[bionet.molbio.genbank.updates] Astyanax fasciatus red visual pigment gene

GenBank-Updates@genbank.bio.net (01/10/91)

LOCUS       ASYPIGR1      113 bp ds-DNA             VRT       10-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 1.
ACCESSION   M38625
KEYWORDS    visual pigment.
SEGMENT     1 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; .
REFERENCE   1  (bases 1 to 113)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (sites)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_review
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
FEATURES             Location/Qualifiers
BASE COUNT       33 a     31 c     36 g     13 t
ORIGIN      
        1 atgggcgacc agtggggaga tgctgttttc gcagccaggc gacggggcga cgacacgacg
       61 cgagaggcag ctttcaccta caccaacagc aacaacacga aaggtaagaa ccg
//

GenBank-Updates@genbank.bio.net (01/10/91)

LOCUS       ASYPIGR2      317 bp ds-DNA             VRT       10-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 2.
ACCESSION   M38626
KEYWORDS    visual pigment.
SEGMENT     2 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; .
REFERENCE   1  (bases 1 to 317)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 317)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   3  (sites)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_review
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.Draft entry and computer-readable
            sequence for [Proc. Natl. Acad. Sci. U.S.A. (1990) In press] kindly
            submitted
            by S.Yokoyama, 18-SEP-1990.
FEATURES             Location/Qualifiers
     intron          order(M38625:104..113,1..10)
                     /note="113 bp gap."
                     /number=1
                     /gene="R007"
     exon            11..307
                     /number=2
                     /gene="R007"
                     /codon_start=11
BASE COUNT       68 a     88 c     75 g     86 t
ORIGIN      
        1 tctaccgcag atccctttga gggacccaat taccacattg ccccaagatg ggtgtacaat
       61 ctggctacat gctggatgtt ctttgtggtc gtcgcctcaa ccgtgaccaa cggcctggtg
      121 ctggtggcct cagccaaatt caagaaactg cgtcaccctc tgaactggat cctggtgaat
      181 ctcgctatag ctgatctgtt agagacacta ttggccagca ccatcagcgt ctgcaaccag
      241 ttcttcggct acttcatcct cggacatcca atgtgtgtat ttgaaggctt tacagttgct
      301 acctgtggtg agtaccg
//

GenBank-Updates@genbank.bio.net (01/10/91)

LOCUS       ASYPIGR3      189 bp ds-DNA             VRT       10-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 3.
ACCESSION   M38627
KEYWORDS    visual pigment.
SEGMENT     3 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; .
REFERENCE   1  (bases 1 to 189)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 189)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   3  (sites)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_review
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.Draft entry and computer-readable
            sequence for [Proc. Natl. Acad. Sci. U.S.A. (1990) In press] kindly
            submitted
            by S.Yokoyama, 18-SEP-1990.
FEATURES             Location/Qualifiers
     intron          order(M38626:308..317,1..10)
                     /note="1.0 kb gap"
                     /gene="R007"
     exon            11..179
                     /number=3
                     /gene="R007"
                     /codon_start=11
BASE COUNT       36 a     36 c     59 g     58 t
ORIGIN      
        1 cgttcatcag gtattgctgg cctgtggtct ctgactgtta tctcatggga gagatgggtg
       61 gtggtgtgca agccttttgg aaatgtgaag tttgacggga aaatggcaac tgctggaatt
      121 gtcttcacct gggtctggtc tgcagtctgg tgcgcacctc ccatctttgg atggagcagg
      181 taataactt
//

GenBank-Updates@genbank.bio.net (01/10/91)

LOCUS       ASYPIGR4      186 bp ds-DNA             VRT       10-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 4.
ACCESSION   M38628
KEYWORDS    visual pigment.
SEGMENT     4 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; .
REFERENCE   1  (bases 1 to 186)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 186)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   3  (sites)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_review
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.Draft entry and computer-readable
            sequence for [Proc. Natl. Acad. Sci. U.S.A. (1990) In press] kindly
            submitted
            by S.Yokoyama, 18-SEP-1990.
FEATURES             Location/Qualifiers
     intron          order(M38627:180..189,1..10)
                     /note="96 bp gap"
                     /number=3
                     /gene="R007"
     exon            11..176
                     /number=4
                     /gene="R007"
                     /codon_start=11
BASE COUNT       33 a     48 c     46 g     59 t
ORIGIN      
        1 ttcctgacag gtactggcct cacggtctga agacctcctg tggacctgat gtgttcagtg
       61 gaagcgaaga ccctggagtt cagtcctaca tgattgttct gatgatcacc tgctgcttta
      121 ttcccctggg cattatcatt ctctgctaca tcgctgtgtg gtgggccatt cgcactgtaa
      181 gttttc
//

GenBank-Updates@genbank.bio.net (01/10/91)

LOCUS       ASYPIGR5      260 bp ds-DNA             VRT       10-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 5.
ACCESSION   M38629
KEYWORDS    visual pigment.
SEGMENT     5 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; .
REFERENCE   1  (bases 1 to 260)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 260)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   3  (sites)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_review
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.Draft entry and computer-readable
            sequence for [Proc. Natl. Acad. Sci. U.S.A. (1990) In press] kindly
            submitted
            by S.Yokoyama, 18-SEP-1990.
FEATURES             Location/Qualifiers
     intron          order(M38628:177..186,1..10)
                     /note="116 bp gap"
                     /number=4
                     /gene="R007"
     exon            11..250
                     /number=5
                     /gene="R007"
                     /codon_start=11
BASE COUNT       63 a     76 c     59 g     62 t
ORIGIN      
        1 attccaacag gtcgctcagc agcagaaaga ctcagaatca acacagaaag cagagaagga
       61 agtgtccagg atggtggtgg tcatgatcat ggcttattgc ttctgctggg gtccttacac
      121 tttctttgcc tgctttgcgg cggctaaccc cggctacgcc ttccatccac tagcagcagc
      181 catgcctgcc tacttcgcca agagcgccac catctacaac cccgtcatct acgtcttcat
      241 gaacagacaa gtaggttttt
//

GenBank-Updates@genbank.bio.net (01/10/91)

LOCUS       ASYPIGR6       60 bp ds-DNA             VRT       10-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 6.
ACCESSION   M38630
KEYWORDS    visual pigment.
SEGMENT     6 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; .
REFERENCE   1  (bases 1 to 60)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 60)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   3  (sites)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_review
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.Draft entry and computer-readable
            sequence for [Proc. Natl. Acad. Sci. U.S.A. (1990) In press] kindly
            submitted
            by S.Yokoyama, 18-SEP-1990.
FEATURES             Location/Qualifiers
     intron          order(M38629:251..260,1..10)
                     /note="814 bp gap"
                     /gene="R007"
     CDS             join(M38625:1..103,M38626:11..307,
                     M38627:11..179,M38628:11..176,M38629:11..250,
                     11..60)
                     /gene="R007"
                     /partial
                     /product="red visual pigment"
BASE COUNT       12 a     11 c     19 g     18 t
ORIGIN      
        1 ctgtttgcag ttccgcgtat gcatcatgca gctctttggg aagaaggtgg atgatggatc
//

GenBank-Updates@genbank.bio.net (01/12/91)

LOCUS       ASYPIGR1      113 bp ds-DNA             VRT       12-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 1.
ACCESSION   M38625
KEYWORDS    visual pigment.
SEGMENT     1 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM  Astyanax fasciatus
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; Characidae.
REFERENCE   1  (bases 1 to 113)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_entry
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            
FEATURES             Location/Qualifiers
BASE COUNT       33 a     31 c     36 g     13 t
ORIGIN
        1 atgggcgacc agtggggaga tgctgttttc gcagccaggc gacggggcga cgacacgacg
       61 cgagaggcag ctttcaccta caccaacagc aacaacacga aaggtaagaa ccg
//

GenBank-Updates@genbank.bio.net (01/12/91)

LOCUS       ASYPIGR2      317 bp ds-DNA             VRT       12-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 2.
ACCESSION   M38626
KEYWORDS    visual pigment.
SEGMENT     2 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM  Astyanax fasciatus
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; Characidae.
REFERENCE   1  (bases 1 to 317)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 317)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_entry
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            
FEATURES             Location/Qualifiers
     intron          order(M38625:104..113,1..10)
                     /note="113 bp gap."
                     /number=1
                     /gene="R007"
     exon            11..307
                     /number=2
                     /gene="R007"
                     /codon_start=11
BASE COUNT       68 a     88 c     75 g     86 t
ORIGIN
        1 tctaccgcag atccctttga gggacccaat taccacattg ccccaagatg ggtgtacaat
       61 ctggctacat gctggatgtt ctttgtggtc gtcgcctcaa ccgtgaccaa cggcctggtg
      121 ctggtggcct cagccaaatt caagaaactg cgtcaccctc tgaactggat cctggtgaat
      181 ctcgctatag ctgatctgtt agagacacta ttggccagca ccatcagcgt ctgcaaccag
      241 ttcttcggct acttcatcct cggacatcca atgtgtgtat ttgaaggctt tacagttgct
      301 acctgtggtg agtaccg
//

GenBank-Updates@genbank.bio.net (01/12/91)

LOCUS       ASYPIGR3      189 bp ds-DNA             VRT       12-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 3.
ACCESSION   M38627
KEYWORDS    visual pigment.
SEGMENT     3 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM  Astyanax fasciatus
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; Characidae.
REFERENCE   1  (bases 1 to 189)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 189)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_entry
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            
FEATURES             Location/Qualifiers
     intron          order(M38626:308..317,1..10)
                     /note="1.0 kb gap"
                     /gene="R007"
     exon            11..179
                     /number=3
                     /gene="R007"
                     /codon_start=11
BASE COUNT       36 a     36 c     59 g     58 t
ORIGIN
        1 cgttcatcag gtattgctgg cctgtggtct ctgactgtta tctcatggga gagatgggtg
       61 gtggtgtgca agccttttgg aaatgtgaag tttgacggga aaatggcaac tgctggaatt
      121 gtcttcacct gggtctggtc tgcagtctgg tgcgcacctc ccatctttgg atggagcagg
      181 taataactt
//

GenBank-Updates@genbank.bio.net (01/12/91)

LOCUS       ASYPIGR4      186 bp ds-DNA             VRT       12-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 4.
ACCESSION   M38628
KEYWORDS    visual pigment.
SEGMENT     4 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM  Astyanax fasciatus
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; Characidae.
REFERENCE   1  (bases 1 to 186)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 186)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_entry
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            
FEATURES             Location/Qualifiers
     intron          order(M38627:180..189,1..10)
                     /note="96 bp gap"
                     /number=3
                     /gene="R007"
     exon            11..176
                     /number=4
                     /gene="R007"
                     /codon_start=11
BASE COUNT       33 a     48 c     46 g     59 t
ORIGIN
        1 ttcctgacag gtactggcct cacggtctga agacctcctg tggacctgat gtgttcagtg
       61 gaagcgaaga ccctggagtt cagtcctaca tgattgttct gatgatcacc tgctgcttta
      121 ttcccctggg cattatcatt ctctgctaca tcgctgtgtg gtgggccatt cgcactgtaa
      181 gttttc
//

GenBank-Updates@genbank.bio.net (01/12/91)

LOCUS       ASYPIGR5      260 bp ds-DNA             VRT       12-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 5.
ACCESSION   M38629
KEYWORDS    visual pigment.
SEGMENT     5 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM  Astyanax fasciatus
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; Characidae.
REFERENCE   1  (bases 1 to 260)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 260)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_entry
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            
FEATURES             Location/Qualifiers
     intron          order(M38628:177..186,1..10)
                     /note="116 bp gap"
                     /number=4
                     /gene="R007"
     exon            11..250
                     /number=5
                     /gene="R007"
                     /codon_start=11
BASE COUNT       63 a     76 c     59 g     62 t
ORIGIN
        1 attccaacag gtcgctcagc agcagaaaga ctcagaatca acacagaaag cagagaagga
       61 agtgtccagg atggtggtgg tcatgatcat ggcttattgc ttctgctggg gtccttacac
      121 tttctttgcc tgctttgcgg cggctaaccc cggctacgcc ttccatccac tagcagcagc
      181 catgcctgcc tacttcgcca agagcgccac catctacaac cccgtcatct acgtcttcat
      241 gaacagacaa gtaggttttt
//

GenBank-Updates@genbank.bio.net (01/12/91)

LOCUS       ASYPIGR6       60 bp ds-DNA             VRT       12-JAN-1991
DEFINITION  Astyanax fasciatus red visual pigment gene (R007), exon 6.
ACCESSION   M38630
KEYWORDS    visual pigment.
SEGMENT     6 of 6
SOURCE      Astyanax fasciatus DNA, clone lambda R007.
  ORGANISM  Astyanax fasciatus
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Characoidei; Characidae.
REFERENCE   1  (bases 1 to 60)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Concergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatu, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1990) In press
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 60)
  AUTHORS   Yokoyama,R. and Yokoyama,S.
  TITLE     Convergent evolution of the red- and green-like visual pigment
            genes in fish, Astyanax fasciatus, and human
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 9315-9318 (1990)
  STANDARD  full staff_entry
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by S.Yokoyama, 18-SEP-1990.
            
            
FEATURES             Location/Qualifiers
     intron          order(M38629:251..260,1..10)
                     /note="814 bp gap"
                     /gene="R007"
     CDS             join(M38625:1..103,M38626:11..307,
                     M38627:11..179,M38628:11..176,M38629:11..250,
                     11..60)
                     /gene="R007"
                     /partial
                     /product="red visual pigment"
BASE COUNT       12 a     11 c     19 g     18 t
ORIGIN
        1 ctgtttgcag ttccgcgtat gcatcatgca gctctttggg aagaaggtgg atgatggatc
//