GenBank-Updates@genbank.bio.net (01/10/91)
LOCUS MUSOPS 9483 bp ds-DNA ROD 10-JAN-1991 DEFINITION Mouse opsin (MOPS) gene, complete cds. ACCESSION M55171 KEYWORDS opsin. SOURCE Mouse adult liver DNA, clone lambda-MO1. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 9483) AUTHORS Al-Ubaidi,M.R., Pittler,S.J., Champagne,M.S., Triantafyllos,J.T., McGinnis,J.F. and Baehr,W. TITLE Mouse opsin: gene structure and molecular basis of multiple transcripts JOURNAL J. Biol. Chem. 265, 20563-20569 (1990) STANDARD full staff_entry FEATURES Location/Qualifiers CDS join(1434..1794,3283..3451, 4525..4690,4808..5047,6019..6129) /gene="MOPS" /product="opsin" mRNA join(1338..1794,3283..3451, 4525..4690,4808..5047,6019..9483) /gene="MOPS" /product="opsin" exon 1338..1794 /number=1 /gene="MOPS" /codon_start=1338 intron 1795..3282 /gene="MOPS" exon 3283..3451 /number=2 /gene="MOPS" /codon_start=3283 intron 3452..4524 /gene="MOPS" exon 4525..4690 /number=3 /gene="MOPS" /codon_start=4525 intron 4691..4807 /number=3 /gene="MOPS" exon 4808..5047 /number=4 /gene="MOPS" /codon_start=4808 intron 5048..6018 /number=4 /gene="MOPS" exon 6019..9483 /number=5 /gene="MOPS" /codon_start=6019 polyA_signal 6477..6482 /gene="MOPS" polyA_signal 6862..6877 /gene="MOPS" polyA_signal 7022..7027 /gene="MOPS" polyA_signal 7565..7570 /gene="MOPS" polyA_signal 8205..8210 /gene="MOPS" polyA_signal 8900..8905 /gene="MOPS" polyA_signal 9092..9097 /gene="MOPS" polyA_signal 9303..9309 /gene="MOPS" polyA_signal 9410..9415 /gene="MOPS" BASE COUNT 2236 a 2510 c 2444 g 2293 t ORIGIN 1 tctagagtcg aggctcagag aggaatactt cttccctggt tagcctcgtg cctaggtcca 61 gggtctttgt cctgcctgga tacctatgtg gcaaggggca tagcatttac cccaccatca 121 gctcttagct caaccttatc ttctgggaaa ggctgcgagt gtaaacgcac agcagagact 181 tttcttttgt ccctgtctac ccctgtaact gctactcaga agcatctttc tcacagggca 241 ctggcttctt gcatccagtg tttttttgtc tccctcggcc cccagaataa attcttcttc 301 tgggactcag tggatgtttc acacacgtat cggcctgaca gtcatcctgg agcatctaca 361 caggggccat cacagctgca tgtcagagat gctggcctca catcctcaga caccaggcct 421 agtgctggtc ttcctcagac tggcatcccc agcaggccag taggatcatc ttttagccta 481 cagagttctg aagcctcaga gccccaggtc cctggtcatc ttctctgccc ctgagattta 541 ccaagttgta tgccttctag gtaaggcaaa acttcttacg cccctcctgc tggcctccag 601 gccacactgc tcacctgaat aacctggcag cctgctccct catgcaggga ccacgtctgc 661 tgcacccagc agccatcccg tctccatagc ccatggtatc cctccctgga caggaatgtg 721 tctcctccct ggctgagtct tgctcaagct agaagcactc cgaacagggt tatggggccg 781 ctctcatctc ccaagtggct ggcttatgaa tgtttaatgt acatgtgagt gaacaaattc 841 caattgaacg caacaaatag ttatcgagcc gctgagccgg ggggtggggg ggtgtgagac 901 tggaggcgat ggacggagct gacggcacac acagctcaga tctgtcaagt gagccattgt 961 cagggcttgg ggactggata agtcaggggg tctcctggga agagatggga taggtgagtt 1021 caggaggaga cattgtcaac tggagccatt gtggagaagt gaatttaggg cccaagggtt 1081 ccagtcgcag cctgaggcca ccagactgac atggggagga attcccagag gactctgggg 1141 cagacaagat gagacaccct ttcctttctt tacctaaggg cctccacccg atgtcacctt 1201 ggcccctctg caagccaatt aggccccggt ggcagcagtg ggattagcgt tagtatgata 1261 tctcgcggat gctgaatcag cctctggctt agggagagaa ggtcacttta taagggtctg 1321 gggggggtca gtgcctggag ttgcgctgtg ggagccgtca gtggctgagc tcgccaagca 1381 gccttggtct ctgtctacga agagcccgtg gggcagcctc gagagccgca gccatgaacg 1441 gcacagaggg ccccaatttt tatgtgccct tctccaacgt cacaggcgtg ggtcggagcc 1501 ccttcgagca gccgcagtac tacctggcgg aaccatggca gttctccatg ctggcagcgt 1561 acatgttcct gctcatcgtg ctgggcttcc ccatcaactt cctcacgctc tacgtcaccg 1621 tacagcacaa gaagctgcgc acacccctca actacatcct gctcaacttg gccgtggctg 1681 acctcttcat ggtcttcgga ggattcacca ccaccctcta cacatcactc catggctact 1741 tcgtctttgg gcccacaggc tgtaatctcg agggcttctt tgccacactt ggaggtatga 1801 gcagagagac tggggcgggg gggtgtagca tgggagccaa gggggccacg aaagggcctg 1861 ggagggtctg cagcttactt gagtctcttt aattggtctc atctaaaggc ccagcttatt 1921 cattggcaaa cactgtgacc ctgagctagg ctgctgttga gagcaggcac ggaacattca 1981 tctatctcat cttgagcaat gcaagaaaca tgggttcaga gaggccaagg actcaccgag 2041 gagtcacaga gtgtgggggt gtcctctgag gcagctgagc tggggcacac acagactgag 2101 caccaggagt gagctctagc tttttttttt ctatgtgtct tttctaaaag acacataggt 2161 ttaggactgt ccctggtcca ggtaagaact ggttcagtaa acttgtacat ctcactgcct 2221 ggccagccct gtcagcttcc accagagtgc gtgcactaca cacccggcat ctcaaaggat 2281 tcattcctat ctttcctatc tttggagtga ggcacagtct cacgtagtca gtccagactg 2341 gccttaaatt ctgcagctga ggatgtactt aaacttgtca tcctcctgcc ccagcctctc 2401 aagtgctgtg atcacaggca cggaccacta tgctacgcca ggtgtttcca aacattttct 2461 ctcccttaac tggaaggtca atgaggctct ttcgagaagc aacagagcct gtttagctga 2521 gaaaactgag gcagggagca ggcaaaaatc acatctagag atatgggaga gccaggacca 2581 gagccagggt ctccgggctg ggacctagag atgtttccag tggatacagg aggaaacaga 2641 agtgggtgta gcaaagccca aagccagggt gatgggtggg tcgagcttgc ttatctcccc 2701 gtgtccaggg tactgccttg gtagcactgt tgggcatctc tgttaccttc tgtggtcaca 2761 cacacacaca cacacacaca cacacacaca cacacacata cacacacaca cacccaggtt 2821 ctggatagaa gctggggtac catgccggtg agcttgtctc tgtgggtcag acccaggcca 2881 catctaccat ccaggattct tgttggtagc actcctgtta ttcagaagtt tgttacgtgg 2941 tccttcccca cactgggctt ctgaggctga catatggact aatgtctgga gccccctctt 3001 tacccatctt cttcccctgc taaaacacta gccagggtgt gccctaagcc ccagctccag 3061 gcactccgag gcagtctctc atgagcctaa agctctaacc aaacagaaga gcttctgttt 3121 tggcacacgg gttcttcacc ccatcccttt ctcctcgcca gcccaaactc actgcagtcg 3181 ctaaggcttg gatcaagctc aaaccagaag cttgcatcct agcctgctct ctctgaggtg 3241 aggttagagc tggaggactg acggctacta actgccttac aggtgaaatc gccctgtggt 3301 ccctggtggt cctggccatt gagcgctacg tggtggtctg caagccgatg agcaacttcc 3361 gcttcgggga gaatcacgct atcatgggtg tggtcttcac ctggatcatg gcgttggcct 3421 gtgctgctcc cccactcgtt ggctggtcca ggtaatggca ctgagtatcg ggtctggcaa 3481 ggtctttgtg ggattccttt gaggacacag agccctcgga ttggttccag gcataatgta 3541 acatggtatt gcccccgaaa acatcctggt gactttccca ggctaaggtc taaggtaggg 3601 agaagagagg gactgaatgg tccaatcagt cttattccat gtctgagacc cataacaagg 3661 agaaccctgg acattccaac ccttcacctt ggcgagtccc taatcctcgg ctaacgcaag 3721 gccaaaccac aatcctcttt ggttgagttc ctcgggtggg cctctctctc tcttcctctc 3781 tctctctcac tcaccttgga ccttagcccc tggagagggc tgaaccttcg gaaaatgcat 3841 ggtgacattg tagcccagga actgggtccc atccagctcc aggcgaccat atctaaatga 3901 gacaagagaa ggttgggaca gtggtttgga cacctagaca ggctatgagg tacacagagc 3961 ctcagagact ctccattctc tgtcctcatg tcctccccac cccgggagcc acccagtggc 4021 cctcactgag tcagagcccc tcactcctca ctggcctctt tcctcatcct cacccacctg 4081 gcttggcagg cctctacaga cacactcagt ggacacttgg gtttctgagt gtggcccagt 4141 gtcaccgtcc tcagatatca tcacaacatc cttgtttcta gaagctgcac acagccctga 4201 tgccagcagc gagcccacct ttactgtaga gagcattgcc gttactagga gatcccatgc 4261 acaaaggcat tcccagggaa ggcctcagag aatgctcctc tctccagcat tctctgccta 4321 ctcccttaac caccgaagca gggcagcagg ctagtggagc agagctgcgt ggtcaagtgg 4381 cagggagctt aagaatcgtc caagggcgga gcaagtaagt ctcattaggt gatggggcca 4441 gcaggtaaaa gtccattcat gcttatgtcc agtctggggc tgtgttctct tgcctgtttt 4501 atcatccctt gcgctgacca tcaggtacat ccctgagggc atgcaatgtt catgcgggat 4561 tgactactac acactcaagc ctgaggtcaa caacgaatcc tttgtcatct acatgttcgt 4621 ggtccacttc accattccta tgatcgtcat cttcttctgc tatgggcagc tggtcttcac 4681 agtcaaggag gtatgagcag gggggccgcc cagcctcgtg ccgggtgggt ggcagagcca 4741 ggtgggcaga gctgggtgcc agggttcgta cagcacgatg ggctaacaca ggtctgtgtc 4801 cctgcaggcg gctgcccagc agcaggagtc agccaccact cagaaggcag agaaggaagt 4861 cacccgcatg gttatcatca tggtcatctt cttcctgatc tgctggcttc cctacgccag 4921 tgtggccttc tacatcttca cccaccaggg ctccaacttc ggccccatct tcatgactct 4981 gccagctttc tttgctaaga gctcttccat ctataacccg gtcatctaca tcatgttgaa 5041 caagcaggtg cctgggctga ggcaggggct gtggagagtg agggagagaa ggggaggggg 5101 agaatgggac aggggaggca ttgcactcag actgctggca gcccgtgagc tctcaggctg 5161 gcgaaccccc aagctcttgg agtaagtctt ccgggtgacc tgccgtccac tcctgtgaga 5221 tacagccgac caaatggttc tggaagtctg ctttagaagt aggctagaag tcaggtgcaa 5281 tagtgcaaat ttgtaatctt aattctgagg caggaggatc ttgagctcca ggtcagcctg 5341 gctaaacagt ggatgtgtgt ccccctctcc ccaaagcagg ctgtgaagca cactgctata 5401 tcccagcatt caggagactg aagtaggtcg attagaaatt caaagctatc tttggccata 5461 cagtgatttg ggagccaacc tgggctacaa tgagaatctg tctcaagaag caaccagaaa 5521 tatcaagtag ttccaagtct gggaatagaa tggtctcact gtaaagctga agaaattgct 5581 agaaatgcta cttgtaggaa gtcagggatt acaccactgt caaacgccac agtctctctg 5641 cagaaaagga tgtggtctct ggaacctaga ctctgggttc aagttctagt tctgtcccat 5701 ttaagctgtg tgaccttggg tgagtcagat atctccccat gtggacttcg gttttcctat 5761 ttataggaag ggccaaatca taaactctca aatcaattga gatcactcac ggaaggccct 5821 acgcatccac aggacacatg gaatgccact tgacaatacc ccttgtgcta tctgtgtacc 5881 tggcgtctct ggttgaaggg caacatacat ttagcaagct cccccagggc acaggcttag 5941 tgaggggaca tgctggaggt gaggctgaag ctgggcaggt ggtagggcct gtcctgactg 6001 gagcctctgc ccttccagtt ccggaactgt atgctcacca cgctgtgctg cggcaagaat 6061 ccactgggag atgacgacgc ctctgccacc gcttccaaga cggagaccag ccaggtggct 6121 ccagcctaag cctggccaga gactgtggct tgaaagtagg agtctcctgt ccccacacac 6181 cccagccaca gcccccacca ggagcagcac cgttgggatg aggtcatgca ggctccctca 6241 gtgttctttt ctttgttttt aatgaattca tgaaagcaaa atgaggctcc ccactcaatg 6301 gggacagctt gacaaaggac atccatccac caagaccacc ctcaacctgg agtccccaat 6361 tcccgggggg ccagcgggat ctgtacccct ccctcagctt gtctatcagg aacatgacaa 6421 gtgtcccggc ttagggctaa atgtctagga cagaatggaa cacatagtag ctgattaata 6481 aatgctagct ggatgaaggg aggaatgagt gactgactga gtggatatat gagtgaaggg 6541 attaatggaa gggaacatgg atgtcctcag gtgcccaacc tggcagatcc agtcatgtct 6601 ggctggaatc tataagcagt tttacatacc tgccctggtt tcctctgccc ccacccccac 6661 cccagttgga tctcccaaat ccggggccct gatagaatat ggctgcttca aagacagaga 6721 gatgagggga gggagggggg agggagagag ggagggaggg agacacagag agggaatatg 6781 ggtggtgcgt gtgtgtgtgt gtgtataaac actttgtata taaagagtac agctggtagt 6841 tatgttacaa gtaacaccga ctaatataat taattaacca tcctaatggt ctctgcttgt 6901 tagtgactgc ttgggaatta ggcagggcca agcactcaga taaggtattt ccctcagcct 6961 tagtaggctt ttgcaaatga cccaggcctt cactggtgca gggctagagc tggattacag 7021 agataaatga cagtgacagc aacgtgagct gcagccctta gggactgaga aagcatcgag 7081 accaggggtc tccggcaagg cctaggtcct cccttcagta tggaaacctt gcctcatgtc 7141 tctcagcctc cttggcctgt ggagatccag cccttcctct tggcttctgg atacatttgc 7201 tcttctacac cagcaaccaa gtggcaacag ttccaggcca gtatggagtt ttagaagcca 7261 tgccaatatg cccaccttca gggagcagct gagtccttga tgccaccctt gttctgaaga 7321 gttcagaaac acagtgcaag acatgaccag gcctcatcct taggagtttc atggatccag 7381 ttcttagctc ccttgttgga tatgctgttt tccttggcct ttggtctttt ctttatccca 7441 gaggttttgg cttaaggaac acggaactat ggggtacaga attgagcagc ctcagtctgc 7501 atccctcctc tatagaacca cagctgggcc ctcagcaggc ccaactctgc atggggacag 7561 aggcattaaa agctcagctc ctatacttgg tggcagtggt ggtctgttgc tctcaagctc 7621 tttcaaaatg gatggaaact gggacacttc cctgacccct ggttatggaa gactagactg 7681 tgtggggaca aacagtccag agtccctggg gaatgtgatg agcagctcca tcatttttag 7741 aaatccaatt tgaggcagta tagagagatg gtgacctcta taagcctctg tatctgcaaa 7801 gaggagctta gacctgccct tgagggatta tatgagattt aagggactta tgtggccagc 7861 ctacttcctg gcatgctgaa gacattggca cactctggta ttctagacct tggctcagag 7921 ctgcctttac taggatactg tcacttagca aaagaatggg atggagcctc agatgtggag 7981 tgacaccatc ttccaagaag gaaagggtgc cagggtctgg gatgaaagcc ctttggtgct 8041 atgttgggca agggcgagtg ccagcaaggg gttatttgct tgctctctcc atcagtgatg 8101 aggttccatt tggtcacaag aaattcaccc caattgctga aacagaggct gactattggc 8161 ttataagcat gaaaccccac tcccctccac ttcaggctgg ctagattaaa agctcagacc 8221 tgtgacctct tgtgtctctc ttctgtgttg acttcactca caggcctaac ctcagaggtg 8281 tctgtagcag tcccagggcc agacaccctt ccagaaaggg gctttccttt cctttataat 8341 catggtgaca ggtcagattc ttattggcag acctaagtta cctgattatc cttaagccaa 8401 tcatcatgtc taagacagag attcatttga ttggccaggg ctgagtcact tgtttacctc 8461 taagtcaatc aacaggcctg agatggagag tcatcttctg attagctaga cctgggtcac 8521 ctgatcacct ctaagccaac cactatgtct gatatagggc tccctcattt gtaatgtgtt 8581 cccacactac aagataaagt tgactccaca tagtttaagg agcctgtagg atgtgttccc 8641 caaaagcaaa caggggaaca ggatcaggac cagccctgag gggtggggac tgggatgtgc 8701 tagacaaggc tccggggtgt catggatgaa gggattccat ggctgccaca cctctggttg 8761 tctctcatgc tttatgggca ggagtgcctg ttggaaggct actttagctg cctggccttg 8821 acctacctca ctcctccatg cccagttcac ttgtcctgtg gggtgtcatc tttactcctg 8881 ccttctccgt gcccgggaaa aataaccctt tagaaccaga atgctcttgt cagcctccct 8941 cgacagtcac tgtgagtgta gacagaagag ctcctgccat gagctgggac ctgtagtccc 9001 cacagggtca cctgccaggc tccaagcaag cagcctttgt ggaacataca acacactcag 9061 ccaatcacag gtcagacagg gctgtcaccc caataaagag acacctgggt taccaggtaa 9121 cctgaggtgc cccagagaaa cacagtgcca gtcccagggt aagtccctag actacacagg 9181 ccacggctct gagctgaaag tgagagacac cttagctggt ggaggcttta tttctgtatt 9241 tgtttccacc cacggtcact ttacctctga gaaacattga gggtgacccc agatatatag 9301 ggaattaaat aggaacacaa gtcaaacatc tactgataat cataaagaaa cctaatgtga 9361 agtaagtctt tgatatatat atgcaatttt acaattgatt aaagatgaaa ataaatttgc 9421 attctaatga gatggatctg cttgcttttt cacaaggaat gatccgttga cctgcaggtc 9481 gac //