GenBank-Updates@genbank.bio.net (01/24/91)
LOCUS BPEFHAB1 11830 bp ds-DNA BCT 24-JAN-1991
DEFINITION B.pertussis filamentous hemagglutinin (fhaB) gene, complete cds.
ACCESSION M60351 J04531 X52156
KEYWORDS filamentous hemagglutinin.
SOURCE B.pertussis (strain BP338) DNA.
ORGANISM Bordetella pertussis
Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Aerobic rods and
cocci; Alcaligenaceae.
REFERENCE 1 (sites)
AUTHORS Relman,D.A., Domenighini,M., Tuomanen,E., Rappuoli,R. and Falkow,S.
TITLE Filamentous hemagglutinin of Bordetella pertussis nucleotide
sequence and crucial role in adherence
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 2637-2641 (1989)
STANDARD full staff_review
REFERENCE 2 (sites)
AUTHORS Relman,D.A., Domenighini,M., Tuomanen,E., Rappuoli,R. and Falkow,S.
TITLE Genetic characterization of Bordetella pertussis filamentous
hemagglutinin: A protein processed from an unusual large precursor
JOURNAL Mol. Microbiol. 4, 787-800 (1990)
STANDARD full staff_review
REFERENCE 3 (bases 1 to 11830)
AUTHORS Domenighini,M.
TITLE ;
JOURNAL Unpublished (1991)
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS 253..11028
/gene="fhaB"
/label=ORF1
/codon_start=253
/product="filamentous hemagglutinin"
CDS 298..11028
/gene="fhaB"
/label=ORF2
/codon_start=298
/product="filamentous hemagglutinin"
CDS 427..11028
/gene="fhaB"
/label=ORF3
/codon_start=427
/product="filamentous hemagglutinin"
BASE COUNT 2190 a 3632 c 4261 g 1747 t
ORIGIN
1 gaattcctgc gctggcaccc gcggcgggcc ggggagcggg ttgtcggcgc acgcctatac
61 gtgccggaca gggtttgatg gtttgactaa gaaatttcct acaagtcttg tataaatatc
121 cattgatgga cgggatcatt actgactgac gaagtgctga ggtttatcca gactatggca
181 ctggatttca aaacctaaaa cgagcaggcc gataacggat tctgccgatt acttcacttc
241 gctggtcgga atatgaacac gaacctgtac aggctggtct tcagccatgt tcgcggcatg
301 cttgttcccg tgagcgagca ttgcaccgtc ggaaacacct tctgtgggcg cacgcgtggt
361 caagcgcgaa gtggggcccg cgccacgagc ctgtccgtag cgcccaatgc gctggcctgg
421 gccctgatgt tggcgtgtac gggtcttccg ttagtaacgc acgcccaggg cttggttcct
481 caggggcaga cacaggtgct gcagggcggg aacaaggttc ccgttgtcaa tatcgccgac
541 ccaaattccg gcggcgtctc gcacaacaag ttccagcagt tcaacgtcgc caaccctggc
601 gtggtcttca acaacggcct gaccgacggc gtgtccagga tcggcggggc gctgaccaag
661 aaccccaacc tgactcgcca ggcctcggcc attcttgccg aagtcacgga cacttcgccc
721 agtcgcctgg ccggtacgct cgaagtctat ggcaagggcg ccgacctcat catcgccaac
781 cccaacggca tcagcgtcaa cggcctgagc acgctcaacg ccagcaacct gacgctcacg
841 acggggcgtc ccagcgtcaa cggcggccgc atcggccttg atgtccaaca gggcaccgtc
901 acgatcgaac gaggcggcgt caatgccacc ggcctgggct atttcgacgt ggtggcgcgc
961 ctggtcaagc tgcagggtgc cgtgtcgagc aagcagggca agcccctggc cgacatcgcg
1021 gtggtcgccg gcgccaaccg gtacgaccac gcaacccgcc gcgccacgcc gatcgccgca
1081 ggcgcgcgcg gcgccgccgc gggcgcctac gcgattgacg gcacggcggc gggcgccatg
1141 tacggcaagc acatcacgct ggtgtccagc gattcaggcc tgggcgtgcg ccagctcggc
1201 agcctgtcct cgccatcggc catcaccgtg tcgtcgcagg gcgaaatcgc gctgggcgac
1261 gccacggtcc agcgcggccc gctcagcctc aagggcgcgg gggtcgtgtc ggccggcaaa
1321 ctggcctccg gggggggggc ggtgaacgtc gcgggcggcg gggcggtgaa gatcgcgtcg
1381 gccagcagcg ttggaaacct cgcggtgcaa ggcggcggca aggtacaggc cacgctgttg
1441 aatgccgggg ggacgttgct ggtgtcgggc cgccaggccg tccagcttgg cgcggcgagc
1501 agccgtcagg cgctgtccgt gaacgcgggc ggcgccctca aggcggacaa gctgtcggcg
1561 acgcgacggg tcgacgtgga tggcaagcag gccgtcgcgc tggggtcggc cagcagcaat
1621 gcgctgtcgg tgcgtgccgg cggcgccctc aaggcgggca agctgtcggc gacggggcga
1681 ctggacgtgg acggcaagca ggccgtcacg ctgggttcgg ttgcgagcga cggtgcgctg
1741 tcggtaagcg ctggcggaaa cctgcgggcg aacgaattgg tctccagtgc ccaacttgag
1801 gtgcgtgggc agcgggaggt cgcgctggat gacgcttcga gcgcacgcgg catgaccgtg
1861 gttgccgcag gagcgctggc ggcccgcaac ctgcagtcca agggcgccat cggcgtacag
1921 ggtggagagg cggtcagcgt ggccaacgcg aacagcgacg cggaattgcg cgtgcgcggg
1981 cgcggccagg tggatctgca cgacctgagc gcagcgcgcg gcgcggatat ctccggcgag
2041 gggcgcgtca atatcggccg tgcgcgcagc gatagcgatg tgaaggtctc cgcgcacggc
2101 gccttgtcga tcgatagcat gacggccctc ggtgcgatcg gcgtccaggc aggcggcagc
2161 gtgtcggcca aggatatgcg cagccgtggc gccgtcaccg tcagcggcgg cggcgccgtc
2221 aacctgggcg atgtccagtc ggatgggcag gtccgcgcca ccagcgcggg cgccatgacg
2281 gtgcgagacg tcgcggctgc cgccgacctt gcgctgcagg cgggcgacgc gttgcaggcc
2341 gggttcctga aatcggccgg tgccatgacc gtgaacggcc gcgatgccgt gcgactggat
2401 ggcgcgcacg cgggcgggca attgcgggtt tccagcgacg ggcaggctgc gttgggcagt
2461 ctcgcggcca agggcgagct gacggtatcg gccgcgcgcg cggcgaccgt ggccgagttg
2521 aagtcgctgg acaacatctc cgtgacgggc ggcgaacgcg tgtcggttca gagcgtcaac
2581 agcgcgtcca gggtcgccat ttcggcgcac ggcgcgctgg atgtaggcaa ggtttccgcc
2641 aagagcggta tcgggctcga aggctggggc gcggtcggag cggactccct cggttccgac
2701 ggcgcgatca gcgtgtccgg gcgcgatgcg gtcagggtcg atcaagcccg cagtcttgcc
2761 gacatttcgc tgggggcgga aggcggcgcc acgctgggcg cggtggaggc cgccggttcg
2821 atcgacgtgc gcggcggatc cacggtggcg gcgaactcgc tgcacgccaa tcgcgacgtt
2881 cgggtcagcg gcaaggatgc ggtgcgcgta acggccgcca ccagcggggg cggtctgcat
2941 gtgtcgagcg gccgccagct cgatctgggc gccgtgcagg cgcgcggcgc gctggccctg
3001 gacggaggcg ccggcgtggc gctgcaatcg gccaaggcta gcggcacgct gcatgtgcag
3061 ggcggcgagc acctggacct gggcacgttg gccgccgtag gggcggtgga cgtcaatggc
3121 acgggagacg tgcgcgttgc gaagctggtg agcgatgcag gcgccgatct gcaagcgggg
3181 cgctccatga cgctgggtat cgtcgacacg accggcgatc tgcaggcgcg cgcgcagcag
3241 aagctggagc tcgggtcggt taagagcgat ggcggccttc aggcggccgc cggcggggcc
3301 ctcagcctgg cggcggcgga agtcgcaggg gcgctggagc tctcgggcca gggcgtcacc
3361 gtggacagag ccagcgctag ccgggcacgc atcgacagca ccggttcggt cggcatcggc
3421 gcgctgaagg caggcgctgt cgaggccgcc tcgccacggc gggcgcgccg cgcgctgcgg
3481 caggatttct tcacgcccgg cagcgtggtg gtccgcgccc agggcaatgt cacggtcggg
3541 cgcggcgatc cgcatcaggg cgtgctggcc cagggcgaca tcatcatgga tgcgaagggc
3601 ggcaccttgc tgttgcgcaa cgatgccttg accgagaacg ggacggtcac catatcggcc
3661 gattcggccg tgctcgagca ttccaccatc gagagcaaga tcagccagag cgtgctggct
3721 gccaaagggg acaagggcaa gccggcggtg tcggtgaagg tcgcgaagaa gctgtttctc
3781 aatggtacgt tgcgggccgt caacgacaac aacgaaacca tgtccgggcg ccagatcgac
3841 gtcgtggacg gacgtccgca gatcaccgac gcggtcacgg gcgaagcgcg taaggacgaa
3901 tcggttgtgt ccgacgccgc gctcgtggcc gatggcggtc cgatcgtggt cgaggccggc
3961 gagctggtca gccatgccgg cggtatcggc aacggccgca acaaggagaa tggcgccagc
4021 gtcaccgtgc gcacgactgg caacctggtc aacaagggct acatctcggc cggcaagcag
4081 ggcgtgctcg aggtgggcgg cgccttgacg aacgagttcc tggtcggctc ggacggcacc
4141 cagcgcatcg aggcgcagcg catcgagaac aggggcacct tccagagcca ggctccggcg
4201 ggcacggccg gcgccctggt ggtcaaggct gccgaggcca tcgtgcacga cggcgtcatg
4261 gccaccaaag gcgagatgca gatcgccggc aagggcggcg ggtctccgac cgtcaccgcc
4321 ggcgcaaagg cgacgaccag cgcgaacaag ctgagcgtcg acgtggcaag ctgggacaac
4381 gcgggaagcc tggatatcaa gaagggcggc gcgcaggtca cggtggccgg gcgctatgcc
4441 gagcacggcg aggtttcgat acagggcgat tacaccgtct cggccgacgc catcgcgctg
4501 gcggcgcagg tcacccagcg cggaggcgcc gcgaacctga cctcgcggca cgacacccgt
4561 ttctccaaca agattcgcct gatggggccg ttgcaggtca acgccggcgg gccggtgtcc
4621 aataccggca atctgaaagt gcgcgagggc gtgaccgtaa cggcggcgtc gttcgacaac
4681 gagaccgggg ccgaggtcat ggccaagagc gccacgctga cgacttccgg ggccgcgcgc
4741 aacgcgggca agatgcaggt caaggaggcc gccacgatcg ttgccgccag cgtttccaat
4801 cccggcacgt tcacggccgg caaggatatc actgttacct cgcgcggagg attcgataac
4861 gaaggcaaga tggagtccaa caaggacatc gtcatcaaga cggaacagtt cagcaatggc
4921 agggttctcg acgccaagca tgatctgacg gtcacggcga gcgggcaggc ggacaaccgg
4981 ggcagcctga aggcaggcca cgatttcacg gtgcaggccc agcgtatcga caatagcgga
5041 accatggccg ccggccacga cgccacgctg aaggcgccgc acctgcgcaa tacgggccag
5101 gtcgtagccg ggcacgacat ccatatcatc aacagcgcca agctggagaa caccgggcgc
5161 gtggatgcgc gcaacgacat cgctctggat gtggcggatt tcaccaacac gggatccctc
5221 tacgccgagc atgacgcgac gctgacgctt gcgcaaggca cgcagcgcga tctggtggtg
5281 gaccaggatc atatcctgcc ggtggcggag gggacgttac gcgtcaaggc caagtcgctg
5341 accaccgaaa tcgagaccgg caatcccggc agcctgatcg ccgaggtgca ggaaaatatc
5401 gacaacaagc aggccatcgt cgtcggcaag gacctgacgc tgagttcggc gcacggcaac
5461 gtggccaacg aagcgaacgc gctgctgtgg gccgccgggg agctgaccgt caaggcgcag
5521 aacatcacca ataaacgggc cgcgctgatc gaggcgggcg gcaacgcccg gctgacggcg
5581 gccgttgcct tgctcaacaa gctgggccgc attcgcgcgg gcgaggacat gcacctggat
5641 gcgccgcgca tcgagaacac cgcgaaactg agcggcgagg tgcaacgcaa aggcgtgcag
5701 gacgtcgggg gaggcgagca cggccgctgg agcggtatcg gctatgtcaa ctactggttg
5761 cgcgccggca atgggaagaa ggcgggaacc atcgccgcgc cgtggtatgg cggtgatctg
5821 acggcggagc agtcgctcat cgaggtcggc aaggatctct atctgaatgc cggagcgcgc
5881 aaggacgaac atcgccatct gctcaatgaa ggcgtgatcc aggcgggcgg ccatggccac
5941 atcggcggcg acgtggacaa ccggtcggtg gtgcgcaccg tgtccgccat ggagtatttc
6001 aagacgcctc ttccggtgag cctgactgcc ctggacaatc gtgccggctt gtctccggcg
6061 acctggaact tccagtccac gtatgaactc ctggattatc tgctggacca gaatcgctac
6121 gagtacattt gggggctgta tccgacctac accgaatggt cggtgaatac gctgaagaac
6181 ctcgacctgg gctaccaggc caagccggct cccactgcgc cgccgatgcc caaggctccc
6241 gaactcgacc tgcgtggcca tacgctggag tcggccgaag gccggaagat ctttggcgag
6301 tacaagaagc tgcaaggcga gtacgagaag gcgaagatgg ccgtccaggc cgtggaggct
6361 tacggcgagg ctactcggcg cgtccatgat cagctgggcc aacgttatgg taaggccctg
6421 ggcggcatgg atgccgagac caaggaggtc gacggcatca tccaggagtt cgccgcggat
6481 ctgcgaacgg tctatgcgaa gcaggccgac caggcgacca tcgacgcaga gacggacaag
6541 gtcgcccagc gctacaagtc gcagatcgac gcggtgcggc tgcaggcgat ccagcctggc
6601 cgggtcacgc tggccaaggc gctgtcggcg gcgctgggcg ccgactggcg cgcgctgggt
6661 cactcccaat tgatgcagcg ctggaaggat ttcaaggcgg gcaagcgcgg cgcggaaatc
6721 gcgttctatc ccaaggaaca aaccgtgctg gccgccggcg ccggtttgac cctgtccaac
6781 ggggcgatcc acaacggcga gaacgccgcg cagaatcgcg gccggccgga aggcctgaaa
6841 atcggcgcac attcggcgac ttcggtgagc ggctcgttcg acgccttgcg cgacgtgggg
6901 ctggaaaagc ggctggatat cgacgatgcg ctggctgccg tgctcgtgaa tccgcatatt
6961 ttcacgcgga tcggggcggc tcagacatcc cttgccgacg gcgccgccgg gccggcgctg
7021 gcgcgccagg ccaggcaagc gccggagacc gacggcatgg tggatgcgcg agggctgggc
7081 agcgccgatg cgctcgcttc cctggccagc ttggacgcgg cgcaagggct ggaggtatcc
7141 ggcaggcgca atgcgcaggt ggccgacgcc gggctcgccg ggccgagcgc cgtcgcggcg
7201 ccggccgtcg gggcggccga tgtcggcgtg gagcctgtca cgggggacca ggtcgaccag
7261 cctgtcgtgg cggtcgggct cgagcagcct gtcgcgacgg tccgggtcgc gccgccagcc
7321 gtcgcgttgc cgcggccgct gttcgaaacc cgcatcaagt ttatcgacca gagcaaattc
7381 tacggctcgc gttatttctt cgagcagatc ggctacaagc ccgatcgcgc cgcgcgggtg
7441 gcgggcgaca actatttcga taccacgctg gtgcgcgagc aggtgcggcg cgccctgggc
7501 ggctatgaaa gccgcctgcc cgtgcgcggt gtcgcgttgg tggccaagct gatggattcg
7561 gccgggacgg tcggcaaggc gctgggcctg aaggtgggtg tcgcgccgac cgcgcagcag
7621 ctcaagcagg ccgaccgcga tttcgtctgg tacgtggata ccgtgatcga cggccagaag
7681 gttctcgctc cccggctgta cctgaccgag gcgacgcgcc agggcatcac ggatcagtac
7741 gccggcggcg gggcgctgat tgcctccggc ggcgacgtaa ctgtcaatac ggacggccat
7801 gacgtcagtt cggtcaacgg gctgatccag ggcaggagcg tcaaggtgga cgcgggcaag
7861 ggcaaggtcg tggtggccga cagcaagggg gcgggcggcg gcatcgaggc cgatgacgag
7921 gtcgacgtct caggccggga tatcggcatc gagggcggca agctgcgcgg caaggatgtc
7981 aggctcaagg ccgacacggt caaggtcgcg acctcgatgc gttacgacga caagggcagg
8041 ctggcggcgc gcggcgacgg cgccctggat gcgcaaggcg gccagctgca tatcgaggcc
8101 aagcgcctgg agacggccgg cgcgacgctc aagggcggca aggtgaagct ggatgtcgat
8161 gacgtcaagt tgggcggcgt gtacgaggcg gggtccagct acgagaacaa gagctcgacg
8221 ccgctgggca gcctgttcgc catcctgtcg tcgacgacgg aaaccaacca gtcggcacac
8281 gcgaaccatt acggtacgcg catcgaagcc ggtacgctgg aaggaaagat gcagaacctg
8341 gagatcgaag gcggttcggt cgatgccgcg catacggacc tgtccgtggc ccgcgacgcg
8401 aggttcaagg ccgccgcgga tttcgcgcac gccgagcatg agaaggatgt gcgccaactg
8461 tccctgggtg ccaaggtggg ggcgggcggc tacgaggcgg gcttcagcct gggcagcgaa
8521 agcggtctgg aagcgcacgc cggccgcggt atgaccgcgg gcgctgaagt caaggtaggt
8581 tatcgggcat cgcacgaaca gtcctcggaa accgaaaagt cctatcgcaa cgcgaacctc
8641 aatttcggtg gaggctccgt cgaggctggc aatgtcctgg atatcggcgg cgccgacatc
8701 aaccggaacc ggtacggcgg cgccgcgaag gggaacgccg ggaccgagga ggccttgcgc
8761 atgcgcgcca agaaggtcga gtccaccaag tacgtcagcg agcagacgag ccagagctcc
8821 ggctggagcg tggaggtggc atcgacggcc agtgcccgtt ccagcctgct gacggccgcc
8881 acgcgcctgg gcgacagcgt ggcgcagaat gtcgaggacg gccgcgagat ccgcggcgag
8941 ctgatggctg cgcaagtcgc cgcggaggcc acgcaactgg taaccgccga cacggcggcg
9001 gtggcactga gtgccggaat cagcgccgac ttcgacagca gccacagccg ctccacctcg
9061 cagaataccc aatatctggg cggaaacttg tccatcgagg ccaccgaggg cgatgcgacg
9121 ctggtgggcg cgaagttcgg cggtggcgac caggtcagct tgaaggcagc gaagagcgtg
9181 aacctcatgg cggccgaatc gaccttcgaa tcgtactcgg agagccacaa cttccacgcc
9241 tccgccgacg cgaaccttgg cgccaacgcc gtgcagggcg ccgttggcct ggggttgact
9301 gcgggtatgg ggacgtcgca tcagattacc aacgaaaccg gcaagaccta tgccggaacc
9361 tcggtggatg cggcgaacgt gtcgatcgat gcaggcaagg atctgaacct ttccgggtcc
9421 cgcgtgcggg gtaagcatgt tgtcctggat gtcgagggcg atatcaatgc gaccagcaag
9481 caggatgaac gcaactacaa ctccagcggt ggcggttggg acgcctcggc aggggtggcg
9541 attcagaacc gcacgttggt tgcgcccgtg gggtctgccg gcttcaattt caatacggaa
9601 cacgacaatt cgcgcctgac caatgacggg gcggcgggtg tcgttgccag cgacgggttg
9661 acgggccatg tgaaaggcga cgccaacctg accggcgcga ccattgccga tttgtcgggc
9721 aagggcaatc tcaaggtcga cggcgcggtc aacgcgcaga acctgaaaga ctaccgcgac
9781 aaggacggcg gcagcggcgg cctgaacgtg ggcatctcgt cgaccacgct ggcgcccacc
9841 gtgggcgtgg cgttcggcag ggtggccgga gaggattatc aggccgagca gcgcgccacg
9901 attgacgtcg gtcaaaccaa ggatcccgcg cgcctgcagg tcggcggcgg cgtcaagggt
9961 accctcaatc aggacgccgc gcaggccacg gtcgttcagc gcaacaagca ctgggccgga
10021 ggcgggtcgg aattctcggt ggctggcaag tcactgaaga agaagaacca ggtccgcccg
10081 gtggagacgc cgacgccgga tgtcgtggat ggaccgccta gccgtcccac cacgccgccc
10141 gcgtcgccgc agccgatccg cgcgacggtc gaggtcagtt cgccgccgcc ggtgtccgtg
10201 gccacggtcg aagtcgtgcc gcggccgaag gtcgaaacgg ctcagccgct tccgcctcgg
10261 ccggtggcgg cccaggtcgt gccggtgacg cctcccaagg tggaggtcgc caaggtggaa
10321 gtcgtgccgc ggccgaaggt tgaaacggct cagccgcttc cgccccggcc ggtggtggcc
10381 gagaaggtga cgacgccggc ggtccagccc cagcttgcca aggtggagac ggtgcagccg
10441 gtgaagcccg aaaccaccaa gccgttgccc aagccgctgc cggtggcgaa ggtgacgaaa
10501 gcgccgccgc cggttgtgga gaccgcccag ccgctgccgc cggtcaagcc acagaaggcg
10561 acccccggcc ccgtggctga ggtgggcaag gctacggtca cgacggtgca ggtgcagagt
10621 gcgccgccca agccggcccc ggtggccaag cagcccgcgc ctgcaccgaa gcccaagccc
10681 aagcccaagc ccaaggccga gcgtccgaag ccgggcaaaa cgacgccctt gagcgggcgc
10741 cacgtggtgc aacagcaggt gcaggtcttg cagcggcaag cgagtgacat caacaacacc
10801 aagagcctgc ctggcgggaa gctgcccaag ccggtcaccg tgaagctgac cgacgagaac
10861 ggcaagccgc agacgtatac gatcaaccgg cgcgaggatc tgatgaagct caacggcaag
10921 gtgctgtcca ccaagacgac actgggcctg gagcagacct tccgcctgcg gtcgaggata
10981 tcggcggcaa gaactaccgg gtcttctatg aaaccaacaa ataggtagtc gcggcctgcc
11041 gcggctcggc gcatggggat tcgcagggtt ctcatgcgcc ggccaatgcc ggatagcggt
11101 gcaattgccg accatttcgc gcaccgcgct caaggacgta gggtcgacgg caggcgggac
11161 agtttttgac gtgaaactga ccgagtgtcc gcaggcattg aatggtcagc aagtgggatt
11221 gttcttcgaa tctggtggca cggttgacta tacgtcggga aacctgtttg cgtatcgggc
11281 cgatagtcag ggcgtcgaac aggctaccgc agagcgaaag ccgacaacgt gcaagccaat
11341 ctggatggtt ccgctattca tttgggccgc aacaagggtg cgcaggctgc tcagacgttt
11401 ctggtatcgc agacggctgg gtcgtcgacg tacggggcga ccctgcgcta tctggcatgc
11461 tacatccgtt cgggcgctgg ttccattgtt gcggggaatc tccgcagtca ggtggggttc
11521 tccgtgatgt atccgtagcc cgtgaaagag gggtcaccca ctgcgggggg ccccggtacg
11581 ggatggtcgg cttgtcacga gattcttgtt ttccatttct ttcttttcac tcggtcgcag
11641 cgccggcttg atgcatgcaa agcatcgata gctacgaacg gccgcgattc ttgaatcatg
11701 aatacatacg cttgtgacgg ggcgctcgcg agagccggcc ccagggatgg tttacgcctg
11761 catttacggt aaagcggcaa ggcggcatgg cgcgctggcg gcggctgggc gtcgcggcgc
11821 tgggccatgc
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