GenBank-Updates@genbank.bio.net (10/26/90)
LOCUS BOVCASBE 10338 bp ds-DNA MAM 26-OCT-1990 DEFINITION Bovine beta-casein gene, complete cds. ACCESSION M55158 KEYWORDS beta-casein. SOURCE Bovine DNA. ORGANISM Bos taurus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Artiodactyla; Ruminantia; Pecora; Bovidae. REFERENCE 1 (bases 1 to 10338) AUTHORS Bonsing,J., Ring,J.M., Stewart,A. and Francis Mackinlay,A.G. TITLE Complete nucleotide sequence of the bovine beta-casein gene JOURNAL Aust. J. Biol. Sci. 41, 527-537 (1988) STANDARD simple staff_entry FEATURES from to/span description pept 3714 3764 beta-casein, exon 2 (first expressed exon) 4489 4515 beta-casein, exon 3 4628 4654 beta-casein, exon 4 6550 6573 beta-casein, exon 5 6666 6707 beta-casein, exon 6 8028 8525 beta-casein, exon 7 9127 9132 beta-casein, exon 8 pre-msg 1723 10220 beta-casein mRNA end introns IVS 1767 3701 beta-casein intron 1 IVS 3765 4488 beta-casein intron 2 IVS 4516 4627 beta-casein intron 3 IVS 4655 6549 beta-casein intron 4 IVS 6574 6665 beta-casein intron 5 IVS 6708 8027 beta-casein intron 6 IVS 8526 9126 beta-casein intron 7 IVS 9169 9898 beta-casein intron 8 BASE COUNT 3380 a 1788 c 1740 g 3430 t ORIGIN 1 tcgaatccat ctctatcaat taatgtaatt caaaattggt gagagacagt cattaggaaa 61 ttctctgttt attgcacaat atgtaaagca tcttcctgag aaaagggaaa tgttgaatgg 121 gaaggacatg ctttcttttg tattcctttt ctcagaaatc acactttttt gcctgtggcc 181 ttggcaacca aaagctaaca cataaagaaa ggcatatgaa gtagccaagg ccttttctag 241 ttatatctat gacactgagt tcatttcatc atttattttc ctgacttcct cctgggccat 301 atgagcagtc ttagaatgaa tattagctga ataatccaaa tgcatagtag atgttgattt 361 gggttttcta agcaatacaa gacttctatg acagtgagat gtattaccat ccaacacaca 421 tctcagcatg atataaatgt aaggtatatt gtgaagaaaa attatcaatt atgtcaaagt 481 gcttacttta gaagatcatc tatctgtccc aaagctgtga atatatatat tgaacataat 541 taatagacga aacaaacctt gtaaaaatga gtagtgtaaa atacaactac atttatgaac 601 atctatcact aaagaggcaa agaaagttga ggactgcttt tgtaaatggg ctcttattaa 661 tgaaaagtac ttttgaggtc tggcttagac tctattgtag tacttatggt aagaccctcc 721 tcttgtctgg gctttcattt tctttcttcc ttccctcatt tgcccttcca tgaatactag 781 ctgataaaca ttgactcact ataaaagata tgaggccaaa cttgagctgt ccattttaat 841 aaatctgtat aaataatatt tgttctacag aagtatctct aaataaatgt actttctctc 901 ttaaaatccc tcaacaaatc cccactatct agagaataag attgacattc cctggagtca 961 cagcatgctt tgtctgccat tatctgaccc ctttctcttt ctctcttctc acctccatct 1021 actccttttt ccttgcaata catgacccag attcactgtt tgatttggct tgcatgtgtg 1081 tgtgctgagt tgtgtctcac tcttgtcaac cccatgaatg acagtccacc aggctccact 1141 atttccagtt aagaatactg gagtggattg tgtttcctac ttcatttgat taatttagtg 1201 actttttaaa tttttttcca tattcaggag gctattcttt ccttttagtc tatactgtct 1261 tcgctcttca ggtctaagct atcatcatgt gcttgttagc ttgtttcttt ctccattata 1321 gcataaacac taacaactat tcaggttagc atgagattgt gttctttgtg tggcctgtgt 1381 atttctggtg tgtattagaa tttaccccaa gatctcaaag acccaccgaa tactaaagag 1441 acctcattgt agttacaata atttggggac tgggccaaaa cttccgtgtg tcccagccaa 1501 ggtctgtagc tactggacaa tttaatttcc tttatcagat tgtgaattat tccctttaaa 1561 atgctcccca gaatttttgg ggacagaaaa ataggaagaa ttcattttct aatcatgcag 1621 atttctagga attcaaatcc actattggtt ttatttcaaa ccacaaaatt agcatgccat 1681 taaatactat atataaacaa ccacaaaatc agatcattat ccattcagct cctccttcac 1741 ttcttgtcct ctactttgga aaaaaggtaa gaatctcaga tataatttca ttgtatctgc 1801 tactcatctt tatttcagac taggttaaaa tgtagaaaga acataattgc ttaaaataga 1861 tcttaaaaat aaggatgttt aagataaagt ttacagtatt ttcagcaaat ttgttaaaaa 1921 atagaagcaa ctataaagat ttgtaacagt ggttgctatt ttctttacca cgagactagt 1981 taacaggctg tattaaaaga tcttttcttg aattaaatat tttcaatttg attaaacata 2041 cctcagccat aaaggcaagc acatttaatt tatactatgg gaatttgaat aattgttact 2101 gaagaagctc taccaacaaa aagtttatag agctagcata tttagtcaag agataaagag 2161 ggttgttagg atacatgtgc tatttgaaag gtatttataa aagaagagta tatttattaa 2221 aattgctcag aacatccaaa tttcaagttt atcatttatc ttacaatatt tcaaaaatat 2281 taaaatagat acatgaaata cagaagtaaa ttaaagagaa agtattttat tttgtaaaaa 2341 aaaattctag gttggacagg gagtaccagg aaacaaaaaa caatgaaaaa tgtgatctga 2401 cagaaattat agctcaaagt atagtagtca gtaatgaaat ggcttaaaaa ttggcatata 2461 aaatgctaat tataaaataa acaaaatgta ataataccct ccctacatgt aatgaactct 2521 gagtattata ctcttttttg aagtcttgac aatgaaaatt tatttagact tttatagaca 2581 tcttggataa agtaaaacaa attacgaatt agcatccatg agaaaaatat agaaaaattt 2641 cttaatgtag tttgcaaatc tggggattga agatgtgtgt caagagattg tgatggcaga 2701 catttttttt cagactataa aatgcacaaa caaccattta atacattttg gtcaaaaata 2761 gtatgtattt tattttatgc tacaggagag tagtctaaag taggactggg cagagatctg 2821 acaccctggt aatcaccgag agatagtaca cagtctctgt agagaaaata agcatagtgt 2881 atgatctcta aaattatgtg gacaaagggg agataacatt aggcatgtgg ggatgaagac 2941 tgagtacaga agaacaatct agtcagtcca agaaaacatg tggatcaatg gaacaaatag 3001 aagaaatgct aaaatgaaac agaagtctta ctggaaataa aagatatgag gaagacaaac 3061 attcatgaaa atcacttagt ttagtagaga aaagataaaa ataaagtatt accttcttct 3121 tcatatacat tgtttgatca gatgcccctc aataaaactg agtctccaac agaactgaaa 3181 ctttaatatt ttgttcactg ctctaatccc agaatctaag acatatctgg caataaaaat 3241 taataaataa atatttttaa taagtaaatc aatcacttaa tttttctgta agtatctgta 3301 acttctcttc tgtctttcca aaaaacactc ataagtactg tgaataagat gaaaagagtg 3361 aaataagata taggctgtta gctgaaaaca tctggatggc tggcagtgaa acattaactt 3421 gaaatgtaag attaatgagt aatagtaaat tttaaccttg gccgtatgat aaaatgtcta 3481 ttaatatttt tctaaaatac agggcttttt gtttttgcca tgaggtttgc aggatcttgg 3541 ttccctgatg agggatcaaa cctgggctcc cctggaagca cggagtctta gatatttgta 3601 ttatacacta tctttggttt cttttaaagg gaagtaattc tacttaaata agaaaataga 3661 ttgacaagta atacactatt tcctcatctt cccattccca ggaattgaga gccatgaagg 3721 tcctcatcct tgcctgcctg gtggctctgg cccttgcaag agaggtaaat acagaaaaaa 3781 tgttgaaata aataagacta gtactatctg ctatgtgtag aaaattcatt accaacattg 3841 taaatgtata aataatgcac aatctcagat tttttttgaa tgctaagaaa gtcatttacg 3901 ttcatccact atctcagtag tatcctatgg gaccacaagt ctgagtctag tgctttctat 3961 agtattgtac catctgtacc atcaatccct aaagaaaaaa gaaaataaac caataagcaa 4021 cagactaaca agaaggaaca cagataagaa caaaaagtga gtaatattgc ataaatacaa 4081 ttgcatgcat atacaatcta gataaatata tcttattcca gtgatgaaat atttgtatcc 4141 cttactgtag agtgctaggt ttagctgtgt ctattcaaca caggatgata ctccagagga 4201 tggtatatca gacaacaata ataaatatgt tcataattat aataaaaagt gttcagtaaa 4261 aattaaaata actccttttc tgttacccat aaaaactctt cattaaagta aaacaaaaat 4321 atactaatga aagttactaa atttaaaaga ctctcaaaag acatataaca tttttatttt 4381 tcagatttgt gaaatagata gctctgaata aagcaagtaa aaattaggta ggaaaatatt 4441 taataatgag ttgactgtgg gaactaaagt gttttttttt ctctttagct ggaagaactc 4501 aatgtacctg gtgaggtaag atatttttat acaaagaaaa aaattaattt aactgtaaaa 4561 tagtaacagt ctctaatgat ctggcagaag actcagctaa ttgtcaattt ttatttttcc 4621 tttatagatt gtggaaagcc tttcaagcag tgaggtaaga tagtgttcat tcagaggcaa 4681 tttcccaaat ttagagcaat aaaatgctgt attatctttt tgtgttacat taatggcaac 4741 ccactccagt attcttgcct ggaaaatccc atagaggagg agcctggtag gctgcagtcc 4801 acggggtcgc taagagtcgg acaggactga gcgacttccc tttcactttt cactttcatg 4861 ccttggagaa ggaaatggca acccactcca gttttcttgc cgggagaatc ccagggacgg 4921 gggagcctgg tgggctgccg tctatggggg tcgcacagag ttggacacga ctgaagcgac 4981 ttagcagtag cagcagcagg acagttaagg tttctctaat agctcagttg gtaaagaatc 5041 tgcctgcagt gcaggaggac cctgggttcg attcctcaag atctgcagga gaagggatag 5101 gctacccatt ccagtgttct ttaagccaat gtggctatgt actgacgggt aactattgtc 5161 aatttccact ctgtatattt aaaggaataa atgtgtagaa ggtttaatat tctagtaatt 5221 tctaaatggg tttgttattt gaaattgtgt cattgtgccc tgcttttttt ccttaatgaa 5281 ctgtacagtc ctcttttctg tcttgaactt tctatgttaa cctccttcca tgctttggca 5341 tttattgagc actttctgtt tcagactttg actaggaact gcagtacaaa ctagaaagag 5401 ggatgccctt tgtaaagtgt gagcagacat gcaaatggac atattttatt attatacaag 5461 caatccagta cacaagaggc agtgagaatg agtgtagtcc taaatctgcc tggtggaatg 5521 aggtagataa taaccctatg ccactctttt tggctctgtc atcagctgtt ggttaaatag 5581 tgcatcaata tactttgtct cttcacaaag gtcaaaagat gctgctgctg ctgctaagtc 5641 gcttcagtca tgtccgactc tgtgcgacct catagatggc agcctgccag gctcccccat 5701 ccctgggatt ctccaggcaa gaatactgga gtgggttgcc atttcctatt ccaatgcata 5761 aaagtgaaaa gtgaaagtga agtcgctcag tcgtgtccga ctcctagtga ccccgtggac 5821 tgcagcctac caggctcctc catccatggg attttccagg caagagtact ggagtgggtt 5881 gccattgcca tctccaaaga tccttatagg agggtatgta tttcttataa ttcattagaa 5941 gcctaaacat aaccagggaa ctaagaatga ttaacaagtt catgcgtggt tattattata 6001 tattttcaat gactattatt cttttagaac cagatgaaaa tattagagat catttgttgt 6061 cctaaggaga gaacaggatg attgagagac atgtatgcat gcaaagttac ttcagccctt 6121 tccaactctg tatgacccta tggactgtaa cctgccaggt tcctctgtct atgggattct 6181 ccaggcaaga atacaggagt gggttgtcat ctcctccagg gcctaggaat tgacctgcat 6241 ctcttacgtc tcctgcattg gcaggcaggt tctttaccac tagcaccacc tggaagcccg 6301 attagtatct gttaaatgcc tctttgagta ctatgctctc taatcctctt tttcttgatt 6361 gcatcatctt tctttttata caacagcctt attcagaaga gtggaacata aactttcagc 6421 cataaaataa tgatattatc aaatgagctg tccatattaa tctattaaat ttcttcattt 6481 tctgatttat gttgacaaat aagaattttt tttaaagcta gacctgattt tatttttatt 6541 tttccaaagg aatctattac acgcatcaat aaggtaaaac ccctcatatt taaatgtaca 6601 tttttttaaa tttcatgttt gatttttata aacagcattt ctttatgtat ttttttttta 6661 accagaaaat tgagaagttt cagagtgagg aacagcagca aacagaggta atttgttcac 6721 tatgagtata ttttgagaag tattatgaaa cataacacat aaaaagattt ataataatta 6781 tgttcagtct aagaatggta atataaatgt cagtgcaaga aataaaaact ttgacaaaat 6841 gaaaatattt taaaaatata aacgcatttt aaaacacata atcaaatttc acagtataga 6901 ataaatagct aagaataatt attgatgtat tcattttact aatggtatac ctggttttaa 6961 taactgcata ttagtaggaa catttccaga ctagggactg tgatcccctt attctaatga 7021 tggatatgct gatgaaagac agtagggtga cagtgtggca ctaatcctca tctgatcatt 7081 tatcagctgt ataaccttgg ctccatgttt ctctgtacat cattttcttc acctgtaaat 7141 tgagaatatt cataattacc cagagttgat gaactgacac acaatgaata ttcagtggtt 7201 ttatattata tttgatagct tttatactca catttatgga tgtgtggagt tctaaaaagt 7261 atttccattg cccagatgag agaagtgagg tacaggacaa ttgagtatgc aaatgtgtga 7321 ccataccaca tagttattaa atagcagaac ttgcttaaaa acaaggattt gcggacaatg 7381 taaaattctt tcattatatt actcttgtgg taacatattt atctaattat gatatttaag 7441 ctttcctctt ttataattga agtttgattg tttggcactt aggccaaatt ctaaatcaaa 7501 atgaatttac aacttgatgc ctttgaagac tcaagattac caccttctac caagagaagt 7561 agtgctagaa gttggccatt gttaaggaac tccttgaatt aaaaaaacac atattaagac 7621 ttagttttca ttaaaacaaa caaaaataaa cctcagagta acttttaaag tctttttaaa 7681 atggatcttt ctttgttata tgaaaccagt ttggactatt atccaaagta tgtagctacc 7741 actctgcagg aactcaggaa gaggtggaat aagtgttgaa atctccaaac cctgatttca 7801 cttgactctc tgatttcacc tgtgaagaaa gtgggttaat gagaaatcct tcagtgagca 7861 ttttactcat tagtcttcat atgaccccaa tttcttaacc aaaccaaatg gaagattttc 7921 tttctctctc ttcactgaat tatgttttaa aaagaggagg ataattcatc atgaataaca 7981 attataactg gattatggac tcaaagattt gttttccttc tttccaggat gaactccagg 8041 ataaaatcca cccctttgcc cagacacagt ctctagtcta tcccttccct ggacccatcc 8101 ataacagcct cccacaaaac atccctcctc ttactcaaac ccctgtggtg gtgccgcctt 8161 tccttcagcc tgaagtaatg ggagtctcca aagtgaagga ggctatggct cctaagcaca 8221 aagaaatgcc cttccctaaa tatccagttg agccctttac tgaaagccag agcctgactc 8281 tcactgatgt tgaaaatctg caccttcctc tgcctctgct ccagtcttgg atgcaccagc 8341 ctcaccagcc tcttcctcca actgtcatgt ttcctcctca gtccgtgctg tccctttctc 8401 agtccaaagt cctgcctgtt ccccagaaag cagtgcccta tccccagaga gatatgccca 8461 ttcaggcctt tctgctgtac caggagcctg tactcggtcc tgtccgggga cccttcccta 8521 ttattgtaag tctaaattta ctaactgtgc ctgtttaact tctgatgttt gtatgatatt 8581 cgagtaatta agagtcctat aaaaaaatga ataatgaatg gttccaaaat aagcatagct 8641 gagattaatg attgtcagca ttagttataa atagaataag ctggagaacc ttcacctccc 8701 ctccaccacc agatctcaat gtctaggctt acccgtggag attctgatgt aattgttctt 8761 tctatgtaga agaaacttat tgggaagaaa taatataatg gactatgatt taattggtct 8821 gttgagaacc aattaaatta gatgaaagcg attaagtaca ataaagccaa aattgaattt 8881 gataatctca tttggctaag aataacaaac ctaagaaggt ttgctatttt ctacaatttt 8941 gaagttctcc ttatgcacaa ttatttcacc acatgactca tttcacatcg tgtttttgat 9001 atatgagcat atgagggaaa aatactgaga tgcttatttc aatactcagg gaaaatttat 9061 tgccaaaagg caagaaatgt ataattcatt cacttatttt attttattat tttttttatt 9121 tttaaggtct aagaggattt caaagtgaat gccccctcct cacttttggt aagctttagg 9181 atattggagg cagactgatc atttttatag ttaatatctt ttacatttca ttttcctgga 9241 taagccccaa tagtagcaat ttccatcagt gtaccagctt aaagattaat tataaattta 9301 ttttcaatga ttgactgtta tttactggcc tgaaattatg tatctgttat atttcaaata 9361 atgcaaaact gtatatatat ggtgtttaca gatttgattg gttttctttc aatagcctat 9421 atccttatta ttgattgtca tcatttatag aaaaaactga aaataatttc ttatactttt 9481 atgtaaacct gttagagctt attttaaaga tcaactgcat tcacatttct aatctagtca 9541 ttatgagctt caatagtttt atctcactta aaatatatat attgtctttt aattcatgag 9601 tcaaaataca atctcacagt ccagatatgg gacttaaaag ggggatagaa tatagttttg 9661 atattcttaa caatacacat ccttttgtga tcatgattca gcagacattt aataaaatga 9721 ttccaagtaa gccgatgttt ggtcctagag gaatttttat aacctttaag agaaggcata 9781 gcatggtgtt tttgtaataa gatttctttt atgaaaaagt cacaccaaaa ttgcaaatgg 9841 gggtgagatg aagagttata acatataact aaatctatgt ttgttctcta ttccacagaa 9901 ttgactgcga ctggaaatat ggcaactttt caatccttgc atcatgttac taagataatt 9961 tttaaatgag tatacatgga acaaaaaatg aaactttatt cctttattta ttttatgctt 10021 tttcatctta atttgaattt gagtcataaa ctatatattt caaaatttta attcaacatt 10081 agcataaaag ttcaatttta acttggaaat atcatgaaca tatcaaaata tgtataaaaa 10141 taatttctgg aattgtgatt attatttctt taagaatcta tttcctaacc agtcatttca 10201 ataaattaat ccttaggcat atttaagttt tcttgtcttt attatatttt ttttaatgaa 10261 attggtctct ttattgttaa cttaaattta tctttgatgt taaaaagagc tgtggaaaat 10321 taaaattgga tagaattc //