GenBank-Updates@genbank.bio.net (01/24/91)
LOCUS BPEFHAB1 11830 bp ds-DNA BCT 24-JAN-1991 DEFINITION B.pertussis filamentous hemagglutinin (fhaB) gene, complete cds. ACCESSION M60351 J04531 X52156 KEYWORDS filamentous hemagglutinin. SOURCE B.pertussis (strain BP338) DNA. ORGANISM Bordetella pertussis Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Aerobic rods and cocci; Alcaligenaceae. REFERENCE 1 (sites) AUTHORS Relman,D.A., Domenighini,M., Tuomanen,E., Rappuoli,R. and Falkow,S. TITLE Filamentous hemagglutinin of Bordetella pertussis nucleotide sequence and crucial role in adherence JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 2637-2641 (1989) STANDARD full staff_review REFERENCE 2 (sites) AUTHORS Relman,D.A., Domenighini,M., Tuomanen,E., Rappuoli,R. and Falkow,S. TITLE Genetic characterization of Bordetella pertussis filamentous hemagglutinin: A protein processed from an unusual large precursor JOURNAL Mol. Microbiol. 4, 787-800 (1990) STANDARD full staff_review REFERENCE 3 (bases 1 to 11830) AUTHORS Domenighini,M. TITLE ; JOURNAL Unpublished (1991) STANDARD simple staff_entry FEATURES Location/Qualifiers CDS 253..11028 /gene="fhaB" /label=ORF1 /codon_start=253 /product="filamentous hemagglutinin" CDS 298..11028 /gene="fhaB" /label=ORF2 /codon_start=298 /product="filamentous hemagglutinin" CDS 427..11028 /gene="fhaB" /label=ORF3 /codon_start=427 /product="filamentous hemagglutinin" BASE COUNT 2190 a 3632 c 4261 g 1747 t ORIGIN 1 gaattcctgc gctggcaccc gcggcgggcc ggggagcggg ttgtcggcgc acgcctatac 61 gtgccggaca gggtttgatg gtttgactaa gaaatttcct acaagtcttg tataaatatc 121 cattgatgga cgggatcatt actgactgac gaagtgctga ggtttatcca gactatggca 181 ctggatttca aaacctaaaa cgagcaggcc gataacggat tctgccgatt acttcacttc 241 gctggtcgga atatgaacac gaacctgtac aggctggtct tcagccatgt tcgcggcatg 301 cttgttcccg tgagcgagca ttgcaccgtc ggaaacacct tctgtgggcg cacgcgtggt 361 caagcgcgaa gtggggcccg cgccacgagc ctgtccgtag cgcccaatgc gctggcctgg 421 gccctgatgt tggcgtgtac gggtcttccg ttagtaacgc acgcccaggg cttggttcct 481 caggggcaga cacaggtgct gcagggcggg aacaaggttc ccgttgtcaa tatcgccgac 541 ccaaattccg gcggcgtctc gcacaacaag ttccagcagt tcaacgtcgc caaccctggc 601 gtggtcttca acaacggcct gaccgacggc gtgtccagga tcggcggggc gctgaccaag 661 aaccccaacc tgactcgcca ggcctcggcc attcttgccg aagtcacgga cacttcgccc 721 agtcgcctgg ccggtacgct cgaagtctat ggcaagggcg ccgacctcat catcgccaac 781 cccaacggca tcagcgtcaa cggcctgagc acgctcaacg ccagcaacct gacgctcacg 841 acggggcgtc ccagcgtcaa cggcggccgc atcggccttg atgtccaaca gggcaccgtc 901 acgatcgaac gaggcggcgt caatgccacc ggcctgggct atttcgacgt ggtggcgcgc 961 ctggtcaagc tgcagggtgc cgtgtcgagc aagcagggca agcccctggc cgacatcgcg 1021 gtggtcgccg gcgccaaccg gtacgaccac gcaacccgcc gcgccacgcc gatcgccgca 1081 ggcgcgcgcg gcgccgccgc gggcgcctac gcgattgacg gcacggcggc gggcgccatg 1141 tacggcaagc acatcacgct ggtgtccagc gattcaggcc tgggcgtgcg ccagctcggc 1201 agcctgtcct cgccatcggc catcaccgtg tcgtcgcagg gcgaaatcgc gctgggcgac 1261 gccacggtcc agcgcggccc gctcagcctc aagggcgcgg gggtcgtgtc ggccggcaaa 1321 ctggcctccg gggggggggc ggtgaacgtc gcgggcggcg gggcggtgaa gatcgcgtcg 1381 gccagcagcg ttggaaacct cgcggtgcaa ggcggcggca aggtacaggc cacgctgttg 1441 aatgccgggg ggacgttgct ggtgtcgggc cgccaggccg tccagcttgg cgcggcgagc 1501 agccgtcagg cgctgtccgt gaacgcgggc ggcgccctca aggcggacaa gctgtcggcg 1561 acgcgacggg tcgacgtgga tggcaagcag gccgtcgcgc tggggtcggc cagcagcaat 1621 gcgctgtcgg tgcgtgccgg cggcgccctc aaggcgggca agctgtcggc gacggggcga 1681 ctggacgtgg acggcaagca ggccgtcacg ctgggttcgg ttgcgagcga cggtgcgctg 1741 tcggtaagcg ctggcggaaa cctgcgggcg aacgaattgg tctccagtgc ccaacttgag 1801 gtgcgtgggc agcgggaggt cgcgctggat gacgcttcga gcgcacgcgg catgaccgtg 1861 gttgccgcag gagcgctggc ggcccgcaac ctgcagtcca agggcgccat cggcgtacag 1921 ggtggagagg cggtcagcgt ggccaacgcg aacagcgacg cggaattgcg cgtgcgcggg 1981 cgcggccagg tggatctgca cgacctgagc gcagcgcgcg gcgcggatat ctccggcgag 2041 gggcgcgtca atatcggccg tgcgcgcagc gatagcgatg tgaaggtctc cgcgcacggc 2101 gccttgtcga tcgatagcat gacggccctc ggtgcgatcg gcgtccaggc aggcggcagc 2161 gtgtcggcca aggatatgcg cagccgtggc gccgtcaccg tcagcggcgg cggcgccgtc 2221 aacctgggcg atgtccagtc ggatgggcag gtccgcgcca ccagcgcggg cgccatgacg 2281 gtgcgagacg tcgcggctgc cgccgacctt gcgctgcagg cgggcgacgc gttgcaggcc 2341 gggttcctga aatcggccgg tgccatgacc gtgaacggcc gcgatgccgt gcgactggat 2401 ggcgcgcacg cgggcgggca attgcgggtt tccagcgacg ggcaggctgc gttgggcagt 2461 ctcgcggcca agggcgagct gacggtatcg gccgcgcgcg cggcgaccgt ggccgagttg 2521 aagtcgctgg acaacatctc cgtgacgggc ggcgaacgcg tgtcggttca gagcgtcaac 2581 agcgcgtcca gggtcgccat ttcggcgcac ggcgcgctgg atgtaggcaa ggtttccgcc 2641 aagagcggta tcgggctcga aggctggggc gcggtcggag cggactccct cggttccgac 2701 ggcgcgatca gcgtgtccgg gcgcgatgcg gtcagggtcg atcaagcccg cagtcttgcc 2761 gacatttcgc tgggggcgga aggcggcgcc acgctgggcg cggtggaggc cgccggttcg 2821 atcgacgtgc gcggcggatc cacggtggcg gcgaactcgc tgcacgccaa tcgcgacgtt 2881 cgggtcagcg gcaaggatgc ggtgcgcgta acggccgcca ccagcggggg cggtctgcat 2941 gtgtcgagcg gccgccagct cgatctgggc gccgtgcagg cgcgcggcgc gctggccctg 3001 gacggaggcg ccggcgtggc gctgcaatcg gccaaggcta gcggcacgct gcatgtgcag 3061 ggcggcgagc acctggacct gggcacgttg gccgccgtag gggcggtgga cgtcaatggc 3121 acgggagacg tgcgcgttgc gaagctggtg agcgatgcag gcgccgatct gcaagcgggg 3181 cgctccatga cgctgggtat cgtcgacacg accggcgatc tgcaggcgcg cgcgcagcag 3241 aagctggagc tcgggtcggt taagagcgat ggcggccttc aggcggccgc cggcggggcc 3301 ctcagcctgg cggcggcgga agtcgcaggg gcgctggagc tctcgggcca gggcgtcacc 3361 gtggacagag ccagcgctag ccgggcacgc atcgacagca ccggttcggt cggcatcggc 3421 gcgctgaagg caggcgctgt cgaggccgcc tcgccacggc gggcgcgccg cgcgctgcgg 3481 caggatttct tcacgcccgg cagcgtggtg gtccgcgccc agggcaatgt cacggtcggg 3541 cgcggcgatc cgcatcaggg cgtgctggcc cagggcgaca tcatcatgga tgcgaagggc 3601 ggcaccttgc tgttgcgcaa cgatgccttg accgagaacg ggacggtcac catatcggcc 3661 gattcggccg tgctcgagca ttccaccatc gagagcaaga tcagccagag cgtgctggct 3721 gccaaagggg acaagggcaa gccggcggtg tcggtgaagg tcgcgaagaa gctgtttctc 3781 aatggtacgt tgcgggccgt caacgacaac aacgaaacca tgtccgggcg ccagatcgac 3841 gtcgtggacg gacgtccgca gatcaccgac gcggtcacgg gcgaagcgcg taaggacgaa 3901 tcggttgtgt ccgacgccgc gctcgtggcc gatggcggtc cgatcgtggt cgaggccggc 3961 gagctggtca gccatgccgg cggtatcggc aacggccgca acaaggagaa tggcgccagc 4021 gtcaccgtgc gcacgactgg caacctggtc aacaagggct acatctcggc cggcaagcag 4081 ggcgtgctcg aggtgggcgg cgccttgacg aacgagttcc tggtcggctc ggacggcacc 4141 cagcgcatcg aggcgcagcg catcgagaac aggggcacct tccagagcca ggctccggcg 4201 ggcacggccg gcgccctggt ggtcaaggct gccgaggcca tcgtgcacga cggcgtcatg 4261 gccaccaaag gcgagatgca gatcgccggc aagggcggcg ggtctccgac cgtcaccgcc 4321 ggcgcaaagg cgacgaccag cgcgaacaag ctgagcgtcg acgtggcaag ctgggacaac 4381 gcgggaagcc tggatatcaa gaagggcggc gcgcaggtca cggtggccgg gcgctatgcc 4441 gagcacggcg aggtttcgat acagggcgat tacaccgtct cggccgacgc catcgcgctg 4501 gcggcgcagg tcacccagcg cggaggcgcc gcgaacctga cctcgcggca cgacacccgt 4561 ttctccaaca agattcgcct gatggggccg ttgcaggtca acgccggcgg gccggtgtcc 4621 aataccggca atctgaaagt gcgcgagggc gtgaccgtaa cggcggcgtc gttcgacaac 4681 gagaccgggg ccgaggtcat ggccaagagc gccacgctga cgacttccgg ggccgcgcgc 4741 aacgcgggca agatgcaggt caaggaggcc gccacgatcg ttgccgccag cgtttccaat 4801 cccggcacgt tcacggccgg caaggatatc actgttacct cgcgcggagg attcgataac 4861 gaaggcaaga tggagtccaa caaggacatc gtcatcaaga cggaacagtt cagcaatggc 4921 agggttctcg acgccaagca tgatctgacg gtcacggcga gcgggcaggc ggacaaccgg 4981 ggcagcctga aggcaggcca cgatttcacg gtgcaggccc agcgtatcga caatagcgga 5041 accatggccg ccggccacga cgccacgctg aaggcgccgc acctgcgcaa tacgggccag 5101 gtcgtagccg ggcacgacat ccatatcatc aacagcgcca agctggagaa caccgggcgc 5161 gtggatgcgc gcaacgacat cgctctggat gtggcggatt tcaccaacac gggatccctc 5221 tacgccgagc atgacgcgac gctgacgctt gcgcaaggca cgcagcgcga tctggtggtg 5281 gaccaggatc atatcctgcc ggtggcggag gggacgttac gcgtcaaggc caagtcgctg 5341 accaccgaaa tcgagaccgg caatcccggc agcctgatcg ccgaggtgca ggaaaatatc 5401 gacaacaagc aggccatcgt cgtcggcaag gacctgacgc tgagttcggc gcacggcaac 5461 gtggccaacg aagcgaacgc gctgctgtgg gccgccgggg agctgaccgt caaggcgcag 5521 aacatcacca ataaacgggc cgcgctgatc gaggcgggcg gcaacgcccg gctgacggcg 5581 gccgttgcct tgctcaacaa gctgggccgc attcgcgcgg gcgaggacat gcacctggat 5641 gcgccgcgca tcgagaacac cgcgaaactg agcggcgagg tgcaacgcaa aggcgtgcag 5701 gacgtcgggg gaggcgagca cggccgctgg agcggtatcg gctatgtcaa ctactggttg 5761 cgcgccggca atgggaagaa ggcgggaacc atcgccgcgc cgtggtatgg cggtgatctg 5821 acggcggagc agtcgctcat cgaggtcggc aaggatctct atctgaatgc cggagcgcgc 5881 aaggacgaac atcgccatct gctcaatgaa ggcgtgatcc aggcgggcgg ccatggccac 5941 atcggcggcg acgtggacaa ccggtcggtg gtgcgcaccg tgtccgccat ggagtatttc 6001 aagacgcctc ttccggtgag cctgactgcc ctggacaatc gtgccggctt gtctccggcg 6061 acctggaact tccagtccac gtatgaactc ctggattatc tgctggacca gaatcgctac 6121 gagtacattt gggggctgta tccgacctac accgaatggt cggtgaatac gctgaagaac 6181 ctcgacctgg gctaccaggc caagccggct cccactgcgc cgccgatgcc caaggctccc 6241 gaactcgacc tgcgtggcca tacgctggag tcggccgaag gccggaagat ctttggcgag 6301 tacaagaagc tgcaaggcga gtacgagaag gcgaagatgg ccgtccaggc cgtggaggct 6361 tacggcgagg ctactcggcg cgtccatgat cagctgggcc aacgttatgg taaggccctg 6421 ggcggcatgg atgccgagac caaggaggtc gacggcatca tccaggagtt cgccgcggat 6481 ctgcgaacgg tctatgcgaa gcaggccgac caggcgacca tcgacgcaga gacggacaag 6541 gtcgcccagc gctacaagtc gcagatcgac gcggtgcggc tgcaggcgat ccagcctggc 6601 cgggtcacgc tggccaaggc gctgtcggcg gcgctgggcg ccgactggcg cgcgctgggt 6661 cactcccaat tgatgcagcg ctggaaggat ttcaaggcgg gcaagcgcgg cgcggaaatc 6721 gcgttctatc ccaaggaaca aaccgtgctg gccgccggcg ccggtttgac cctgtccaac 6781 ggggcgatcc acaacggcga gaacgccgcg cagaatcgcg gccggccgga aggcctgaaa 6841 atcggcgcac attcggcgac ttcggtgagc ggctcgttcg acgccttgcg cgacgtgggg 6901 ctggaaaagc ggctggatat cgacgatgcg ctggctgccg tgctcgtgaa tccgcatatt 6961 ttcacgcgga tcggggcggc tcagacatcc cttgccgacg gcgccgccgg gccggcgctg 7021 gcgcgccagg ccaggcaagc gccggagacc gacggcatgg tggatgcgcg agggctgggc 7081 agcgccgatg cgctcgcttc cctggccagc ttggacgcgg cgcaagggct ggaggtatcc 7141 ggcaggcgca atgcgcaggt ggccgacgcc gggctcgccg ggccgagcgc cgtcgcggcg 7201 ccggccgtcg gggcggccga tgtcggcgtg gagcctgtca cgggggacca ggtcgaccag 7261 cctgtcgtgg cggtcgggct cgagcagcct gtcgcgacgg tccgggtcgc gccgccagcc 7321 gtcgcgttgc cgcggccgct gttcgaaacc cgcatcaagt ttatcgacca gagcaaattc 7381 tacggctcgc gttatttctt cgagcagatc ggctacaagc ccgatcgcgc cgcgcgggtg 7441 gcgggcgaca actatttcga taccacgctg gtgcgcgagc aggtgcggcg cgccctgggc 7501 ggctatgaaa gccgcctgcc cgtgcgcggt gtcgcgttgg tggccaagct gatggattcg 7561 gccgggacgg tcggcaaggc gctgggcctg aaggtgggtg tcgcgccgac cgcgcagcag 7621 ctcaagcagg ccgaccgcga tttcgtctgg tacgtggata ccgtgatcga cggccagaag 7681 gttctcgctc cccggctgta cctgaccgag gcgacgcgcc agggcatcac ggatcagtac 7741 gccggcggcg gggcgctgat tgcctccggc ggcgacgtaa ctgtcaatac ggacggccat 7801 gacgtcagtt cggtcaacgg gctgatccag ggcaggagcg tcaaggtgga cgcgggcaag 7861 ggcaaggtcg tggtggccga cagcaagggg gcgggcggcg gcatcgaggc cgatgacgag 7921 gtcgacgtct caggccggga tatcggcatc gagggcggca agctgcgcgg caaggatgtc 7981 aggctcaagg ccgacacggt caaggtcgcg acctcgatgc gttacgacga caagggcagg 8041 ctggcggcgc gcggcgacgg cgccctggat gcgcaaggcg gccagctgca tatcgaggcc 8101 aagcgcctgg agacggccgg cgcgacgctc aagggcggca aggtgaagct ggatgtcgat 8161 gacgtcaagt tgggcggcgt gtacgaggcg gggtccagct acgagaacaa gagctcgacg 8221 ccgctgggca gcctgttcgc catcctgtcg tcgacgacgg aaaccaacca gtcggcacac 8281 gcgaaccatt acggtacgcg catcgaagcc ggtacgctgg aaggaaagat gcagaacctg 8341 gagatcgaag gcggttcggt cgatgccgcg catacggacc tgtccgtggc ccgcgacgcg 8401 aggttcaagg ccgccgcgga tttcgcgcac gccgagcatg agaaggatgt gcgccaactg 8461 tccctgggtg ccaaggtggg ggcgggcggc tacgaggcgg gcttcagcct gggcagcgaa 8521 agcggtctgg aagcgcacgc cggccgcggt atgaccgcgg gcgctgaagt caaggtaggt 8581 tatcgggcat cgcacgaaca gtcctcggaa accgaaaagt cctatcgcaa cgcgaacctc 8641 aatttcggtg gaggctccgt cgaggctggc aatgtcctgg atatcggcgg cgccgacatc 8701 aaccggaacc ggtacggcgg cgccgcgaag gggaacgccg ggaccgagga ggccttgcgc 8761 atgcgcgcca agaaggtcga gtccaccaag tacgtcagcg agcagacgag ccagagctcc 8821 ggctggagcg tggaggtggc atcgacggcc agtgcccgtt ccagcctgct gacggccgcc 8881 acgcgcctgg gcgacagcgt ggcgcagaat gtcgaggacg gccgcgagat ccgcggcgag 8941 ctgatggctg cgcaagtcgc cgcggaggcc acgcaactgg taaccgccga cacggcggcg 9001 gtggcactga gtgccggaat cagcgccgac ttcgacagca gccacagccg ctccacctcg 9061 cagaataccc aatatctggg cggaaacttg tccatcgagg ccaccgaggg cgatgcgacg 9121 ctggtgggcg cgaagttcgg cggtggcgac caggtcagct tgaaggcagc gaagagcgtg 9181 aacctcatgg cggccgaatc gaccttcgaa tcgtactcgg agagccacaa cttccacgcc 9241 tccgccgacg cgaaccttgg cgccaacgcc gtgcagggcg ccgttggcct ggggttgact 9301 gcgggtatgg ggacgtcgca tcagattacc aacgaaaccg gcaagaccta tgccggaacc 9361 tcggtggatg cggcgaacgt gtcgatcgat gcaggcaagg atctgaacct ttccgggtcc 9421 cgcgtgcggg gtaagcatgt tgtcctggat gtcgagggcg atatcaatgc gaccagcaag 9481 caggatgaac gcaactacaa ctccagcggt ggcggttggg acgcctcggc aggggtggcg 9541 attcagaacc gcacgttggt tgcgcccgtg gggtctgccg gcttcaattt caatacggaa 9601 cacgacaatt cgcgcctgac caatgacggg gcggcgggtg tcgttgccag cgacgggttg 9661 acgggccatg tgaaaggcga cgccaacctg accggcgcga ccattgccga tttgtcgggc 9721 aagggcaatc tcaaggtcga cggcgcggtc aacgcgcaga acctgaaaga ctaccgcgac 9781 aaggacggcg gcagcggcgg cctgaacgtg ggcatctcgt cgaccacgct ggcgcccacc 9841 gtgggcgtgg cgttcggcag ggtggccgga gaggattatc aggccgagca gcgcgccacg 9901 attgacgtcg gtcaaaccaa ggatcccgcg cgcctgcagg tcggcggcgg cgtcaagggt 9961 accctcaatc aggacgccgc gcaggccacg gtcgttcagc gcaacaagca ctgggccgga 10021 ggcgggtcgg aattctcggt ggctggcaag tcactgaaga agaagaacca ggtccgcccg 10081 gtggagacgc cgacgccgga tgtcgtggat ggaccgccta gccgtcccac cacgccgccc 10141 gcgtcgccgc agccgatccg cgcgacggtc gaggtcagtt cgccgccgcc ggtgtccgtg 10201 gccacggtcg aagtcgtgcc gcggccgaag gtcgaaacgg ctcagccgct tccgcctcgg 10261 ccggtggcgg cccaggtcgt gccggtgacg cctcccaagg tggaggtcgc caaggtggaa 10321 gtcgtgccgc ggccgaaggt tgaaacggct cagccgcttc cgccccggcc ggtggtggcc 10381 gagaaggtga cgacgccggc ggtccagccc cagcttgcca aggtggagac ggtgcagccg 10441 gtgaagcccg aaaccaccaa gccgttgccc aagccgctgc cggtggcgaa ggtgacgaaa 10501 gcgccgccgc cggttgtgga gaccgcccag ccgctgccgc cggtcaagcc acagaaggcg 10561 acccccggcc ccgtggctga ggtgggcaag gctacggtca cgacggtgca ggtgcagagt 10621 gcgccgccca agccggcccc ggtggccaag cagcccgcgc ctgcaccgaa gcccaagccc 10681 aagcccaagc ccaaggccga gcgtccgaag ccgggcaaaa cgacgccctt gagcgggcgc 10741 cacgtggtgc aacagcaggt gcaggtcttg cagcggcaag cgagtgacat caacaacacc 10801 aagagcctgc ctggcgggaa gctgcccaag ccggtcaccg tgaagctgac cgacgagaac 10861 ggcaagccgc agacgtatac gatcaaccgg cgcgaggatc tgatgaagct caacggcaag 10921 gtgctgtcca ccaagacgac actgggcctg gagcagacct tccgcctgcg gtcgaggata 10981 tcggcggcaa gaactaccgg gtcttctatg aaaccaacaa ataggtagtc gcggcctgcc 11041 gcggctcggc gcatggggat tcgcagggtt ctcatgcgcc ggccaatgcc ggatagcggt 11101 gcaattgccg accatttcgc gcaccgcgct caaggacgta gggtcgacgg caggcgggac 11161 agtttttgac gtgaaactga ccgagtgtcc gcaggcattg aatggtcagc aagtgggatt 11221 gttcttcgaa tctggtggca cggttgacta tacgtcggga aacctgtttg cgtatcgggc 11281 cgatagtcag ggcgtcgaac aggctaccgc agagcgaaag ccgacaacgt gcaagccaat 11341 ctggatggtt ccgctattca tttgggccgc aacaagggtg cgcaggctgc tcagacgttt 11401 ctggtatcgc agacggctgg gtcgtcgacg tacggggcga ccctgcgcta tctggcatgc 11461 tacatccgtt cgggcgctgg ttccattgtt gcggggaatc tccgcagtca ggtggggttc 11521 tccgtgatgt atccgtagcc cgtgaaagag gggtcaccca ctgcgggggg ccccggtacg 11581 ggatggtcgg cttgtcacga gattcttgtt ttccatttct ttcttttcac tcggtcgcag 11641 cgccggcttg atgcatgcaa agcatcgata gctacgaacg gccgcgattc ttgaatcatg 11701 aatacatacg cttgtgacgg ggcgctcgcg agagccggcc ccagggatgg tttacgcctg 11761 catttacggt aaagcggcaa ggcggcatgg cgcgctggcg gcggctgggc gtcgcggcgc 11821 tgggccatgc //