GenBank-Updates@genbank.bio.net (01/16/91)
LOCUS DRFJOCKEY 4997 bp ds-DNA INV 16-JAN-1991
DEFINITION Drosophila funebris jockey repetitive element encoding 2 ORFs,
complete cds.
ACCESSION M38437
KEYWORDS LINE repetitive sequence; jockey repetitive sequence.
SOURCE D.funebris DNA.
ORGANISM Drosophila funebris
Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
Cyclorrhapha; Schizophora; Drosophiloidea; Drosophilidae.
REFERENCE 1 (bases 1 to 4997)
AUTHORS Mizrokhi,L.J. and Mazo,A.M.
TITLE Evidence for horizontal transmission of the mobile element jockey
between distant Drosophila species
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 9216-9220 (1990)
STANDARD simple staff_entry
COMMENT Draft entry and computer-readable sequence for [Proc. Natl. Acad.
Sci. U.S.A. (1990) In press] kindly submitted
by A.M.Mazo, 13-SEP-1990.
FEATURES Location/Qualifiers
CDS 319..2043
/note="ORF1"
/codon_start=319
CDS 2040..4790
/note="ORF2"
/codon_start=2040
BASE COUNT 1424 a 1232 c 1157 g 1184 t
ORIGIN
1 cagtctctgt ccagcattca ttgcagtcgg acgtacgcgc tttgtaaagt gaaacaacaa
61 caacaacaac tcaactcaac tctttcgcgg tgtgccaagt taggctcgtg atctattttt
121 agctactgct gagcggtggc ggcagcttat tacggtactt gccatcgtta agccagtctt
181 aagcgcagct tcgtttgccc ctgcccgctt tgcgcaagcg agaggttgat accgttctaa
241 tttcccttat ctacattttg atctggtgaa gttgtttaca attgcctatt taactattaa
301 atagaaacaa ttgtaattat gaattatgga aactcatcga ctcgctcgct acctagtgat
361 aggagtgcaa agcttgagga gatgaggaaa atagctggtg ctgaccctgc aactatacgc
421 tcccaaatta tagctagcgg tgcgtcaacg tctaaccaag ctgcgagttt attggcgaac
481 tctgcgttca attacccatc ggtaacgact agcagtgata ccagctttac ctgcactgtc
541 actacgtctc aagcaagctg tgcatctaca tcaacgtaca ctgtggcggc acgtgtgggg
601 ccgaacatct gctcaactac gccggttggt aacaattcgg tgagtgatac aatggctcaa
661 atggctggaa aggctgctcg taagggaaag tgctcgtttc aagcacctgg tctatctagt
721 agcaagaaac gcaaagtagt tgtgaatgct tgccaaacca ttcgcaaagt aaagatgcag
781 gcgactgacc tacgcaaggc gacacctaaa gttgctacag cctcggcgac agcaacgacc
841 atgagcaaca accgctttgc agcactagct ttagaagcgg ataacgttat ggagcaagac
901 ttggcagaaa attgctcgaa cggagaagaa gatgtaccgg ttgtcaacat gaacaggcaa
961 tcaacaaatg gtccatcaaa gcctccagct atatgcgttc caaatgttga caatccccac
1021 tcattggaac aggcattaaa ttcgtgcgtc ggtgacaata gttacagtat tcgtacctcc
1081 aaattcggtg tgtcccgaat atacactatc aacgccgatg ctttccgtgc agtggtgaaa
1141 cacttaacat cgttgaactg tcaattctgg catcaccagc ttagggaaga taagccttat
1201 actgtcgcag tcaagggaat gcacgctaac gtgcccaagg cacaaatcga gcatgctttt
1261 gctgaccacg gtttcgaagc cctcaacata tattgcccga gaaaggctga ttggcgcaat
1321 gcccaggtta gcgaggatga cgatgaagcg accgttaatt tcaagacaag gcaaaatatg
1381 tttttcgtca acctcaaaca aggaccgaag atcgctgaag cgttgaaaat aactcaacta
1441 ggcagataca gagtcactgt ggagcgtgct cctcgcagaa gagaggtgct acagtgcctg
1501 agatgtcaca tttttggaca ttctaaaaat tattgtgtcc gggaccccat atgcgcaaag
1561 tgcgctggct ctcatatgac tggctcgcta ctttgcacca gtgacatttg tatgtgtgtc
1621 aactgtggtg gagatcatgc ctcgactgat aaagactgcc cagtcaggat tgaaaaatta
1681 aggaaaatga agccgagccc gaggctccct gttcctgaca acgcaaccaa taataaacat
1741 aatcgtgcct cttcagcacg cggctttatc cccgctgaag ctgtcagagg caatatgtcg
1801 tacgctgaca ttgttcgacc taaaggatct caatttagag caactgctac tattaattcc
1861 cagcatgagt caaatccact gcatgactta ggatctggca ataagttcct gacgttggaa
1921 aaatccatta gagagatcaa cggcagaatg gaccaactat tcaaacttgt gcaggagact
1981 gtggaagcaa acaaggcttt ccgagaactg gtccaggttc tcatctcacg gatgcctaaa
2041 tgactcaacc aaccataaaa atcggattgt ggatgcaccg aggactaact aggggctctg
2101 aagagcttcg gctttttctc agtgtacata atatagatgt catgcttgtc actgagtcac
2161 acatgcggga gggtcagcgg atctttctac ctggatattc cacgtatcac gtcttccatc
2221 ccagcggtaa cagcagaggt ggggcctcag tcattgtgcg ctctagcatt agccacagtc
2281 cccagcctcc catctctacc aacgacaggc agatagcata cattcagctg cagacagcgg
2341 aggggcctgt tgttctcgcg gctgtgtatc tcccacctag agagcgatgg atacgagctg
2401 aatttgagtc gctatttgcc gtgctaggca acaaattcat tgcaggagga gactacaatg
2461 ccaagcacgc atggtggggc aactcaagag cctgtgcaag aggcaaggta ttgcaggaag
2521 tcgttgcgaa tggacagtac caaattttag caactggaga gccgaccttc tactcctaca
2581 atcctctagt atctccgtct gcgctagact tctttgtcgt caatgggtac gacatgagaa
2641 ggcttaatgt acaaacgctt catgagcttt catcagacca cactcctctt ctggctgatt
2701 tgcatgcaat gccgataaac aagcccccac gctcctgctt actcgctcga ggtgctgata
2761 tagagagatt caaggcttat ctgacgcaac atatcgacct aagtgtaggt attcaaggaa
2821 cagacgatat tgataacgcc atcgacagct ttatggatat cctgaagcga gcagcaattc
2881 gatcggcacc aagtcaccaa caaaatgtgg aatcctctcg acaacttcag ctacctccca
2941 ttgtggctag cctcatccga ctcaaacgta aagtcagaag agaatatgcg agaactggag
3001 atgcccgaat ccagcagatt cacagtaggc ttgccaatcg actacataaa gtgctgaatc
3061 gcagaaagca gtcccaaatt gataatttgt tggaaaactt ggacactgat ggctccacaa
3121 atttctctct atggcgtatc acaaaacggt ataagaccca ggctacaccg aactcggcta
3181 taaggaaccc ggcaggaggc tggtgccgca catcacggga aaaaacagaa gtgtttgcga
3241 accatttaga gcaacgcttc aaagcgctcg cctttgcgcc ggagagtcac agcctaatgg
3301 ttgcggagtc tcttcagaca ccattccaaa tggcattgcc cgccgatcct gtcacactgg
3361 aggaagtaaa ggagcttgta tcaaaattga agcccaagaa agctccgggt gaggaccttc
3421 ttgacaacag gacaatacgg ctccttccag atcaggctct gctatatctg gtgctaatat
3481 ttaacagcat cctgcgagtg ggatactttc cgaaagctcg gccgacggca agtattataa
3541 tgattctaaa gccaggaaag cagccattag atgtggactc atacaggccg accagccttc
3601 taccttcact gggcaagatg ctggagagat taatccttaa caggattctc actagcgagg
3661 aggtcactcg ggcgatccca aaattccaat ttggtttccg gctgcagcat ggcacgccag
3721 aacaactgca tagggttgtt aatttcgcgc tagaggccct ggaaaagaag gagtatgccg
3781 gtagctgttt tttagacatc cagcaagctt tcgatagagt gtggcaccct ggtcttcttt
3841 acaaggccaa gagcttgcta tctccccagc tgttccagct tataaagagc ttttgggaag
3901 ggcgcaagtt cagcgtgacg gccgatggat gcagatcctc tgtaaaattt attgaagccg
3961 gcgtccccca aggcagtgtt ctaggcccca ccctgtactc catcttcact gcggatatgc
4021 ctaaccaaaa tgcagtgacc ggactcgcag aaggagaggt cctaatcgcg acatatgccg
4081 acgacatcgc agtgctcact aaaagcacct gcattgtcga ggctacggat gctctacagg
4141 aatacttgga cgcattccag gaatgggctg tgaagtggaa cgtgagcatc aatgccggca
4201 aatgcgcaaa cgttactttt acaaacgcca ttcgcgactg ccccggtgtc acgatcaatg
4261 ggagcctatt aagccacaca catgagtaca aataccttgg tgtcatcctg gacagaagcc
4321 tgaccttcag aagacatatt acgtcgttgc agcactcatt caggacaagg ataacaaaaa
4381 tgaattggtt gcttgcagca cgcaataagc tgtccttgga caacaaggta aaaatctaca
4441 aatgcatagt agctccaggg cttttctatg ccatccaagt atatggaatt gcggcaagga
4501 ctcacctgaa caaaatccga gttctgcaag ctaaaatgct gaggaagatc tctggggctc
4561 cttggtacat gagaaccagg gacatcgagt gcgatctcaa ggtgccaaaa atcggtgaca
4621 aaatccgtga ggttgccaag aaatatcacg agagactgga ttctcaccca aacagcctgg
4681 ccaggagact cggtgttgca gcacagaggt ctgccagccc ccgctctaga gttagaagaa
4741 gactcaaacg tcaccaccct caagacctgc tggaccgggc cttgacgtaa acttgttcct
4801 atattcccaa aagtaaaatt gtctgtgata tctacacccc caaattcttg tatcccctaa
4861 actatgtata ctatgcccgt ttcttcccat agccctacat tataaactac caccttccga
4921 ttagattaag ctgccttaaa ggtagcaggg cactaatctg tacatatttc ctttaataaa
4981 aaaaaaaaaa aaaaaaa
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