GenBank-Updates@genbank.bio.net (11/01/90)
LOCUS FRGMTDR 3435 bp ds-DNA ORG 01-NOV-1990
DEFINITION R.catesbeiana mitochondrial D-loop region DNA.
ACCESSION M57480
KEYWORDS 12S ribosomal RNA; D-loop; cytochrome b; transfer RNA-Leu;
transfer RNA-Pro; transfer RNA-Thr.
SOURCE R.catesbeiana mitochondrial DNA.
ORGANISM Mitochondrion Rana catesbeiana
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Amphibia;
Lissamphibia; Anura; Neobatrachia; Ranoidea; Ranidae;
Rana catesbeiana.
REFERENCE 1 (bases 1 to 3435)
AUTHORS Yoneyama,Y.
TITLE The nucleotide sequences of the heavy and light strand replication
origins of the Rana catesbeiana mitochondrial genome
JOURNAL J. Nippon Med. Sch. 54, 429-440 (1987)
STANDARD simple staff_entry
FEATURES from to/span description
pept < 1 345 cytochrome b (AA at 1)
orgrpl 1610 1673 H-strand replication
tRNA 2533 2604 Leu-tRNA
tRNA 2607 2677 Thr-tRNA
tRNA 2745 2678 (c) Pro-tRNA
rRNA 2816 > 3435 12SrRNA
anticdn 2565 2567 Leu-tRNA anticodon tag
anticdn 2638 2640 Thr-tRNA anticodon tgt
anticdn 2715 2713 (c) Pro-tRNA anticodon tgg
site 1780 1807 conserved sequence block
site 1853 1880 conserved sequence block
site 1979 1996 conserved sequence block
site 2101 2119 conserved sequence block
tRNA 2747 2816 Phe-tRNA
anticdn 2779 2781 Phe-tRNA anticodon gaa
rpt 1743 1814 tandem repeat copy 1
rpt 1817 1886 tandem repeat copy 2
BASE COUNT 1080 a 789 c 457 g 1109 t
ORIGIN
1 cctcacatta aaccagagtg gtacttccta tttgcttacg ccattctccg ctccatccct
61 aataaactag gcggcgttct cgccctattg ttctcgatct taatcctctt cctaatgcct
121 atcatccaca cctccaagct ccgttcactc atattccgcc caattgctaa aatcttcttc
181 tgaaccctaa ttgctaacac agctattctt acatgaatcg ggggacaacc agtagaagac
241 ccttttatta tcatcggcca gatcacctca ggactatact tcttaatttt tgttcttctt
301 atcccaacat taggcctttt ggaaaacaag cttcttaaag tctaataaag cataaattta
361 cattacctca tacttaatat tatactatta cttatgtata atcatcatct attataatat
421 tatactatta cttatgtata atcatcatct attataatat tatactatta cttatgtata
481 atcatcatct attataatat tatactatta cttatgtata atcatcatct attataatat
541 tatactatta cttatgtata atcatcatct attataatat tatactatta cttatgtata
601 atcatcatct attataatat tatactatat aactccatta catattactt atgtataatc
661 accattcact atagtattta aaacagatat taagtgggcc atcccaatct ttagaattaa
721 cagttatgta caacaacatt tacctataac aaccattaat agataccccc acattataag
781 aatataaacc ttcataagat tatgtacatc ttacaattat aatttaaaaa tacacgtaac
841 atcaatatta cattataata tgtttaatat ccatattatg tataataaac attaaattat
901 ttacaacaag cttatcatgc ccaataaaca agtgacaaat ataacacatt aataacctga
961 ccattaaata atttccacaa catctgcttg caaaagccca tatcatgtat actagattgg
1021 accttccctt gctaaaccta atgcagatct cattcctaag tgagtccaac tggatcttcc
1081 aaattactca attcctccaa caaaaatgta atgctccccc tctaaactta ttaatttaac
1141 acctttaagg ttacatcaca catttacccc tttactgaat gcttcattca tatcatcaag
1201 gtaagacctt cccttgcata agacccctca gacccttata actatcttcc ttaatccact
1261 accatggaca atcttatact aaacataaac tgattaattg cataataaat tacctatacc
1321 ataaataagc cagtcctcaa cactgtaaaa tcacacatga cgcccataca tcagccctat
1381 cgtacccccg tcaaccagcc atggttcggg cctagggagc tggttaacct tccaatggac
1441 ctcgattgta gagtaacagt tcttgccctt tagaaggtaa ctgacggatg tgaatctatg
1501 gacttatctc gcataatcgg gtccaaaatg cattttaaaa ggtaaccctc ctatgcgtta
1561 aatacctgta tacaagctca ggccacttaa tgacagctag aactactggt agtttttttt
1621 ggggtccttt catcagctac tcccagtggg ctcactccta aacaaccggg ttggactaac
1681 ggtgcaggtt ggcaaccact catagtggac tcacggctaa acaataagac cccactatca
1741 gtccaggtta cacgcatcag cattgtccct tgtatgacac attttaatta atgttaaaat
1801 gacataaatg tttaatcctg gtagcatgca ttaacatgtc acttgtatga tgcattttaa
1861 ttaatgttag attgacataa tgcttgatca tcatacctct atatcccccc ccttttcact
1921 ttccaccttt cttacacccc ccccagcgat ttttagcgtt tttgcaaatt tttcgcgtta
1981 cccccccctt tcccccccca caacgatttt ccgatagttt gccttaaaac cccccccgag
2041 attaaggttt atgggaataa ttgctgtagg cctcgccctc cccacacaga gtatctgtaa
2101 tgccttaacc ccaaggatta cagaacccta ccatgggcct ccccgcaata aacaagtcat
2161 atgaaagttt tacttgctaa aatgctcaat aaagtctttg cctataaatg caaatttgtt
2221 tatattttgt ttatattttg tttatatttt gtttatattt tgtttatatt ttgtttatat
2281 tttgtttata ttttgtttat attttgttta tattatatgt atgtaatgtt ttgttatatt
2341 atttaattgg cttcatgtgc acataatata ttatattcat acctatgtaa tattaaatta
2401 gtcttattat tatatttatg cttatacttc atatctacag tataagaact aaacttaaag
2461 tattcttata tatgaagtat atacttatat actagaatcc cctacataag tcatatacat
2521 gaaaaattgt ccgcttttaa aggaaaagag ccctccactg gtcttaggcg ccagcatctc
2581 ttggtgcaag tccaagtaaa agctatgcct tgatagctta aactaaagca ccggtcttgt
2641 aagccggaga ctgtagccta acccctactc aaggcttcag gataaaagga ctttaacctt
2701 taccaccggt ccccaaaacc ggcattctac ctaaactata tcctgtactc ttatagctta
2761 atattaaagt atagcgctga aaacgctaag atgaacccta aaaagttcta ggggtacaaa
2821 ggtttggtcc tagccttatt atcaactgtt tctcaactta cacatgcaag tatcagcaca
2881 cccgtgagaa cgccctttaa atcttaccca gataaaggag ctggtatcag gcacaaaccc
2941 tccgcccaca acacctagtc tcaccacacc ctcaagggta atcagcagtg attaattttg
3001 cgtatgagcg tcagcttgac tcagttagag aaaagagggc cggctaaccc ggtgccagcc
3061 gccgcggcta caccgtgggg ctcgagttga tagtcatcgg cgttaagcgt gattaaagtt
3121 attacaaatt aaggttaaat taatacttag tagttttatg cttgttatta agaaatccac
3181 aaacgaaagt taccctaatt attatgcttg aatacacgac agctaggaaa acaaactggg
3241 attagatacc ccactatgcc tagccgtaaa caattaattt acaccaataa gcgccaggga
3301 attacgagca atgcttaaaa cccaaaggat ttgacggtgt cccaccccac tagaggagcc
3361 tgttctataa tcgatgatcc ccgatatacc cgaccatttc tcgcttatca gtctgtatac
3421 ctccgtcgaa agctt
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