GenBank-Updates@genbank.bio.net (01/12/91)
LOCUS RABTNFBA 3567 bp ds-DNA MAM 12-JAN-1991 DEFINITION Rabbit tumor necrosis factor-beta gene, complete cds. ACCESSION M60341 M35327 KEYWORDS lymphotoxin; tumor necrosis factor-beta. SOURCE Rabbit DNA. ORGANISM Oryctolagus cuniculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Lagomorpha; Leporidae. REFERENCE 1 (bases 1 to 3567) AUTHORS Shakhov,A., Kuprash,D., Azizov,M., Jongeneel,C. and Nedospasov,S. TITLE Structural analysis of the rabbit TNF locus, containing the genes encoding TNF-beta (lymphotoxin) and TNF-alpha (tumor necrosis factor) JOURNAL Gene 95, 215-221 (1990) STANDARD full staff_entry FEATURES Location/Qualifiers CDS join(1168..1242,1326..1431, 1629..2041) /gene="TNF-beta" /product="tumor necrosis factor" mRNA join(718..866,1159..1242, 1326..1431,1629..2639) /gene="TNF-beta" /product="tumor necrosis factor" misc_feature 611..620 /note="NF-kB-related site" protein_bind 643..648 /note="Sp1" TATA_signal 688..693 /note="pot." /gene="TNF-beta" exon 718..866 /number=1 /gene="TNF-beta" /codon_start=718 intron 867..1158 /number=1 /gene="TNF-beta" exon 1159..1242 /number=2 /gene="TNF-beta" /codon_start=1159 intron 1243..1325 /number=2 /gene="TNF-beta" exon 1326..1431 /number=3 /gene="TNF-beta" /codon_start=1326 intron 1432..1628 /number=3 /gene="TNF-beta" exon 1629..2639 /number=4 /gene="TNF-beta" /codon_start=1629 misc_feature 2400..2411 /note="ttatttat element" misc_feature 2917..2926 /note="NF-kB-related site" misc_feature 3029..3038 /note="NF-kB-related site" BASE COUNT 665 a 1204 c 1029 g 669 t ORIGIN 1 aagcttgtac tacagatcac acagcagtgg ccccagcact gaccctggag ggggtgtttc 61 cacgggatac agaaatctga tgtggggggg ctgaggctgg agtgaggggg caggcactgt 121 tcagggtggg acgggagctt gtcatccaag agcatgtagc atcatcttgg cacgggggtg 181 attcatcttc caagccagga cacttgggga gggagagggg gctcctttcc ccaaggcagc 241 aggtacacag ccctgatttg agacctgcca gacagcctgg aaagtgcaca cactgggacg 301 agcaaagacg agggccaggg ctgcccgaga aggaagctgg tggggtgcag aggtgttcac 361 tgcgctggct gttcagggaa ctggcctgca gcccacaccc aggctgctgc cgctcgtcct 421 ccccgaaacg cctgtccctt ctctggaact gctgggcctg ccctccctcc gcggccgtcc 481 cagcccacgg ttcccctgac cccactcgcc ttcccagaac tcaatcgccc gagcccccag 541 cctgtggttc cctcctaggc cccagccttt cctgccttcg actgaaacag cagcatcttc 601 tgagccctgg gggcttcccc gggccccagc cccgacctag aacccgcccg ccgcctgcca 661 cgctgccgct gccactgccg cttcctctat aaagggaccc aagcgtccgg gcccaggggc 721 cccgcacagc aggtgagagt cttctgccca gctgcctggc tgccgcacag cctcctgccc 781 cctccgcccg ggcacaggcc ggcgccacct gcctggcacc ccgcgcctcc cctccccgcc 841 ccccacctgc ctgggcctgg gccttggtgg gtttgctttt ggtttgttct tgtgtctgcc 901 tctccagctg tgcgtcatcc ctgtcacggg ctctctgttt ctgccacctt cctgtctgtc 961 tctttctctt tctctcctgt tcacctcggg gctcccctgc ctgcatctcc tcctcttctc 1021 tctctgtcgc cctgtcgttg gggtggctgt ctcggtgggc gggcgggcgg gcgggaggtc 1081 cctcttccgc tgcgtgcccc gccccaccca ccgtctctca ctccgcgggg cgcgctctct 1141 ttctctctct ccctgcaggt tctccccatg acaccacctg gacgtctcta cctccccctc 1201 cttctggggc tgctgctggc cccgccgccg cctggggccc aggtgaggcc gcaggagaat 1261 ggggagctgc cggggtgcgc ccaaccttga gcctcgcagc tcccctcaac tctgttctcc 1321 cctaggggct ccctggggct gagttcccgc cctcagctgc ccggaatgcc cagcagcgcc 1381 ttcagaaaca tttcggccac agcaccctca aacctgctgc gcacctcgtt ggtaaacacc 1441 caccgggccc cagacacaca gccccctggc tctcctgcta cagccccacc agggtccaag 1501 tacaacccac acccctcctc caagtcctcc cccactagca cctcccccag ccctcacctg 1561 agctcagctg tccagtgctg ctccctcagg ggctgacact ctaacctgcc cttccctccc 1621 caccccagga gaccccagcg cgcaggactc gctgcgctgg agagcgaaca cggatcgggc 1681 cttcctccgc cacggcttct ccctgagcaa caattccctg ctggtgccca gcagcgggct 1741 ctacttcgtg tactcgcagg tggttttctc tggggaaggc tgctccccca aggccgtgcc 1801 cacgcctctc tacctggctc acgaggtcca gctcttctcc tcccagtact ccttccatgt 1861 gcctctcctc agcgcccaga agtctgtgtg cccagggccg cagggaccct gggtgcgctc 1921 cgtgtaccag ggggccgtgt tcctgctcac ccagggagac cagctgtcca cccacacaga 1981 tggcatcgcc cacctgctcc tcagccccag tagtgtcttc tttggagcct ttgctctgta 2041 gaccttagaa aaatccagaa agaaaaaaaa atgggcttca aggccttctc cccattttga 2101 ctccattctg actgtttcaa ggatcaccac cacctctcct tggaccattc caacagtctc 2161 aagtctcccc cactcaagtc acctggagtc ttcaaagaag gaattctagg ccccccaggg 2221 gaccgcaccc ccctgaatcc aggatgtcac gcctgcctag aaattcagag ccggagctgt 2281 cctgctgttc cccactgtct aggtggggcc tgcgcctgga ccggaccggg acacagggca 2341 gcttgggagg aagactagag gcagggaagg gggactattt atgaaggggg ggaattaagt 2401 tatttattta tggagcatgg agagagggga ataacacaag gatgtcagga gagagagagt 2461 gttgaacagg ctcaagagct aaagacaagg cacttggaca aggctcagag agagagagag 2521 agaggtctga ggaactgggg ggctcgagaa ggaagcgaaa gggccgctga gccagcaccg 2581 cttgaccaga cacccccggg gagacacctg cgccctcgcc ctcagtgaag cccaataaac 2641 ctcttttctc tgaagtgctg tctgctcgtg tgtcggtctc taactctggg aggggagaat 2701 tccccaggtc tctctacgga atggagagag ggacgggggc cacagagggg tcgggaactg 2761 tgggcagagg tccaggagat aaaaagcccc caaggagctc caggggtgtg tggccgactc 2821 ccaggggaga ggagccaaag tgctgcacgg gaaccaaagg atgagctggg aagactggag 2881 agatggggtc cccggggtct tggggggtgg gagtcagggg gtccccggga gacctctcct 2941 agaggcttga gggagggggt cacagggggc ctctggggag aagggaccac acaaagggag 3001 ggctgtccca gatggtgagg gtgcagatgg agaccccctg aggaggagct ttgcacagga 3061 ccccaaggag caaccagggg gtgtggaaca cagcagactt tctggacacg cagccgcata 3121 acagggcttg gaagggaggg gtggattcat gaaaaaaaat cagggacctc agagtccctt 3181 ggaaatcaag attgaaaccg tagtggggat ccgggttcag aatgaaagga gaagcctgcc 3241 ctgtggggcc gtgaattccc agggctgatt tccctccctc tggggctgtc ccaggcttgt 3301 ccctgctatc ctccacccag ccctgccagg gccccatgca caccccatgc acccagcccc 3361 cagcgccttt tgcccccccg gggacccaga cacctgtctc agacccagca ccgcccaggt 3421 ttctcccgct caaggtctca gccttctgaa gcccctccta cttcaagttc taccccccac 3481 aggagtcctg tctggaaatc agagggaaac agcacaccca tcggtccccc aaagtaggcg 3541 tggtgggggc aggggcaacc aggatcc //