GenBank-Updates@genbank.bio.net (11/06/90)
LOCUS CHKCOL3 2462 bp ds-DNA VRT 06-NOV-1990
DEFINITION Chicken alpha-1 collagen type III gene, 3' end.
ACCESSION M36662
KEYWORDS alpha-1 type III collagen.
SOURCE Chicken DNA, clone lambda-C3-C1-24.
ORGANISM Gallus gallus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Aves;
Neornithes; Neognathae; Galliformes; Phasianidae.
REFERENCE 1 (bases 1 to 2462)
AUTHORS Yamada,Y., Kuehn,K. and de Crombrugghe,B.
TITLE A conserved nucleotide sequence, coding for a segment of the
C-propeptide, is found at the same location in different collagen
genes
JOURNAL Nucleic Acids Res. 11, 2733-2744 (1983)
STANDARD simple staff_review
FEATURES from to/span description
pept / 295 577 alpha-1 collagen type III, last exon -3 (AA at
295)
1049 1239 alpha-1 collagen type III, last exon -2
1417 1659 alpha-1 collagen type III, last exon -1
2241 2387 alpha-1 collagen type III, last exon
IVS < 1 294 COLAIII intron last -3
IVS 578 1048 COLAIII intron last -2
IVS 1240 1416 COLAIII intron last -1
IVS 1660 2240 COLAIII intron last
BASE COUNT 716 a 479 c 475 g 686 t 106 others
ORIGIN
1 cattatataa aacactcagt taaatatccc tctcagaaaa ttctggtagc aaattatcta
61 gtaattgcag ctatttttaa gaaggttcag atcgtttgta gttgagtgtg atttctgatg
121 tattgggtgc tgtgttagtc ccagataatt atagacttct ccatatacca tgggaaagta
181 ggcgtctcac tttgtgtcct tgcaatctct aaagaagggc tgcttttttt ttcttcagac
241 tcttctttcc tgttgttgtt ttcgcttttc ctgttttttc ttgtttcctt ttagggtcca
301 ccaggccagc ctggtctacc tggcccttct ggtccgcctg gtccatgttg tggtggtggc
361 gtagcttccc tgggtgctgg agaaaaaggt ccagtgggct atggatatga atatcgagat
421 gagccaaaag aaaatgagat caacctgggt gaaatcatgt cttcaatgaa gtcaattaac
481 aaccagattg aaaatatcct tagtcctgat ggatcacgaa agaatccagc tcgcaactgc
541 agagatctga aattctgcca tcctgagctc aagagtggta tgtcaggttt ttgttggcag
601 tcatggtaac agatcatggt gggttttctt tcctaaatgc tatggtgttt gagtatttaa
661 atgcagagac ttgccgtaaa aattatttgg tttgtttaac aaatgataaa ttacagtaaa
721 ttacagtaaa cacttaaaaa taaccagatc ctctgttttc cacggagata tatactgact
781 gcagtccact ccttagtttc ttataaaaga aagtttaaat cctcttccnn nnnnnnnnnn
841 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna gtacattttt attcatctga
901 tttttctgtt gcttctctac tatcaaaatt aaatatgctt tcttatttgc tcaggaatgt
961 gaatataaat aagctggtac tatacagtca aattcttctc cgaccataca tgctaacccc
1021 ccaaataatg tttttttttc acctatagga gagtactgga ttgatcctaa ccaaggctgc
1081 aagatggatg caattaaagt gtactgtaat atggaaactg gtgagacatg cctcagtgct
1141 aaccctgcca ctgtgccaag gaaaaactgg tggactactg aaagtnnnag tggaaagaaa
1201 catgtatggt ttggagagtc tatgaagggt ggttcccagg taagaaatta ccacagttag
1261 cagcccaaaa ggtcatcaat gtaacataat caaaatttac tgagaaatac ccctgaagtt
1321 aatttgagct aaacttccaa tgggtgaaat actaactacc caaactatct agaggtcact
1381 acacgaaaac tgttgttcac atgttgtact ttccagttta gctatggaga tcctgacctc
1441 cctgaggatg tctctgaagt tcagctggca ttcctccgca tcctctccag ccgtgcctcc
1501 cagaacatca cctaccactg caagaacagc attgcctaca tgaatcaagc cagtgggaac
1561 gttaaaaaag ccctgaagct gatgagctct gtggaaactg atatcaaggc tgaaggaaac
1621 agcaaataca tgtatgctgt tctggaagat ggctgtactg taagtaaata acactttcat
1681 agagtctaat aactccctga tgattgcgag acccaaaata aaggaaggga gagcttgaca
1741 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nntattcaga
1801 tctgtacttc agagtcatct ccctccttta gagcaaaaga ggaaggccta caactaaagg
1861 tacgcgctct aagcttgaat cccagcccca ggtcttcaca aaaacactga aagaggagta
1921 gtaggtggtg gtcaatcaac tgtcatgcaa aaaaaaaaaa aaaaaagtag acaagacagt
1981 cacattaagg aaatggcaaa atcagttatg ttgcagattc aacatgaagc attatgcctt
2041 gcttaataca gcagaaacta gtagagaaga gcagaaatac aggtgaggca tgctggtcgc
2101 agtagccgca gccttttcaa gaaatactga acaccagaca caattcctgc ctcctgctag
2161 attcccaaaa gcagaatgca acaaacaaca gctttacagt atgacacaat tttgtttttg
2221 ttttttttta attttcacag aaacacactg gtgaatgggg taaaacagtt tttgaataca
2281 gaactcgcaa aacaatgagg ttacctgtgg ttgatattgc acccatagat attggtggtc
2341 ccgatcagga atttggtgtg gacgttggcc cggtctgctt cttataaatc aaagatcctg
2401 ctctttctga caccccagca aacagattca cactccaact gtgctccttt gttttaaccc
2461 tg
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