GenBank-Updates@genbank.bio.net (01/23/91)
LOCUS HUMGYPB06 877 bp ds-DNA PRI 23-JAN-1991
DEFINITION Human glycophorin B gene, exon 5, and Alu repeat.
ACCESSION M24137
KEYWORDS Alu repetitive element; glycophorin; sialoglycoprotein.
SEGMENT 6 of 6
SOURCE Human proerythyroblast cell line K562 DNA, clone C25.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 771 to 877)
AUTHORS Kudo,S.
TITLE ;
JOURNAL Unpublished (1989) La Jolla Cancer Found. La Jolla, CA 92037
STANDARD full staff_review
REFERENCE 2 (bases 1 to 877)
AUTHORS Kudo,S. and Fukuda,M.
TITLE Structural organization of glycophorin A and B genes: Glycophorin B
gene evolved by homologous recombination at Alu repeat sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 4619-4623 (1989)
STANDARD full staff_review
COMMENT Draft entry and computer-readable sequence for [Proc. Natl. Acad.
Sci. U.S.A. 86, 4619-4623 (1989)] kindly provided
by S. Kudo, 21-APR- 1989.
FEATURES Location/Qualifiers
precursor_RNA <1..723
/note="GYPB mRNA and intron"
intron <1..522
/note="GYPB intron D"
CDS join(M24130:262..298,
M24131:137..235,M24135:241..279,M24136:200..294,
523..528)
/note="glycophorin B"
repeat_region 32..49
/note="5' direct repeat"
repeat_region 50..343
/note="Alu repeat"
repeat_region 344..361
/note="3' direct repeat"
exon 523..528
/note="glycophorin B, exon 5 /nomgen='GYPB'
/map='4q28-q32' /hgml_locus_uid='LM0014N'"
BASE COUNT 219 a 206 c 188 g 264 t
ORIGIN About 1.2 kb after segment 5; chromosome 4q31.
1 gaattcttaa catcagtgat tttttttgaa tcattaatgc ttttttaaat ttttttttga
61 gacagagttt ccctctgtca cccaggctcg agtgcaaagt ggcgcaatct ctgctcactg
121 cagcctctcc tccctggttc aagtgattct cgtgcttcac ctccacagta gttgggacta
181 caggtgcggg ccacatgcct gactaatttt tgtatttttt taatagcaga gatggggttt
241 tgctgtgttg gccaggctgg tttcaaactc ctgacctcaa gtgatccacc tgccttggcc
301 tccaaagtgc tgggattaca ggtgtgagcc actgcgcccg gccctaatta gggtttttat
361 aaagccaaaa gaacttggca acacccctag gtacccttta gaagcctcca attggctaca
421 gcctgtgaag gattggcctg tgaccaatca gaggctgaag tggaggctta gctcatggtc
481 aagcagaggc tgaagtggaa acttcttgtc tttttatcac aggcatgagg atgtggcctc
541 gatgctgcct gatcttgcct agaaccggct gcacctgctg ttctcttctt tatgcaaact
601 ggctgcacct gctattcctt tgcttatgcc cctacccctg gctatcctaa ttccctgttc
661 tcctgcctca ctattactgt attctctact tctaaataaa aataaaacaa aatacaaacc
721 gttttcatgt attatagtca tgatttgtta tttcaagcta tgtttaaaat gtaaagccca
781 ttacagtagg atagatgaga agaaagaagg gtctgaacaa agccaacagc gagaacatgc
841 agaaggggaa tgaagacttc agcctggact ctcatta
//