GenBank-Updates@genbank.bio.net (09/23/90)
LOCUS DROSUHW 5803 bp ds-DNA INV 23-SEP-1990 DEFINITION Drosophila melanogaster su(Hw) gene for suppressor of hairy wing. ACCESSION Y00228 KEYWORDS DNA-binding protein; finger protein; metal binding protein; su(Hw) gene; suppressor protein; zinc finger protein. SOURCE fruit fly (Drosophila melanogaster). ORGANISM Drosophila melanogaster Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Cyclorrhapha; Schizophora; Drosophiloidea; Drosophilidae. REFERENCE 1 (bases 1 to 5803) AUTHORS Corces,V. TITLE ; JOURNAL Unpublished (1988) see COMMENT for author address STANDARD simple automatic REFERENCE 2 (bases 1079 to 5200) AUTHORS Parkhurst,S.M., Harrison,D.A., Remington,M.P., Spana,C., Kelley,R.L., Coyne,R.S. and Corces,V.G. TITLE The Drosophila su(Hw) gene, which controls the phenotypic effect of the gypsy transposable element, encodes a putative DNA binding protein JOURNAL Genes Dev. (1988) In press STANDARD simple automatic COMMENT *source: strain=Canton S; **map: genomic location=88B,C; EMBL features not translated to GenBank features: key from to description TRANSCR 1079 5199 primary transcript MSG 1079 1122 Exon 1 IVS 1123 1674 Intron I MSG 1675 2547 Exon 2 SITE 2152 2295 acidic domain SITE 2347 2415 zinc finger domain 1 IVS 2548 2613 Intron II MSG 2614 3041 Exon 3 SITE 2623 2694 zinc finger domain 2 SITE 2710 2778 zinc finger domain 3 SITE 2797 2871 zinc finger domain 4 SITE 2893 2961 zinc finger domain 5 SITE 2992 3041 zinc finger domain 6, part 1 IVS 3042 3098 Intron III MSG 3099 3231 Exon 4 SITE 3099 3117 zinc finger domain 6, part 2 SITE 3133 3201 zinc finger domain 7 SITE 3217 3231 zinc finger domain 8, part 1 IVS 3232 3300 Intron IV MSG 3301 3491 Exon 5 SITE 3301 3354 zinc finger domain 8, part 2 SITE 3370 3438 zinc finger domain 9 SITE 3448 3491 zinc finger domain 10, part 1 IVS 3492 3559 Intron V MSG 3560 3684 Exon 6 SITE 3560 3584 zinc finger domain 10, part 2 SITE 3607 3680 zinc finger domain 11 IVS 3685 3744 Intron VI MSG 3746 5199 Exon 7 SITE 3796 3867 zinc finger domain 12 POLYA 5199 5199 polyA site [1 ] Author address Corces V., The John Hopkins University, Biology Dept.,, 34th Charles Sts.,, Baltimore, Md 21218. Submitted (12-SEP-1988) on tape to the EMBL data library. FEATURES from to/span description pept 1690 2547 Hw suppressor (AA 1 - 286) 2614 3041 Hw suppressor (AA 287 - 429) 3099 3231 Hw suppressor (AA 430 - 473) 3301 3491 Hw suppressor (AA 474 - 537) 3560 3684 Hw suppressor (AA 538 - 578) 3746 4845 Hw suppressor (AA 579 - 944) site 5727 5803 putative VECTOR sequence pUC18 BASE COUNT 1642 a 1301 c 1359 g 1501 t ORIGIN 1 catttgtacg attgccaaag tgccttcgat tcttagggct acaattagag gcagatgggt 61 cgtcagtttc tactccgtcc aacggtgggt gcagttctgg ttggtgcaca cgtagtacag 121 tcgcatctcc tcttcggcgc gacgggtttg cgccttgaag aagaccgcct cccgatggga 181 acacttggga caagcgtggt cttcggtgcg cggcagcgtg ggatcggaaa tcacgtcggg 241 cacaatgtgg gtcagctcgt cgatctcgtg cataatcttg ttcacgtaga tgcagttgga 301 gttcgtcttc tgtttgtaat cgcaattccg gcaggcgtac agcaggatct tgttctcctt 361 gtcctccttg gggtacagca tgttgttgca ctcctggcag aaccgaatgc ccacgaatcc 421 cggcccctca gtgtgtgcgg catcaaaggc agtcgtcatg gctattggct tacaattatt 481 gctagttaat tgcaatttgt gagttaatgc ggcttttatt taccttttta tcgttgcaat 541 tggcgaaagt gtgaccgtga caaggcggct taaatatacc gagatcatgg aataggtata 601 cctcattaac atactagcct ttaacccttg tgagcactgc tattttaatt atatgcttat 661 atattttgtt ttttatttta tcaaaatgca tattaaagaa tgcatttatt tgtattttat 721 tcaattactt tttgcacaaa atgttaaacc tgataattat cttaccgagc aacggctgcg 781 gtggccttcg actgaaatta tatataaata gtgaaatgtt ccatataagc tttattgttc 841 ggatcattaa tctatgctta caaagttaac caataaaaag ttaatataat attaagccag 901 acaccggcta tttattttaa atttatgttg gaattattac aaatttacaa cccagaagat 961 tcaaaacaga ggaaatttct ttgtactttt catggcggca tgttcagatt attttttcac 1021 gggttgttgt aattaatggt atttttcaac ctacatgcaa cggtcacact gaattttcat 1081 acacaaacgc ttgtcgtgtt ggaatttaaa gcataaaatt aggtaaattg tgattcatta 1141 tcggaaatgc ggtcaaaacc cttcaaggaa cgcatcccgt gatatgagga catgtttgtg 1201 aagcaaatac cttagccagt gacttgataa tttcacgctc ttcatcggcg atggcagtca 1261 ctttctttcg cgcgaagcag aaaagtgcac ttctaatcag caaaataagt ggttaaaacc 1321 aatcctccac gtccttcacc ggcacaaaat cacatcaaat atttgaaaag tatgctacgg 1381 atttgcgagt gtattagaat tatttgctac ccctttgaaa tacaatttta tttcagaaga 1441 aaacttgttg cgttttctgt gcgtcaggcg caggtagtgt tgtctcgctc acaccaaggc 1501 cgatcgatcg taaagatcga acagcgcgac gccatttttt cttagcagct tttgggcgtg 1561 tgttggtgac gctggcaaaa tgtgatgttt agtaaatcac gtgcctgaaa gtagactaaa 1621 gcggtcactg gttatcctga tcctgaatta tcatccaatc gatcttaatt gcaggctggt 1681 atcaccaaca tgagtgcctc caaggagggc aaggaaaaga agggcaagct gctgggtgtg 1741 gaaaacattt cgccgcctaa ggacaaacgt cccgccacca agatgaagct cttgaatgac 1801 gtgggagctg gtgaggattc ggaggcaagc actactacta ccacatcaag aactccctcc 1861 aacaagcagg gaaagcgtga cagtgtcgct gaatcgcgca tcaaaatact caatgaagaa 1921 atactgggca ctccgaaaac tgagaaacgg ggcgccacaa agagcacagc tccggctgct 1981 tccactgtga agattctgaa cgagaaaaag acacccagtg ctaccgtgac agccgtggaa 2041 actaccaaga tcaagacgtc tcccagtaaa agaaagaaaa tggagcacta tgtacttcag 2101 gctgtgaaat cagaaaatac caaggcggac accacggtta ccgtggtcac cgaagaagat 2161 gacaccattg atttcattct agcggatgat gaggaagtag ttccgggcag aatagaaaat 2221 aacaacggcc aggagatcgt tgtcaccgag gacgatgagg atctagggga ggatggtgat 2281 gaggacggtg aagactcctc aggcaagggc aactctagcc agacaaagat caaggagatc 2341 gtggagcatg tgtgtggcaa atgctacaag accttccgtc gcgttcagag tctgaaaaag 2401 catctagagt tctgtcgcta tgacagtggg tatcgtttgc gcaaagccga catgcttaag 2461 aacctggaga agatcgagaa ggatgccgtg gtgatggaga agaaggacat atgcttctgc 2521 tgcagcgaaa gttacgacac cttccatgta agtcataaag attgaaacca agaggaatta 2581 gcataactta cgcataccac attttccttt cagttgggtc acattaactg tcccgactgc 2641 cccaagtcgt ttaagacaca gaccagttac gaacgccaca ttttcatcac tcactccgag 2701 ttcagcgatt ttccttgctc catttgcaat gccaacttgc gcagcgaggc cttgttggcg 2761 ctccacgagg aacagcacaa gtcacgtggc aagtcgtatg catgcaagat ctgcggcaag 2821 gacttcaccc gctcgtacca cttgaagcgc caccagaagt actcatcgtg ctcatcaaac 2881 gagaccgata ccatgagctg caaggtgtgc gatcgcgtct tctatcgcct tgacaacctg 2941 cgatcgcatt tgaagcagca tttgggcaca caggtggtta aaaagccgga gtacatgtgc 3001 cacacgtgca agaattgttt ctacagcctg tccacgctca agtacgttct ctaaaagatt 3061 ttaaacgata taaagtaatg ttcggtatat tttcgcagca ttcacatacg cactcatacg 3121 ggggagaaac catttgactg cgatctttgc gacaagaagt tttctgcatt ggtggccctt 3181 aaaaagcatc gacgctatca cactggcgag aaaccataca gttgcactgt ggttagtctt 3241 aaaacttccg taacttttca tttaacctat tgtaacaatg cggtattcta ttacctttag 3301 tgcaaccaag catttgccgt aaaggaagtg ctcaatcgtc acatgaaacg gcacactgga 3361 gagcgtccgc acaagtgtga tgaatgtggc aagagtttta tccgggccac ccagctgcgc 3421 acccattcca aaacccatat tcgccccttt ccctgtgagc aatgcgacga aaaattcaaa 3481 acagagaaac agtaagatat taaaaaacct tttatctttt ctgttagccc tacttactta 3541 ttgcaatttt gtttcgcaga cttgagcgcc atgtgaagac ccattctcgc acaaaacgcc 3601 ccgtcttttc ctgcgccgag tgcaagcgta atttccgcac tccagcattg ctcaaggagc 3661 atatggacga gggaaaacac agccgtaagt tggaatcgac aattggcaat aatcaaggct 3721 ttaatcccgc tcctaccctt tgtagcgaaa caacaacggt catcaatgcg atcggccgtc 3781 aaaattatgg aacgcacgga ttgcgccatt tgcgataaga actttgacag cagcgatacc 3841 ctgcgacggc acatacgcac cgttcacgaa tgcgatccgg atgacatttt tggcgttgag 3901 ccgcatccat caaagcgtgc aaagaaggac atcgaatcgg aggaggttgt accagtggcg 3961 ttaaacacat cagcgggctc gttaatttcc agccaaacgg acggcaatga cgttgtggtg 4021 cgtgaattcc tcgtggacga aggcgatggc gcggcccaga ccattacact agaaaacgaa 4081 acatacacaa ttctgcccct ggacggggcc atcgagggag agcagctgac ggatgaggct 4141 ggcgttaagc ccgaggcgaa gaaggaggag gcgcaggtct cgccggtggt aaagaaagag 4201 cagcgtaaat ccctggccgc cagtctggcc gctgccatcg cagataattt ggaagaatca 4261 tgtagcgagg atgacttcag tggcgaaatt ctaactgagg aggacataaa gctcaaagag 4321 aatgtgggta aacttattga tatgctagtg gatccaccga tcctaaagaa atacggctgg 4381 cccaatgccc ccgaggagac ggtgctctgc aaagtgatcg agaactgtgg ccacgacctg 4441 actaaaggtg gcgaaaacta cgctgagctt gactacggta gccgcatgcg agagtactgc 4501 aaactgctct ttaccgtggt cattcacaac gattccatca agtcgctgct caataatttc 4561 cccatcgacg atgtgatcga atatgtactg ggagatgagg atcaggacga aggtggattg 4621 gacaaagaca atgaagacaa tgagtcacat tcaggtgatg aagaagcggt gtcggtcaca 4681 ggcgaaacta aaaaaaatga aatcaaagag aaaccggaaa agaaggaagt ttcggcgaaa 4741 tctgaaaaga aggagatcgt ggggaaagct gtggataagg ataacacaga ggaggtggtc 4801 cgggaaaata agaaaaaacc tgtaggcgaa caagagaaag cttgattttc cagcccttca 4861 tgcatgcgta caattaccgc accaaaaacc atattctagg aattgatcgt tgatgatttt 4921 tacaacattt gtatttttaa gatcgttggt tttggtacaa acaccaagtg accttaaaag 4981 agaaacttat cgtctgttgc ttgaatattc agacatcttg cgcattgaca aatcacccaa 5041 aaactaagaa accaacatat tacatatcaa agatattttg atattattat atagatttta 5101 tatatttttg aattgaatga tgttaccaag caatatatgc atggctattt ttatagtact 5161 cttattaatt ataaaatata caaattcaat attttcgata aaactctctc aatttttaac 5221 aatgcttatt aatcctcaat gcttactgtt ccatcatcaa cttcagaata cgtgcgttgt 5281 tttgcaagat cttgtggcga ctctcgtcga ttagctcccg gtactccgca atgctggctt 5341 ggatttgctg caactgatgc tgcaggggct ccgtggcaga tgccgtgaga gtctgctccc 5401 tttttagttc cgtggatgcc tgcgtgtagg tgtcgcgcca catcgtaagc tccagctgca 5461 ttgcatcaaa atcctcgggt atgcagtcca gtagtttacc cagcggacct atcgacttgg 5521 tgagcttttg gactacgtcg cgtacgtcgt tcacttggcg ggcagaagtt tgtcggcctg 5581 cctgtgctgg aggcggttcc acttcggcgc cttggttgac cagttccttt tgcgtttcca 5641 agatctgctg caccaatcgt ccttgggcat cgagctgtcc ttccaatgcc ggttcgtcac 5701 cgccaccttc gacaatatca tgggcggcgg aatcttctat gatcacaggt tctctccgtc 5761 gtcgtccaag tcgccaaagg tttcaagctt gcatgcctgc agg //