GenBank-Updates@genbank.bio.net (09/22/90)
LOCUS PVYHELCO 2748 bp ss-RNA VRL 22-SEP-1990
DEFINITION Potato virus Y helper component mRNA, 5' end.
ACCESSION M38377 M37146
KEYWORDS helper component.
SOURCE Potato virus Y (strain C), cDNA to viral RNA, clones pPVCdT1 and
pPVCHC17.
ORGANISM Potato virus Y
Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses;
Potyvirus.
REFERENCE 1 (bases 944 to 2400)
AUTHORS Thornbury,D.W., Patterson,C.A., Dessens,J.T. and Pirone,T.P.
TITLE Comparative sequence of the helper component (HC) region of potato
virus Y and a HC-defective strain, potato virus C
JOURNAL Virology (1990) In press
STANDARD full staff_entry
REFERENCE 2 (bases 1 to 2748)
AUTHORS Thornbury,D.W., Patterson,C.A., Dessens,J.T. and Pirone,T.P.
JOURNAL Unpublished (1990)
STANDARD full staff_entry
COMMENT Draft entry and computer-readable sequence for [2] kindly submitted
by D.W.Thornbury, 25-JUL-1990.
FEATURES from to/span description
pept 180 > 2748 helper component
BASE COUNT 838 a 538 c 638 g 734 t
ORIGIN
1 aaacaactca atacaacata agaaaaacaa cgcaaaaaca cttacaaacg ctcattttca
61 ctcaagcaac ttgctaaatt tcagcttttg tctttttctt gcgattctct ttaacgatat
121 tgaaaaccgt cctagttcga caagctattt cacttctacc aactattagc atattctcca
181 tggcaatcta catgtcgaca atctgtttcg gttcaattga atgtaaatta ccgtactcac
241 ccgcctcttg cggacatgtc actgaagagc gagaggtgtt ggcttctgtt gagcctttca
301 tggatctgga ggcacagctt agcgcacgat tactcaggca aaagcatgca accgttcgtg
361 tattgaagaa cggtacttgt gcgtatcgat acaagactga cgcgcagata gtgcgtattc
421 agaagaaatt ggagaggaaa gagagagatg agtatcactt tcagatggcc gctccaagta
481 ttgtgtcaaa gattactatt gctggtggag atcccccatc gaagtatgag ccacaaacgc
541 cgaaaagagt cattcacacg actccaaggg tgcgtaaagt taagaaacac tccataataa
601 agttgacgga aagtcaaatg aatcacctta tcaagcaggt gaagcgaatt atgtcagcta
661 agaaagggtc tgtccaccta atcaataaga agagtacgca tgttcaatat aaggagatac
721 ttggaacaac tcgcgcggct gttcgtactg cacatatgat gggtttgcga cgaagagtgg
781 acttccgatg tgatatgtgg acaaccgagc gtttgaaatg tctcgctcga acagataaat
841 ggtcaaatcg agttcacacc atcaacatac gaaagggcga tagtggagtc atcttgaacg
901 ctgacagcct caaaggtcac tttgggagaa gttcgggagg cttattcata gtgcgtggat
961 cacatgaagg gaaattgtat gacgcacgtt ccaaagttac tcagggtgtt ttgaactcga
1021 tggttcagtt ctcgaatgct gagaattttt ggaagggtct ggacgacaac tgggcacgaa
1081 tgagataccc ttcagatcat acatgtatag atggtttacc agtcgaggac tgcggtaggg
1141 tcgctgcatt gatgacacac agcattctgc cgtgttacga gataacctgc cccacctgcg
1201 ctcaacaata tgccaacttg ccagccagcg atctgttcaa gctgctgcat aaacatgcaa
1261 gggatggttt gagtcgattg ggatcggata aagacagatt tgtgcatgtt aataagttct
1321 tggtagcgtt ggagcatcta actgaaccag ttgatttgaa tctcgagctt ttcaatgaga
1381 tatttaaatc cataggggag aagcagcaag caccattcaa gaatttgaat gtcttaaaca
1441 atttctttct aaaaggaaaa gaaaatacag ctcatgaatg gcaggtggct caattgagtt
1501 tgctcgaatt agcaaggttc cagaagaata gaactgataa catcaagaaa ggtgacatat
1561 ctttcttcag gaataaacta tctgccaaag caaactggaa tctgtatttg tcgtgcgaca
1621 atcagttgga taaaaatgca aacttcttgt ggggacaaag ggagtatcat gctaagcggt
1681 ttttctcaaa cttctttgag gaagttgatc cagcaaaggg atactcagca tatgaaatcc
1741 gcaagcatcc gaatggaact aggaagctct caattggtaa cttggttgtc ccacttgatt
1801 tagctgagtt tagacagaag atgaaaggtg actataggaa acaaccaggg gtcagcaaaa
1861 ggtgcacgag ttcgaaagat ggtaattatg tgtatccctg ctgttgcaca acacttgacg
1921 atggctcagc cattgaatca acattctatc cgccaactaa aaagcacctt gtaataggca
1981 atagtggtga ccaaaaatat gttgatttac caaaagggga ttcggagatg ttgtacatcg
2041 ccaagcaagg ttattgctat atcaacgtat ttcttgcaat gctgattaac gtcagcgagg
2101 aggacgcgaa ggatttcaca aagaaagttc gcgacatgtg tgtgccaaag cttggaacct
2161 ggccaactat gatggatttg gcgactactt gtgctcaaat gagaatattc tatcctgacg
2221 tgcatgatgc agaactgccc agaatattag ttgaccatga cactcaaacg tgtcacgtgg
2281 ttgactcttt tggttcgcaa acaactgggt atcatattct aaaagcatct agtgtgtctc
2341 aacttatctt gtttgcaaat gatgagttag aatctgaaat aaaacactat agagttggtg
2401 gtgttcctaa tgcatgccct gaacttgggt ccacaatatc acctttcaga gaaggaggag
2461 ttataatgtc tgagtcggca gcgctaaaac tgcttctaaa ggggattttc agacctaagg
2521 tgatgagaca gttgctgttg gatgagcctc acctattgat tctatcaata ttatcccctg
2581 gcatactgat ggctatgtat aataatggga tttttgaact tgcggtgagg ttgtggatta
2641 atgagaaaca atctatagcc atgatagcat cgttgctgtc agctttagct ctacgagtgt
2701 cagcggcaga aacactcgtc gcacagagga tcataattga tgctgcag
//