GenBank-Updates@genbank.bio.net (09/23/90)
LOCUS ECODEOD3 455 bp ds-DNA BCT 23-SEP-1990
DEFINITION E.coli deoD gene 3'terminus and downstream region.
ACCESSION X05629
KEYWORDS deoD gene; inverted repeat; terminator; unidentified reading frame.
SOURCE Escherichia coli.
ORGANISM Escherichia coli
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Enterobacteriaceae.
REFERENCE 1 (bases 1 to 455; enum. 1 to 455)
AUTHORS Larsen,J.E.L., Albrechtsen,B. and Valentin-Hansen,P.
TITLE Analysis of the terminator region after the deoCABD operon of
Escherichia coli K-12 using a new class of single copy number
operon-fusion vectors
JOURNAL Nucleic Acids Res. 15, 5125-5140 (1987)
STANDARD simple automatic
COMMENT *source: strain= K-12
EMBL features not translated to GenBank features:
key from to description
INVREP 62 69 imp.inverted repeat A
INVREP 70 77 imp.inverted repeat A'
INVREP 80 91 imp.inverted repeat B
INVREP 96 107 imp.inverted repeat B'
TERM 80 107 terminator deot
PRM 151 156 pot.promoter
TRANSCR 161 >455 pot.transcript
INVREP 277 288 imp.inverted repeat C
INVREP 308 319 imp.inverted repeat C'
FEATURES from to/span description
pept < 1 48 deoD (15 AA)
pept 329 > 455 pot.ORF
site 347 455 putative VECTOR sequence lambda
BASE COUNT 104 a 109 c 112 g 130 t
ORIGIN
1 atgatcaaaa tcgcactgga atccgttctg ctgggcgata aagagtaatt gtgtttcgct
61 gcaaggcgat tgccttgtga agccggagcg ggagactgct ccggcttttt agtatctatt
121 catttttctc tccagcttga atattttcgc tatacttttc agtgaaatgt gttaataaat
181 ctattcaagt atctattcac gaatctattc attaatgagc gagctgactg atcttttact
241 gcaagggccg cgttctgccc cggaattgcg ccagcgtctg gcaatcagtc aggcgacgtt
301 ctcacgcctt gttgccagag aagatcgggt gattcgcttt ggtaaagcac gggcaacgcg
361 atatgcactg cagttcatgt cgttggcaag cgcccatacc ggttttatgt cacgcacacg
421 ggcgatgatg tcagcgcagt caaatgcccc cgcca
//