GenBank-Updates@genbank.bio.net (01/23/91)
LOCUS HUMGYPB06 877 bp ds-DNA PRI 23-JAN-1991 DEFINITION Human glycophorin B gene, exon 5, and Alu repeat. ACCESSION M24137 KEYWORDS Alu repetitive element; glycophorin; sialoglycoprotein. SEGMENT 6 of 6 SOURCE Human proerythyroblast cell line K562 DNA, clone C25. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 771 to 877) AUTHORS Kudo,S. TITLE ; JOURNAL Unpublished (1989) La Jolla Cancer Found. La Jolla, CA 92037 STANDARD full staff_review REFERENCE 2 (bases 1 to 877) AUTHORS Kudo,S. and Fukuda,M. TITLE Structural organization of glycophorin A and B genes: Glycophorin B gene evolved by homologous recombination at Alu repeat sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 4619-4623 (1989) STANDARD full staff_review COMMENT Draft entry and computer-readable sequence for [Proc. Natl. Acad. Sci. U.S.A. 86, 4619-4623 (1989)] kindly provided by S. Kudo, 21-APR- 1989. FEATURES Location/Qualifiers precursor_RNA <1..723 /note="GYPB mRNA and intron" intron <1..522 /note="GYPB intron D" CDS join(M24130:262..298, M24131:137..235,M24135:241..279,M24136:200..294, 523..528) /note="glycophorin B" repeat_region 32..49 /note="5' direct repeat" repeat_region 50..343 /note="Alu repeat" repeat_region 344..361 /note="3' direct repeat" exon 523..528 /note="glycophorin B, exon 5 /nomgen='GYPB' /map='4q28-q32' /hgml_locus_uid='LM0014N'" BASE COUNT 219 a 206 c 188 g 264 t ORIGIN About 1.2 kb after segment 5; chromosome 4q31. 1 gaattcttaa catcagtgat tttttttgaa tcattaatgc ttttttaaat ttttttttga 61 gacagagttt ccctctgtca cccaggctcg agtgcaaagt ggcgcaatct ctgctcactg 121 cagcctctcc tccctggttc aagtgattct cgtgcttcac ctccacagta gttgggacta 181 caggtgcggg ccacatgcct gactaatttt tgtatttttt taatagcaga gatggggttt 241 tgctgtgttg gccaggctgg tttcaaactc ctgacctcaa gtgatccacc tgccttggcc 301 tccaaagtgc tgggattaca ggtgtgagcc actgcgcccg gccctaatta gggtttttat 361 aaagccaaaa gaacttggca acacccctag gtacccttta gaagcctcca attggctaca 421 gcctgtgaag gattggcctg tgaccaatca gaggctgaag tggaggctta gctcatggtc 481 aagcagaggc tgaagtggaa acttcttgtc tttttatcac aggcatgagg atgtggcctc 541 gatgctgcct gatcttgcct agaaccggct gcacctgctg ttctcttctt tatgcaaact 601 ggctgcacct gctattcctt tgcttatgcc cctacccctg gctatcctaa ttccctgttc 661 tcctgcctca ctattactgt attctctact tctaaataaa aataaaacaa aatacaaacc 721 gttttcatgt attatagtca tgatttgtta tttcaagcta tgtttaaaat gtaaagccca 781 ttacagtagg atagatgaga agaaagaagg gtctgaacaa agccaacagc gagaacatgc 841 agaaggggaa tgaagacttc agcctggact ctcatta //