[bionet.molbio.genbank.updates] E.coli cytochrome O ubiquinol oxidase

GenBank-Updates@genbank.bio.net (01/04/91)

LOCUS       ECOCYOA      5819 bp ds-DNA             BCT       04-JAN-1991
DEFINITION  E.coli cytochrome O ubiquinol oxidase (cyoA, cyoB, cyoC, cyoD and
            cyoE genes, complete cds.
ACCESSION   J05492
KEYWORDS    cyoA gene; cyoB gene; cyoC gene; cyoD gene; cyoE gene;
            cytochrome o ubiquinol oxidase.
SOURCE      E.coli (strain K12) DNA.
  ORGANISM  Escherichia coli
            Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively
            anaerobic rods; Enterobacteriaceae.
REFERENCE   1  (bases 1 to 5819)
  AUTHORS   Chepuri,V., Lemieux,L., Au,D.C.-T. and Gennis,R.B.
  TITLE     The sequence of the cyo operon indicates substantial structrual
            similarities between the cytochrome o ubiquinol oxidase of
            Escherichia coli and the AA-3-type family of cytochrome C oxidases
  JOURNAL   J. Biol. Chem. 265, 11185-11192 (1990)
  STANDARD  simple staff_entry
COMMENT     Draft entry and computer-readable [or printed] sequence for [J.
            Biol. Chem. 265, 11185-11192 (1990)]
            kindly submitted by L.J. Lemieux, 31-JUL-1990.
FEATURES             Location/Qualifiers
     CDS             801..1748
                     /gene="cyoA"
                     /product="cytochrome o ubiquinol oxidase subunit
                     II"
     CDS             1770..3761
                     /gene="cyoB"
                     /product="cytochrome o ubiquinol oxidase B subunit
                     I"
     CDS             3751..4365
                     /gene="cyoC"
                     /product="cytochrome o ubiquinol oxidase C subunit"
     CDS             4365..4694
                     /gene="cyoD"
                     /product="cytochrome o ubiquinol oxidase C subunit"
     CDS             4706..5596
                     /gene="cyoE"
                     /product="cytochrome o ubiquinol oxidase C subunit"
BASE COUNT     1239 a   1460 c   1504 g   1616 t
ORIGIN      
        1 actactgtcg acattctatc tattctccgt cgccgctgcc gtaccagggc ttattttgct
       61 gctggtttgc cgccagacgc ttgaatatac acgagtaaat gacaacttta tctcccgtac
      121 cgcatatccg gcaggttatg cctttgccat gtggacactg gcggcgggcg tcagcctgtt
      181 ggccgtgtgg ttactgctat tgacgatgga cgcgctggat ttgacgcact tctctttcct
      241 gcctgctctg ctggaagtcg gggttttagt cgccctttct ggcgtcgtgc ttggtggttt
      301 gctggattat ctggcgctac gaaaaacgca tctgacgtaa tctgtaaata ttatttagct
      361 gtagtaatca ctcgccgtaa ttattacggc taaataaaca tcagtatcgc ttattaatat
      421 ttgttctttt gtgcggctta gcgtttggaa attattggcg ccatttataa attctatttt
      481 tcttacacga ttcagctaat gagtctttat tttctcatca cccagttgtc actctaatga
      541 taattatttg ttgaataatt gttttatttc acattggtta taccaattgc ccgcccagac
      601 tccttcagca ctcccctttt gttataacgc ccttttgcaa cagcttctta aaatcaacct
      661 gatatgtttt gccaacatat gtgacctggc agccaaatcc aagtaacagg aatttaatca
      721 tgtttacagt aatttaacct tcccgtaaaa tgcccacaca ctttaaacgc caccagatcc
      781 cgtggaattg aggtcgttaa atgagactca ggaaatacaa taaaagtttg ggatggttgt
      841 cattatttgc aggcactgta ttgctcagtg gctgtaattc tgcgctgtta gatcccaaag
      901 gacagattgg tctggagcaa cgttcactga tactgacggc atttggcctg atgttgattg
      961 tcgttattcc cgcaatcttg atggctgttg gtttcgcctg gaagtaccgt gcgagcaata
     1021 aagatgctaa gtacagcccg aactggtcac actccaataa agtggaagct gtggtctgga
     1081 cggtacctat cttaatcatc atcttccttg cagtactgac ctggaaaacc actcacgctc
     1141 ttgagcctag caagccgctg gcacacgacg agaagcccat taccatcgaa gtggtttcca
     1201 tggactggaa atggttcttc atctacccgg aacagggcat tgctaccgtg aatgaaatcg
     1261 ctttcccggc gaacactccg gtgtacttca aagtgacctc caactccgtg atgaactcct
     1321 tcttcattcc gcgtctgggt agccagattt atgccatggc cggtatgcag actcgcctgc
     1381 atctgatcgc caacgaaccc ggcacttatg acggtatctc cgccagctac agcggcccgg
     1441 gcttctcagg catgaagttc aaagctattg caacaccgga tcgcgccgca ttcgaccagt
     1501 gggtcgcaaa agcgaagcag tcgccgaaca ccatgtctga catggctgcg ttcgaaaaac
     1561 tggccgcgcc tagcgaatac aaccaggtgg aatatttctc caacgtgaaa ccagacttgt
     1621 ttgccgatgt aattaacaag tttatggctc acggtaagag catggacatg acccagccag
     1681 aaggtgagca cagcgcacac gaaggtatgg aaggcatgga catgagccac gcggaatccg
     1741 cccattaaag gggttgagga agaataaaga tgttcggaaa attatcactt gatgcagtcc
     1801 cgttccatga acctatcgtc atggttacga tcgctggcat tattttggga ggtctggcgc
     1861 tcgttggcct gatcacttac ttcggtaagt ggacctacct gtggaaagag tggctgacct
     1921 ccgtcgacca taaacgcctc ggtatcatgt atatcatcgt ggcgattgtg atgttgctgc
     1981 gtggttttgc tgacgccatt atgatgcgta gccagcaggc tcttgcctcg gcgggcgaag
     2041 cgggcttcct gccacctcac cactacgatc agatctttac cgcgcacggc gtgattatga
     2101 tcttcttcgt agcgatgcct ttcgttatcg gtctgatgaa cctggtggtt ccgctgcaga
     2161 tcggcgcgcg tgacgttgcg ttcccgttcc tcaacaactt aagcttctgg tttaccgttg
     2221 ttggtgtgat tctggttaac gtttctctcg gcgtgggcga atttgcgcag accggctggc
     2281 tggcctatcc accgctatcg ggaatagagt acagtccggg agtcggtgtc gattactgga
     2341 tatggagtct ccagctatcc ggtataggta cgacgcttac cggtatcaac ttcttcgtta
     2401 ccattctgaa gatgcgcgca ccgggcatga ccatgttcaa gatgccagta tttacctggg
     2461 catcactgtg cgcgaacgta ctgattattg cttccttccc aattctgacg gttaccgtcg
     2521 cgttgttgac cctggatcgc tatctgggca cccatttctt taccaacgat atgggtggca
     2581 acatgatgat gtacatcaac ctgatttggg cctggggcca cccggaagtt tacatcctga
     2641 tcctgcctgt tttcggtgtg ttctccgaaa ttgcggcaac cttctcgcgt aaacgtctgt
     2701 ttggttatac ctcgctggta tgggcaaccg tctgtatcac cgtgctgtcg ttcatcgttt
     2761 ggctgcacca cttctttacg atgggtgcgg gcgcgaacgt aaacgccttc tttggtatca
     2821 ccacaatgat tatcgccatc ccgaccgggg tgaagatctt caactggctg ttcaccatgt
     2881 atcagggccg catcgtgttc cattctgcga tgctgtggac catcggtttt atcgtcacct
     2941 tctcggtggg cgggatgact ggcgtgctgc tggccgtacc gggcgcggac ttcgttctgc
     3001 ataacagcct gttcctgatt gcgcacttcc ataacgtgat catcggcggc gtggtcttcg
     3061 gctgcttcgc agggatgacc tactggtggc ctaaagcgtt cggtttcaaa ctgaacgaaa
     3121 cctggggtaa acgcgcgttc tggttctgga tcatcggctt cttcgttgcc tttatgccac
     3181 tgtatgcgct gggcttcatg ggcatgaccc gtcgtttgag ccagcagatt gacccgcagt
     3241 tccacaccat gctgatgatt gcagccagcg gtgcagtact gattgcgctg ggtattctct
     3301 gcctcgttat tcagatgtac gtttctattc gcgaccgcga ccagaaccgt gacctgactg
     3361 gcgacccgtg gggtggccgt acgctggagt gggcaacctc ttccccgcct ccgttctata
     3421 actttgccgt agtgccgcac gttcacgaac gtgatgcatt ctgggaaatg aaagagaaag
     3481 gcgaagcgta taaaaagcct gaccactatg aagaaattca tatgccgaaa aacagcggtg
     3541 caggtatcgt cattgcagct ttctccacca tcttcggttt cgccatgatc tggcatatct
     3601 ggtggctggc gattgttggc ttcgcaggca tgatcatcac ctggatcgtg aaaagcttcg
     3661 acgaggacgt ggattactac gtgccggtgg cagaaatcga aaaactggaa aaccagcatt
     3721 tcgatgagat tactaaggca gggctgaaaa atggcaactg atactttgac gcacgcgact
     3781 gcccacgcgc acgaacacgg gcaccacgat gcaggcggaa ccaaaatctt cggattttgg
     3841 atctacctga tgagcgactg cattctgttc tctatcttgt ttgctaccta tgccgttctg
     3901 gtgaacggca ccgcaggcgg cccgacaggt aaggacattt tcgaactgcc gttcgttctg
     3961 gttgaaactt tcttgctgtt gttcagctcc atcacctacg gcatggcggc tatcgccatg
     4021 tacaaaaaca acaaaagcca ggttatctcc tggctggcgt tgacctggtt gtttggtgcc
     4081 ggatttatcg ggatggaaat ctatgaattc catcacctga ttgttaacgg catgggtccg
     4141 gatcgcagcg gcttcctgtc agcgttcttt gcgctggtcg gcacgcacgg tctgcacgtc
     4201 acttctggtc ttatctggat ggcggtgctg atggtgcaaa tcgcccgtcg cggcctgacc
     4261 agcactaacc gtacccgcat catgtgcctg agcctgttct ggcacttcct ggatgtggtt
     4321 tggatctgtg tgttcactgt tgtttatctg atgggggcga tgtaatgagt cattctaccg
     4381 atcacagcgg cgcgtcccat ggcagcgtaa aaacctacat gacaggcttt atcctgtcga
     4441 tcattctgac ggtgattccg ttctggatgg tgatgacagg agctgcctct ccggccgtaa
     4501 ttctgggaac aatcctggca atggcagtgg tacaggttct ggtgcatctg gtgtgcttcc
     4561 tgcacatgaa taccaaatca gatgaaggct ggaacatgac ggcgtttgtc ttcaccgtgc
     4621 taatcatcgc tatcctggtt gtaggctcca tctggattat gtggaacctc aactacaaca
     4681 tgatgatgca ctaagagcgg cggttatgat gtttaagcaa tacctgcaag taacgaaacc
     4741 aggcatcatc tttggcaacc tgatctcggt gattggggga ttcctgctgg cctcaaaggg
     4801 cagcattgat tatcccctgt ttatctacac gctggttggg gtgtcactgg ttgtggcgtc
     4861 gggttgtgtg tttaacaact acatcgacag ggatatcgac agaaagatgg aaaggacgaa
     4921 gaatcgggtg ctggtgaaag gcctgatctc tcctgctgtc tcgctggtgt acgccacgtt
     4981 gctgggtatt gctggcttta tgctgctgtg gtttggcgcg aatccgctgg cctgctggct
     5041 gggggtgatg ggctttgtgg tttatgtcgg cgtttatagc ctgtacatga aacgccactc
     5101 tgtctacggc acgttgattg gttcgctctc cggcgctgcg ccgccggtga tcggctactg
     5161 tgcggtaacc ggtgagttcg atagcggcgc agcgatcctg ctggctatct tcagcctgtg
     5221 gcagatgcct cactcctatg ccatcgccat tttccgcttt aaggattacc aggcggcaaa
     5281 cattccggta ttgccagtgg taaaaggcat ttcggtggcg aagaatcaca tcacgctgta
     5341 tatcatcgcc tttgccgttg ccacgctgat gctctctctt ggcggttacg ctgggtataa
     5401 atatctggtg gtcgccgcgg cggttagcgt ctggtggtta ggtatggctc tgcgcggtta
     5461 taaagttgct gatgacagaa tctgggcgcg caagctgttc ggcttctcta tcatcgccat
     5521 cactgccctc tcggtgatga tgtccgttga ttttatggta ccggactcgc atacgctgct
     5581 ggctgctgtg tggtaacaaa acctctctat taaaaaggtg ctacggcacc ttttttctta
     5641 gcattagaaa catatccctc tcgaaatatt tactaaaaaa tccgcatgtt taccccattc
     5701 gtttgccgct ttacactagt cgcgaattta aaacagaggt ggtaatgaac gattataaaa
     5761 tgacgccagg tgagaggcgc gcgacctggg gtttagggac cgtattctcg ttgcgcatg
//