GenBank-Updates@genbank.bio.net (09/23/90)
LOCUS DROSUHW 5803 bp ds-DNA INV 23-SEP-1990
DEFINITION Drosophila melanogaster su(Hw) gene for suppressor of hairy wing.
ACCESSION Y00228
KEYWORDS DNA-binding protein; finger protein; metal binding protein;
su(Hw) gene; suppressor protein; zinc finger protein.
SOURCE fruit fly (Drosophila melanogaster).
ORGANISM Drosophila melanogaster
Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
Cyclorrhapha; Schizophora; Drosophiloidea; Drosophilidae.
REFERENCE 1 (bases 1 to 5803)
AUTHORS Corces,V.
TITLE ;
JOURNAL Unpublished (1988) see COMMENT for author address
STANDARD simple automatic
REFERENCE 2 (bases 1079 to 5200)
AUTHORS Parkhurst,S.M., Harrison,D.A., Remington,M.P., Spana,C.,
Kelley,R.L., Coyne,R.S. and Corces,V.G.
TITLE The Drosophila su(Hw) gene, which controls the phenotypic effect of
the gypsy transposable element, encodes a putative DNA binding
protein
JOURNAL Genes Dev. (1988) In press
STANDARD simple automatic
COMMENT *source: strain=Canton S; **map: genomic location=88B,C;
EMBL features not translated to GenBank features:
key from to description
TRANSCR 1079 5199 primary transcript
MSG 1079 1122 Exon 1
IVS 1123 1674 Intron I
MSG 1675 2547 Exon 2
SITE 2152 2295 acidic domain
SITE 2347 2415 zinc finger domain 1
IVS 2548 2613 Intron II
MSG 2614 3041 Exon 3
SITE 2623 2694 zinc finger domain 2
SITE 2710 2778 zinc finger domain 3
SITE 2797 2871 zinc finger domain 4
SITE 2893 2961 zinc finger domain 5
SITE 2992 3041 zinc finger domain 6, part 1
IVS 3042 3098 Intron III
MSG 3099 3231 Exon 4
SITE 3099 3117 zinc finger domain 6, part 2
SITE 3133 3201 zinc finger domain 7
SITE 3217 3231 zinc finger domain 8, part 1
IVS 3232 3300 Intron IV
MSG 3301 3491 Exon 5
SITE 3301 3354 zinc finger domain 8, part 2
SITE 3370 3438 zinc finger domain 9
SITE 3448 3491 zinc finger domain 10, part 1
IVS 3492 3559 Intron V
MSG 3560 3684 Exon 6
SITE 3560 3584 zinc finger domain 10, part 2
SITE 3607 3680 zinc finger domain 11
IVS 3685 3744 Intron VI
MSG 3746 5199 Exon 7
SITE 3796 3867 zinc finger domain 12
POLYA 5199 5199 polyA site
[1 ] Author address Corces V., The John Hopkins University,
Biology Dept.,, 34th Charles Sts.,, Baltimore, Md 21218.
Submitted (12-SEP-1988) on tape to the EMBL data library.
FEATURES from to/span description
pept 1690 2547 Hw suppressor (AA 1 - 286)
2614 3041 Hw suppressor (AA 287 - 429)
3099 3231 Hw suppressor (AA 430 - 473)
3301 3491 Hw suppressor (AA 474 - 537)
3560 3684 Hw suppressor (AA 538 - 578)
3746 4845 Hw suppressor (AA 579 - 944)
site 5727 5803 putative VECTOR sequence pUC18
BASE COUNT 1642 a 1301 c 1359 g 1501 t
ORIGIN
1 catttgtacg attgccaaag tgccttcgat tcttagggct acaattagag gcagatgggt
61 cgtcagtttc tactccgtcc aacggtgggt gcagttctgg ttggtgcaca cgtagtacag
121 tcgcatctcc tcttcggcgc gacgggtttg cgccttgaag aagaccgcct cccgatggga
181 acacttggga caagcgtggt cttcggtgcg cggcagcgtg ggatcggaaa tcacgtcggg
241 cacaatgtgg gtcagctcgt cgatctcgtg cataatcttg ttcacgtaga tgcagttgga
301 gttcgtcttc tgtttgtaat cgcaattccg gcaggcgtac agcaggatct tgttctcctt
361 gtcctccttg gggtacagca tgttgttgca ctcctggcag aaccgaatgc ccacgaatcc
421 cggcccctca gtgtgtgcgg catcaaaggc agtcgtcatg gctattggct tacaattatt
481 gctagttaat tgcaatttgt gagttaatgc ggcttttatt taccttttta tcgttgcaat
541 tggcgaaagt gtgaccgtga caaggcggct taaatatacc gagatcatgg aataggtata
601 cctcattaac atactagcct ttaacccttg tgagcactgc tattttaatt atatgcttat
661 atattttgtt ttttatttta tcaaaatgca tattaaagaa tgcatttatt tgtattttat
721 tcaattactt tttgcacaaa atgttaaacc tgataattat cttaccgagc aacggctgcg
781 gtggccttcg actgaaatta tatataaata gtgaaatgtt ccatataagc tttattgttc
841 ggatcattaa tctatgctta caaagttaac caataaaaag ttaatataat attaagccag
901 acaccggcta tttattttaa atttatgttg gaattattac aaatttacaa cccagaagat
961 tcaaaacaga ggaaatttct ttgtactttt catggcggca tgttcagatt attttttcac
1021 gggttgttgt aattaatggt atttttcaac ctacatgcaa cggtcacact gaattttcat
1081 acacaaacgc ttgtcgtgtt ggaatttaaa gcataaaatt aggtaaattg tgattcatta
1141 tcggaaatgc ggtcaaaacc cttcaaggaa cgcatcccgt gatatgagga catgtttgtg
1201 aagcaaatac cttagccagt gacttgataa tttcacgctc ttcatcggcg atggcagtca
1261 ctttctttcg cgcgaagcag aaaagtgcac ttctaatcag caaaataagt ggttaaaacc
1321 aatcctccac gtccttcacc ggcacaaaat cacatcaaat atttgaaaag tatgctacgg
1381 atttgcgagt gtattagaat tatttgctac ccctttgaaa tacaatttta tttcagaaga
1441 aaacttgttg cgttttctgt gcgtcaggcg caggtagtgt tgtctcgctc acaccaaggc
1501 cgatcgatcg taaagatcga acagcgcgac gccatttttt cttagcagct tttgggcgtg
1561 tgttggtgac gctggcaaaa tgtgatgttt agtaaatcac gtgcctgaaa gtagactaaa
1621 gcggtcactg gttatcctga tcctgaatta tcatccaatc gatcttaatt gcaggctggt
1681 atcaccaaca tgagtgcctc caaggagggc aaggaaaaga agggcaagct gctgggtgtg
1741 gaaaacattt cgccgcctaa ggacaaacgt cccgccacca agatgaagct cttgaatgac
1801 gtgggagctg gtgaggattc ggaggcaagc actactacta ccacatcaag aactccctcc
1861 aacaagcagg gaaagcgtga cagtgtcgct gaatcgcgca tcaaaatact caatgaagaa
1921 atactgggca ctccgaaaac tgagaaacgg ggcgccacaa agagcacagc tccggctgct
1981 tccactgtga agattctgaa cgagaaaaag acacccagtg ctaccgtgac agccgtggaa
2041 actaccaaga tcaagacgtc tcccagtaaa agaaagaaaa tggagcacta tgtacttcag
2101 gctgtgaaat cagaaaatac caaggcggac accacggtta ccgtggtcac cgaagaagat
2161 gacaccattg atttcattct agcggatgat gaggaagtag ttccgggcag aatagaaaat
2221 aacaacggcc aggagatcgt tgtcaccgag gacgatgagg atctagggga ggatggtgat
2281 gaggacggtg aagactcctc aggcaagggc aactctagcc agacaaagat caaggagatc
2341 gtggagcatg tgtgtggcaa atgctacaag accttccgtc gcgttcagag tctgaaaaag
2401 catctagagt tctgtcgcta tgacagtggg tatcgtttgc gcaaagccga catgcttaag
2461 aacctggaga agatcgagaa ggatgccgtg gtgatggaga agaaggacat atgcttctgc
2521 tgcagcgaaa gttacgacac cttccatgta agtcataaag attgaaacca agaggaatta
2581 gcataactta cgcataccac attttccttt cagttgggtc acattaactg tcccgactgc
2641 cccaagtcgt ttaagacaca gaccagttac gaacgccaca ttttcatcac tcactccgag
2701 ttcagcgatt ttccttgctc catttgcaat gccaacttgc gcagcgaggc cttgttggcg
2761 ctccacgagg aacagcacaa gtcacgtggc aagtcgtatg catgcaagat ctgcggcaag
2821 gacttcaccc gctcgtacca cttgaagcgc caccagaagt actcatcgtg ctcatcaaac
2881 gagaccgata ccatgagctg caaggtgtgc gatcgcgtct tctatcgcct tgacaacctg
2941 cgatcgcatt tgaagcagca tttgggcaca caggtggtta aaaagccgga gtacatgtgc
3001 cacacgtgca agaattgttt ctacagcctg tccacgctca agtacgttct ctaaaagatt
3061 ttaaacgata taaagtaatg ttcggtatat tttcgcagca ttcacatacg cactcatacg
3121 ggggagaaac catttgactg cgatctttgc gacaagaagt tttctgcatt ggtggccctt
3181 aaaaagcatc gacgctatca cactggcgag aaaccataca gttgcactgt ggttagtctt
3241 aaaacttccg taacttttca tttaacctat tgtaacaatg cggtattcta ttacctttag
3301 tgcaaccaag catttgccgt aaaggaagtg ctcaatcgtc acatgaaacg gcacactgga
3361 gagcgtccgc acaagtgtga tgaatgtggc aagagtttta tccgggccac ccagctgcgc
3421 acccattcca aaacccatat tcgccccttt ccctgtgagc aatgcgacga aaaattcaaa
3481 acagagaaac agtaagatat taaaaaacct tttatctttt ctgttagccc tacttactta
3541 ttgcaatttt gtttcgcaga cttgagcgcc atgtgaagac ccattctcgc acaaaacgcc
3601 ccgtcttttc ctgcgccgag tgcaagcgta atttccgcac tccagcattg ctcaaggagc
3661 atatggacga gggaaaacac agccgtaagt tggaatcgac aattggcaat aatcaaggct
3721 ttaatcccgc tcctaccctt tgtagcgaaa caacaacggt catcaatgcg atcggccgtc
3781 aaaattatgg aacgcacgga ttgcgccatt tgcgataaga actttgacag cagcgatacc
3841 ctgcgacggc acatacgcac cgttcacgaa tgcgatccgg atgacatttt tggcgttgag
3901 ccgcatccat caaagcgtgc aaagaaggac atcgaatcgg aggaggttgt accagtggcg
3961 ttaaacacat cagcgggctc gttaatttcc agccaaacgg acggcaatga cgttgtggtg
4021 cgtgaattcc tcgtggacga aggcgatggc gcggcccaga ccattacact agaaaacgaa
4081 acatacacaa ttctgcccct ggacggggcc atcgagggag agcagctgac ggatgaggct
4141 ggcgttaagc ccgaggcgaa gaaggaggag gcgcaggtct cgccggtggt aaagaaagag
4201 cagcgtaaat ccctggccgc cagtctggcc gctgccatcg cagataattt ggaagaatca
4261 tgtagcgagg atgacttcag tggcgaaatt ctaactgagg aggacataaa gctcaaagag
4321 aatgtgggta aacttattga tatgctagtg gatccaccga tcctaaagaa atacggctgg
4381 cccaatgccc ccgaggagac ggtgctctgc aaagtgatcg agaactgtgg ccacgacctg
4441 actaaaggtg gcgaaaacta cgctgagctt gactacggta gccgcatgcg agagtactgc
4501 aaactgctct ttaccgtggt cattcacaac gattccatca agtcgctgct caataatttc
4561 cccatcgacg atgtgatcga atatgtactg ggagatgagg atcaggacga aggtggattg
4621 gacaaagaca atgaagacaa tgagtcacat tcaggtgatg aagaagcggt gtcggtcaca
4681 ggcgaaacta aaaaaaatga aatcaaagag aaaccggaaa agaaggaagt ttcggcgaaa
4741 tctgaaaaga aggagatcgt ggggaaagct gtggataagg ataacacaga ggaggtggtc
4801 cgggaaaata agaaaaaacc tgtaggcgaa caagagaaag cttgattttc cagcccttca
4861 tgcatgcgta caattaccgc accaaaaacc atattctagg aattgatcgt tgatgatttt
4921 tacaacattt gtatttttaa gatcgttggt tttggtacaa acaccaagtg accttaaaag
4981 agaaacttat cgtctgttgc ttgaatattc agacatcttg cgcattgaca aatcacccaa
5041 aaactaagaa accaacatat tacatatcaa agatattttg atattattat atagatttta
5101 tatatttttg aattgaatga tgttaccaag caatatatgc atggctattt ttatagtact
5161 cttattaatt ataaaatata caaattcaat attttcgata aaactctctc aatttttaac
5221 aatgcttatt aatcctcaat gcttactgtt ccatcatcaa cttcagaata cgtgcgttgt
5281 tttgcaagat cttgtggcga ctctcgtcga ttagctcccg gtactccgca atgctggctt
5341 ggatttgctg caactgatgc tgcaggggct ccgtggcaga tgccgtgaga gtctgctccc
5401 tttttagttc cgtggatgcc tgcgtgtagg tgtcgcgcca catcgtaagc tccagctgca
5461 ttgcatcaaa atcctcgggt atgcagtcca gtagtttacc cagcggacct atcgacttgg
5521 tgagcttttg gactacgtcg cgtacgtcgt tcacttggcg ggcagaagtt tgtcggcctg
5581 cctgtgctgg aggcggttcc acttcggcgc cttggttgac cagttccttt tgcgtttcca
5641 agatctgctg caccaatcgt ccttgggcat cgagctgtcc ttccaatgcc ggttcgtcac
5701 cgccaccttc gacaatatca tgggcggcgg aatcttctat gatcacaggt tctctccgtc
5761 gtcgtccaag tcgccaaagg tttcaagctt gcatgcctgc agg
//