GenBank-Updates@genbank.bio.net (01/25/91)
LOCUS PVFPVC 5124 bp ds-DNA VRL 25-JAN-1991
DEFINITION Feline panleukopenia virus NS-1 protein and capsid proteins VP-1
and VP-2 genes, complete cds.
ACCESSION M38246
KEYWORDS NS1 protein; capsid protein VP1; capsid protein VP2.
SOURCE Feline panleukopenia virus DNA.
ORGANISM Feline panleukopenia virus
Viridae; ss-DNA nonenveloped viruses; Parvoviridae; Parvovirus;
Feline parvovirus.
REFERENCE 1 (bases 1 to 5124)
AUTHORS Parrish,C.R.
TITLE Infectious molecular clones of Canine parvovirus and Feline..
JOURNAL Unpublished (1990)
STANDARD simple staff_entry
COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)]
kindly submitted
by C.R.Parrish, 27-AUG-1990.
James A. Baker Institute
New York State College of Veterinary Medicine
Cornell University
Ithaca, NY 14853
FEATURES Location/Qualifiers
CDS 273..2279
/codon_start=273
/product="NS1 protein"
CDS 2286..4541
/codon_start=2286
/product="capsid protein VP1"
CDS 2787..4541
/codon_start=2787
/product="capsid protein VP2"
BASE COUNT 1816 a 835 c 1036 g 1437 t
ORIGIN map position 1-100
1 atcattcttt agaaccaact gaccaagttc acgtacgtat gacgtgatga cgcgcgctgc
61 gcgcgctgcc tacggcagtc acacgtcata cgtacgctcc ttggtcagtt ggttctaaag
121 aatgataggc ggtttgtgtg tttaaacttg ggcgggaaaa ggtggcgggc taattgtggg
181 cgtggttaaa ggtataaaag acaaaccata gaccgttact gacattcgct tcttgtcttt
241 gacagagtga acctcactta ctttgactaa ccatgtctgg caaccagtat actgaggaag
301 ttatggaggg agtaaattgg ttaaagaaac atgcagaaga tgaagcattt tcgtttgttt
361 ttaaatgtga caacgtccaa ctaaatggaa aggatgttcg ctggaacaac tataccaaac
421 caattcaaaa tgaagagcta acatctttaa ttagaggagc acaaacagca atggatcaaa
481 ccgaagaaga agaaatggac tgggaatcgg aagttgatag tctcgccaaa aagcaagtac
541 aaacttttga tgcattaatt aaaaaatgtc tttttgaagt atttgtttct aaaaatatag
601 aaccaaatga atgtgtttgg tttattcaac atgaatgggg aaaagatcaa ggctggcatt
661 gtcatgtttt acttcatagt aagaacttac aacaagcaac tggtaaatgg ctacgcagac
721 aaatgaatat gtattggagt agatggttgg tgactctttg ttcagtaaac ttaacaccaa
781 ctgaaaagat taagctcaga gaaattgcag aagatagtga atgggtgact atattaacat
841 acagacataa gcaaacaaaa aaagactatg ttaaaatggt tcattttgga aacatgatag
901 catattactt tttaacaaag aaaaaaattg tccacatgac aaaagaaagt ggctattttt
961 taagtactga ttctggttgg aaatttaact ttatgaagta tcaagacaga catactgtca
1021 gcacacttta cactgaacaa atgaaaccag aaaccgttga aaccacagtg acgacagcac
1081 aggaaacaaa gcgcgggaga attcaaacta aaaaggaagt gtcaatcaaa tgtactttgc
1141 gggacttggt tagtaaaaga gtaacatcac ctgaagactg gatgatgtta caaccagata
1201 gttatattga aatgatggca caaccaggag gtgaaaatct tttaaaaaat acacttgaaa
1261 tttgtacttt gactttagca agaacaaaaa cagcatttga attaatactt gaaaaagcag
1321 ataatactaa actaactaac tttgatcttg caaattctag aacatgtcaa atttttagaa
1381 tgcacggatg gaattggatt aaagtttgtc acgctatagc atgtgtttta aatagacaag
1441 gtggtaaaag aaatacagtt ctttttcatg gaccagcaag tacaggaaaa tctattattg
1501 ctcaagccat agcacaagct gtgggtaatg ttggttgtta taatgcagca aatgtaaatt
1561 ttccatttaa tgactgtacc aataaaaatt taatttgggt tgaagaagct ggtaactttg
1621 gtcaacaagt taatcaattt aaagcaattt gttctggaca aacaattaga attgatcaaa
1681 aaggtaaagg aagtaagcaa attgaaccaa ctccagtaat tatgacaact aatgaaaata
1741 taacaattgt aagaattgga tgtgaagaaa gacctgaaca tacacaacca ataagagaca
1801 gaatgttgaa cattaagtta gtatgtaagc ttccaggaga ctttggtttg gttgataaag
1861 aagaatggcc tttaatatgt gcatggttag ttaaacatgg ttatcaatca accatggcta
1921 actacacaca tcattgggga aaagtaccag agtgggatga aaactgggcg gagcctaaaa
1981 tacaagaagg tataaattca ccaggttgca aagacttaga gacacaagcg gcaagcaatc
2041 ctcagagtca agaccacgtt ctaactcctc tgactccgga cgtagtggac cttgcactgg
2101 aaccgtggag tactccagat acgcctattg cagaaactgc aaatcaacaa tcaaaccaac
2161 ttggcgttac tcacaaagac gtgcaagcga gtccgacatg gtccgaaata gaggcagacc
2221 tgagagccat ttttacttct gaacaattgg aagaagattt tcgagacgac ttggattaag
2281 gtacgatggc acctccggca aagagagcca ggagaggtaa gggtgtgtta gtaaagtggg
2341 gggaggggaa aaatttaata acttaactaa gtatgtgttt tcttatagga cttgtgcctc
2401 caggttataa atatcttggg cctgggaaca gtcttgacca aggagaacca actaaccctt
2461 ctgacgccgc tgcaaaagaa cacgacgaag cttacgctgc ttatcttcgc tctggtaaaa
2521 acccatactt atacttttcg ccagcagatc aacgctttat agatcaaact aaggacgcta
2581 aagattgggg ggggaaaata ggacattatt tttttagggc taaaaaagca attgctccag
2641 tattaactga tacaccagat catccatcaa catcaagacc aacaaaacca actaaaagaa
2701 gtaaaccacc acctcatatt ttcatcaatc ttgcaaaaaa aaaaaaagcc ggtgcaggac
2761 aagtaaaaag agacaatctt gcaccaatga gtgatggagc agttcaacca gacggtggtc
2821 aacctgctgt cagaaatgaa agagctacag gatctgggaa cgggtctgga ggcgggggtg
2881 gtggtggttc tgggggtgtg gggatttcta cgggtacttt caataatcag acggaattta
2941 aatttttgga aaacgggtgg gtggaaatca cagcaaactc aagcagactt gtacatttaa
3001 atatgccaga aagtgaaaat tataaaagag tagttgtaaa taatatggat aaaactgcag
3061 ttaaaggaaa catggcttta gatgatattc atgtacaaat tgtaacacct tggtcattgg
3121 ttgatgcaaa tgcttgggga gtttggttta atccaggaga ttggcaacta attgttaata
3181 ctatgagtga gttgcattta gttagttttg aacaagaaat ttttaatgtt gttttaaaga
3241 ctgtttcaga atctgctact cagccaccaa ctaaagttta taataatgat ttaactgcat
3301 cattgatggt tgcattagat agtaataata ctatgccatt tactccagca gctatgagat
3361 ctgagacatt gggtttttat ccatggaaac caaccatacc aactccatgg agatattatt
3421 ttcaatggga tagaacatta ataccatctc atactggaac tagtggcaca ccaacaaatg
3481 tatatcatgg tacagatcca gatgatgttc aattttatac tattgaaaat tctgtgccag
3541 tacacttact aagaacaggt gatgaatttg ctacaggaac attttttttt gattgcaaac
3601 catgtagact aacacataca tggcaaacaa atagagcatt gggcttacca ccatttttaa
3661 attctttgcc tcaatctgaa ggagctacta actttggtga tataggagtt caacaagata
3721 aaagacgtgg tgtaactcaa atgggaaata cagactatat tactgaagct actattatga
3781 gaccagctga ggttggttat agtgcaccat attattcttt tgaagcgtct acacaagggc
3841 catttaaaac acctattgca gcaggacggg ggggagcgca aacagatgaa aatcaagcag
3901 cagatggtga tccaagatat gcatttggta gacaacatgg tcaaaaaact actacaacag
3961 gagaaacacc tgagagattt acatatatag cacatcaaga tacaggaaga tatccagaag
4021 gagattggat tcaaaatatt aactttaacc ttcctgtaac aaatgataat gtattgctac
4081 caacagatcc aattggaggt aaaacaggaa ttaactatac taatatattt aatacttatg
4141 gtcctttaac tgcattaaat aatgtaccac cagtttatcc aaatggtcaa atttgggata
4201 aagaatttga tactgactta aaaccaagac ttcatgtaaa tgcaccattt gtttgtcaaa
4261 ataattgtcc tggtcaatta tttgtaaaag ttgcgcctaa tttaacgaat gaatatgatc
4321 ctgatgcatc tgctaatatg tcaagaattg taacttattc agatttttgg tggaaaggta
4381 aattagtatt taaagctaaa ctaagagcat ctcatacttg gaatccaatt caacaaatga
4441 gtattaatgt agataaccaa tttaactatg taccaaataa tattggagct atgaaaattg
4501 tatatgaaaa atctcaacta gcacctagaa aattatatta atatacttac tatgttttta
4561 tgtttattac atatcaacta gcacctagaa cattatatta atatacttac tatgttttta
4621 tgtttattac acattatttt aagattaatt aaattacagc atagaaatat tgtacttgta
4681 tttgatatag gatttagaag gtttgttata tggtatacaa taactgtaag aaatagaaga
4741 acatttagat catagttagt agtttgtttt ataaaatgta attgtaaact attaatgtat
4801 gttgttatgg tgtgggtggt tggttggttt gcccttagaa tatgttaagg accaaaaaaa
4861 tcaataaaag acatttaaaa ctaaatggtc tcgtatactg tctataaggt gaactaacct
4921 taccataagt atcaatctgt ctttaagggg ggggtgggtg ggagatgcac aatatcagta
4981 gactgactgg cctggttggt tgctctgctt aatcaaccag accgcgtagc ggtctggttg
5041 attaagcgca accaaccagg ccagtcagtc tactgatatt gtgcatctcc cacccacccc
5101 ccccttaaag acagattgat actt
//