[bionet.molbio.genbank.updates] Chicken alpha-1 collagen type III gene, 3' end.

GenBank-Updates@genbank.bio.net (11/06/90)

LOCUS       CHKCOL3      2462 bp ds-DNA             VRT       06-NOV-1990
DEFINITION  Chicken alpha-1 collagen type III gene, 3' end.
ACCESSION   M36662
KEYWORDS    alpha-1 type III collagen.
SOURCE      Chicken DNA, clone lambda-C3-C1-24.
  ORGANISM  Gallus gallus
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Aves; 
            Neornithes; Neognathae; Galliformes; Phasianidae.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Yamada,Y., Kuehn,K. and de Crombrugghe,B.
  TITLE     A conserved nucleotide sequence, coding for a segment of the
            C-propeptide, is found at the same location in different collagen
            genes
  JOURNAL   Nucleic Acids Res. 11, 2733-2744 (1983)
  STANDARD  simple staff_review
FEATURES       from  to/span     description
    pept    /   295      577     alpha-1 collagen type III, last exon -3 (AA at
                                 295)
               1049     1239     alpha-1 collagen type III, last exon -2
               1417     1659     alpha-1 collagen type III, last exon -1
               2241     2387     alpha-1 collagen type III, last exon
    IVS     <     1      294     COLAIII intron last -3
    IVS         578     1048     COLAIII intron last -2
    IVS        1240     1416     COLAIII intron last -1
    IVS        1660     2240     COLAIII intron last
BASE COUNT      716 a    479 c    475 g    686 t    106 others
ORIGIN      
        1 cattatataa aacactcagt taaatatccc tctcagaaaa ttctggtagc aaattatcta
       61 gtaattgcag ctatttttaa gaaggttcag atcgtttgta gttgagtgtg atttctgatg
      121 tattgggtgc tgtgttagtc ccagataatt atagacttct ccatatacca tgggaaagta
      181 ggcgtctcac tttgtgtcct tgcaatctct aaagaagggc tgcttttttt ttcttcagac
      241 tcttctttcc tgttgttgtt ttcgcttttc ctgttttttc ttgtttcctt ttagggtcca
      301 ccaggccagc ctggtctacc tggcccttct ggtccgcctg gtccatgttg tggtggtggc
      361 gtagcttccc tgggtgctgg agaaaaaggt ccagtgggct atggatatga atatcgagat
      421 gagccaaaag aaaatgagat caacctgggt gaaatcatgt cttcaatgaa gtcaattaac
      481 aaccagattg aaaatatcct tagtcctgat ggatcacgaa agaatccagc tcgcaactgc
      541 agagatctga aattctgcca tcctgagctc aagagtggta tgtcaggttt ttgttggcag
      601 tcatggtaac agatcatggt gggttttctt tcctaaatgc tatggtgttt gagtatttaa
      661 atgcagagac ttgccgtaaa aattatttgg tttgtttaac aaatgataaa ttacagtaaa
      721 ttacagtaaa cacttaaaaa taaccagatc ctctgttttc cacggagata tatactgact
      781 gcagtccact ccttagtttc ttataaaaga aagtttaaat cctcttccnn nnnnnnnnnn
      841 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna gtacattttt attcatctga
      901 tttttctgtt gcttctctac tatcaaaatt aaatatgctt tcttatttgc tcaggaatgt
      961 gaatataaat aagctggtac tatacagtca aattcttctc cgaccataca tgctaacccc
     1021 ccaaataatg tttttttttc acctatagga gagtactgga ttgatcctaa ccaaggctgc
     1081 aagatggatg caattaaagt gtactgtaat atggaaactg gtgagacatg cctcagtgct
     1141 aaccctgcca ctgtgccaag gaaaaactgg tggactactg aaagtnnnag tggaaagaaa
     1201 catgtatggt ttggagagtc tatgaagggt ggttcccagg taagaaatta ccacagttag
     1261 cagcccaaaa ggtcatcaat gtaacataat caaaatttac tgagaaatac ccctgaagtt
     1321 aatttgagct aaacttccaa tgggtgaaat actaactacc caaactatct agaggtcact
     1381 acacgaaaac tgttgttcac atgttgtact ttccagttta gctatggaga tcctgacctc
     1441 cctgaggatg tctctgaagt tcagctggca ttcctccgca tcctctccag ccgtgcctcc
     1501 cagaacatca cctaccactg caagaacagc attgcctaca tgaatcaagc cagtgggaac
     1561 gttaaaaaag ccctgaagct gatgagctct gtggaaactg atatcaaggc tgaaggaaac
     1621 agcaaataca tgtatgctgt tctggaagat ggctgtactg taagtaaata acactttcat
     1681 agagtctaat aactccctga tgattgcgag acccaaaata aaggaaggga gagcttgaca
     1741 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nntattcaga
     1801 tctgtacttc agagtcatct ccctccttta gagcaaaaga ggaaggccta caactaaagg
     1861 tacgcgctct aagcttgaat cccagcccca ggtcttcaca aaaacactga aagaggagta
     1921 gtaggtggtg gtcaatcaac tgtcatgcaa aaaaaaaaaa aaaaaagtag acaagacagt
     1981 cacattaagg aaatggcaaa atcagttatg ttgcagattc aacatgaagc attatgcctt
     2041 gcttaataca gcagaaacta gtagagaaga gcagaaatac aggtgaggca tgctggtcgc
     2101 agtagccgca gccttttcaa gaaatactga acaccagaca caattcctgc ctcctgctag
     2161 attcccaaaa gcagaatgca acaaacaaca gctttacagt atgacacaat tttgtttttg
     2221 ttttttttta attttcacag aaacacactg gtgaatgggg taaaacagtt tttgaataca
     2281 gaactcgcaa aacaatgagg ttacctgtgg ttgatattgc acccatagat attggtggtc
     2341 ccgatcagga atttggtgtg gacgttggcc cggtctgctt cttataaatc aaagatcctg
     2401 ctctttctga caccccagca aacagattca cactccaact gtgctccttt gttttaaccc
     2461 tg
//