GenBank-Updates@genbank.bio.net (11/16/90)
LOCUS HAMMHHM1A1 1711 bp ds-DNA ROD 16-NOV-1990
DEFINITION Syrian hamster MHC class I gene (Hm-1-a haplotype), exons 1, 2 and
3.
ACCESSION M58148 M28982
KEYWORDS cell surface antigen; class I gene;
major histocompatibility complex.
SEGMENT 1 of 2
SOURCE Syrian hamster (Hm-1-a haplotype) liver DNA.
ORGANISM Mesocricetus sp.
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae;
Cricetini.
REFERENCE 1 (bases 1 to 1711)
AUTHORS McGuire,K.L., Duncan,W.R. and Tucker,P.W.
TITLE Structure of a class I gene from syrian hamster
JOURNAL J. Immunol. 137, 366-372 (1986)
STANDARD simple staff_review
FEATURES from to/span description
pept 88 157 MHC class I protein, exon 1
362 631 MHC class I protein, exon 2
843 + 1118 MHC class I protein, exon 3
IVS 158 361 MHC class I intron 1
IVS 632 842 MHC class I intron 2
IVS 1119 > 1711 MHC class I intron 3
BASE COUNT 427 a 431 c 459 g 394 t
ORIGIN
1 agagaacctg gtagaagtct ctatgaagac aaattacaga gcacagggcc atatagggct
61 gtgcttgggc tccccctaac ccttaagatg gggatccctg tgctctgtgc cctcttgctg
121 atggctgcct cccaagcccc gaccaggacc catgctggtg agtgcaggct caggagggaa
181 atgacctctg tgtgtttggc gggggctgca ccaggaaagc tgtgtccctg catcgcccag
241 ccagaccctc ctgcctcttc cccacccgca tcctgagctc tgcgcccagc tcccctcccg
301 gcctgagtac cagcctgagg tccggggagg aggtcaaggt ctcaccatgc tccacaccca
361 ggctcgcact cgctgcggta tttctacatc attgtttcct ggcccgacct cgtggagccc
421 cggtacatgg aagtcggcta cgttgacgac acacagttcg tgcgcttcga cagcgacctg
481 gagaatccga gatatgagcc gcgggcgccg tggatggagc aggaggggcc agagtattgg
541 gagagggaga cacggggagc caaagactgg gaacagattt tccgagttga cctgaggacc
601 ctactaggct actacaacca gagtgagggc agtgagtgaa gatggaggtt aagactttcc
661 atgtccctag gtaagggcct gagttatgcc aggtcccaag tccaaggtcc aggaggagga
721 gaccagggac caggaccagt ttccctttca ggttagagga tacctgggtg ggcggggcac
781 gagcaggaca ggagggcaag gctgacctgg ggtgagcagg gctgaccttg ggatccccgc
841 agtctctcac atcattcaga gtatggtcgg ctgtcacgtg gggtcggacg ggcgcctcct
901 ccgcgggtac agtcaggacg cctatgatgg cgatgattac atcgccctga acgaggacct
961 gaggacgtgg actgcggctg acacagccac acagatcacc aggcgcaagt gggacctggc
1021 tggtgttgca gagcatgaaa gggcctacct ggaggacgag tgtgtgcagt ggctccgcag
1081 atacctggag aacaggaagg agcagctgct gcgcacaggt gcaggggctg cgggcaaatc
1141 ctacctctga cctcgggctt agttctgagg aagaagagac ccctcacctg ggggtaatgc
1201 cccattttct acttattttt aatttttaaa atttagtaca gaaaactcac actctaaaat
1261 tgacaagaac aaaggctata tccctctcag tgaatataca tggttggtga agccatcatg
1321 aattcgtgga agttccagtt ggattttaca cattcctttt gaaatataat tcatgaactt
1381 atccagcacc aacacgcaaa aaaaaaagga tagaaagaaa atccaagaca gatatataac
1441 tggaaaacaa ttaaccttat aacctgtttc aaaactcaga cctgtactca gacctttctc
1501 attcccaata tttagccttt cttgttgtct tttcgtcgtc atgctatact gtacacatac
1561 gtaaacttat ttacatatct gcatacattg ctgactacat atgaggaaat acaatgtaga
1621 ttttctacct gagattgtat gacctcactt aatatgtaca tgctaagttc atccagtttc
1681 ctgtgtagtt ttgtagttac attgtttaga g
//GenBank-Updates@genbank.bio.net (11/16/90)
LOCUS HAMMHHM1A2 2534 bp ds-DNA ROD 16-NOV-1990
DEFINITION Syrian hamster MHC class I gene (Hm-1-a haplotype).
ACCESSION M58164
KEYWORDS cell surface antigen; class I gene;
major histocompatibility complex.
SEGMENT 2 of 2
SOURCE Syrian hamster (Hm-1-a haplotype) liver DNA.
ORGANISM Mesocricetus sp.
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae;
Cricetini.
REFERENCE 1 (bases 1 to 2534)
AUTHORS McGuire,K.L., Duncan,W.R. and Tucker,P.W.
TITLE Structure of a class I gene from syrian hamster
JOURNAL J. Immunol. 137, 366-372 (1986)
STANDARD simple staff_entry
FEATURES from to/span description
pept + 564 839 MHC class I protein, exon 4
966 1082 MHC class I protein, exon 5
1257 1289 MHC class I protein, exon 6
1424 1467 MHC class I protein, exon 7
IVS < 1 563 MHC class I intron 3
IVS 840 965 MHC class I intron 4
IVS 1083 1256 MHC class I intron 5
IVS 1290 1423 MHC class I intron 6
BASE COUNT 583 a 668 c 644 g 639 t
ORIGIN
1 cttcttcttg tcctactttg atcccattta taccaatttc tgtctatttc tgatagctta
61 tataaaatct tctctgtatc aaatacaaag gtggagagtg tacacccttg tctccttcct
121 gtatttacag gaagctctgg gtgtctctcc tttagacata atatccacct gtctccatgt
181 ttctcacata tgggatgtgg gaagttctat agtgtctcct gaccctttat gagagactgg
241 ctttcccagg ctcgcccttc tgtcaggcag ttcagagtgt ctcaggaggg aaggagagaa
301 ggtccctgaa atgactaagg cagttcacct tcagtctgca gtgctgtgta gggccacaag
361 ccttgctcag gcccagttct ctgcccacac ctgaggtctc tggggtctga attcccaaag
421 aaagcattat ccagaaccca gtgtctaagc tacaggggct tttcacccct ccctcacccc
481 atttctgatc cacacaggga tggtcacagg gaccctgctg gagtccctac aaatcacctg
541 acatttccaa ctcttctcct cagaccctcc aaaggcacat gtgacccatc actccaaccc
601 tgaaggtaaa accaccctga ggtgctgggc cctgggcttc taccccgctg acatcaccct
661 gacctggaag agggatgagg aggaactgac ccaggacatg gagatggtgg agaccagacc
721 tgcaggagac ggaaccttcc agaagtgggc agctgtggag gtgcctattg gagaggagca
781 gagatacaca tgccatgtgg agcatgaggg actgtctgag cccctcaccc tgagatggag
841 taaggaggga ggggtgcaga gatggggtca gggaaacatg gagccttctg cagagcctga
901 gcagggtcag ggctgagaga tggggtcatg accctcacct tcccttcctg tccttccctt
961 cccagagcct cctcagtcca ctgtccccag catggcagtc attgctgttc tggttctcct
1021 tggagctgtg accatcattg gagctgtggt ggctgttgtg aggaagagga ggagaaacac
1081 aggtaggaag gggcagggtg tgagttctct ctcagcccct tttagcagtg tgctctgctc
1141 atggaaacac atccacaccc tcattgttcc tgtctctagc cagggtctgc tgtcagttct
1201 ggaaacttcc tagggtcagg gtcttccctg gtctctcaca tcttttcttg tcacaggtgg
1261 aaaaagaggg aactatgctc aggctccagg taactgtggg gaaccggctt gtccctaaag
1321 cctgttgagt gaagctggtt gggaaaccca acagcccata attcctcctc catccacatc
1381 ctctcagtaa ccgcaatggt ccttgtcatt tcttcttctg cagacaggga cagtgcccag
1441 agctctgact cctctctgga gacttgaaaa ggtgacactc tggggtcctg ggttggggct
1501 gaggaacaaa ggaaaagact ggtgaaggga ccagaccctc acccagcccc cctgctttat
1561 cagccatgac aggctgcaga aaagtcatgg aggcccctga ctcagcacat gttggacttg
1621 ctggtcctgc ccaggtcact aggaggtcag ataccaatca gaagttagct ggtggactct
1681 ggatgtgttt aaggctctgg gcatgcttta tggtaaaagt ggtctaccag tgacttgcaa
1741 acacatgaca accagttgac caatcggcac aggacagatt gcccagcaca gaagtgcacc
1801 aatcctgaga ctgttgctta cccttagaca ctccccttat actgcctggc agtttctctg
1861 ggtccttctc atgccaactg tcctgttgga catacgatgg cccctagtta atggggttag
1921 ctcattaaac aacaataact gactctttgc ttttgcatcg gaatgggtct cttggtgatt
1981 ttgggggttc agaatttaag cacaacactg tgtcccagga cttctcagaa cttagacatt
2041 tgaatgagtc acagtgggcg tttgagatgt ctttatactg actgtccatc actctttgtc
2101 tttagcttca gacagtggcc tcacagggac acattctcac tcaagaaaga gcaatgttgg
2161 aagctgtctg ctttctcctg tgaagagcat ccagcccggt cctgtccacc aggaccctac
2221 ccctgcacgg ccccttctac ctccacagtc aaccttcctg gtccagcaca ggcaggagga
2281 gacaactcta tcctgtcacc tgcatgcttc catgagctgc acaccttggc ttccccactg
2341 aaaataaaaa tctggatgtg aacttgatag ttcatgtcct tgacctctga aagtgtgatg
2401 gagaaaataa atggcagcat ggagaatctt ccagaacctg tgtctgctgt ggtgactgtc
2461 agcggggaca ggagtctgtg ggagctgagt gagatggggc tgtgacaggt agagctcagt
2521 ccacgtggct ttgg
//