgtaggtca
2281 acagcctacg gtgaatatgc ccctgctcct tgcacacacc gcccgtcaaa ccatccgagc
2341 tggtgttgga tgagggtccg tcctctggat ggattcgaat ctgatgtcag tgaggagggt
2401 taagtcgtaa caaggtatcc gtaggggaac ctgcggatgg atcacctcca agttagaaca
2461 ctggctggca tctgcccaga ccataccttt aaatttcctt tttttataat gttttgtttc
2521 ggtgatttgg tgtcaattga agataaggct gaggaaattc agcagaatct ggagagaagg
2581 ttttccagca ttgggaaggg gaagtatgcg agaatcctcc gcatggcgag aaagccgacg
2641 agggatgaat acataaaggt gctggtaata accgcagttg gtcttctcat cataggtggc
2701 cgttggtttc ataatatacc tgcttatgga tgtttatttc aagatacctt aaggtggaat
2761 ccatggaaaa cagcaaggaa tatgaatgga tatcgtctga cgttccagac cgcatagagg
2821 tcggtgctgg cgaaacgatc aacctgcgat tcagcataaa gaacattcag aatgtgaaga
2881 ggaagttcag ggtcagcata ggttacagcg tcga
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