GenBank-Updates@genbank.bio.net (12/01/90)
LOCUS LEIHSP83 3577 bp ds-DNA INV 01-DEC-1990
DEFINITION Leishmania mexicana heat shock protein 83 gene, complete cds.
ACCESSION M34292
KEYWORDS heat shock protein 83.
SOURCE Leishmania mexicana amazonensis (isolate MHOM/BR/77/LTB0016)
promastigote DNA.
ORGANISM Leishmania mexicana
Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
Kinetoplastida; Trypanosomatina; Trypanosomatidae.
REFERENCE 1 (bases 1 to 3577)
AUTHORS Shapria,M. and Pedraza,G.
TITLE Sequence analysis and transcriptional activation of heat shock
protein 83 of Leishmania mexicana amazonensis
JOURNAL Mol. Biochem. Parasitol. 42, 247-256 (1990)
STANDARD simple staff_entry
COMMENT Draft entry and computer-readable sequence for [1] kindly ]
submitted by M.Shapira, 16-MAY-1990.
FEATURES from to/span description
pept 1 1299 heat shock protein 83, exon 1
2771 3577 heat shock protein 83, exon 2
intron 1300 2770 HSP83 intron (no splice consensus)
BASE COUNT 726 a 1100 c 1122 g 629 t
ORIGIN
1 atgacggaga cgttcgcgtt ccaggcggag atcaatcagt tgatgtcact gatcatcaac
61 accttctact cgaacaagga gatcttcctg cgcgacgtga tcagcaatgc gtcggatgcg
121 tgcgacaaga tccgctacca gagcctgacg gacccgtcgg tgctgggcga cgcgactcgc
181 ctgtgcgtcc gcgtggtgcc ggacaaggag aacaagacgc tgacggtgga ggataacggc
241 atcggtatga ccaaggcgga cctcgtgaac aacctgggca cgatcgcgcg ctccggcacg
301 aaggcgttca tggaggcgct ggaggccggc gcggacatga gcatgatcgg ccagttcggt
361 gtcgggttct actcggcgta ccttgtggcg gaccgcgtga cggtgacgtc gaagaacaac
421 tcggacgagg tgtacgtatg ggagtcgtcc gctggcggca cgttcacgat cacgagcgcg
481 ccggagtcgg acatgaagct gccggcacgg atcacgctgc acctcaagga ggaccagctg
541 gagtacctgg aggcgcgccg cctgaaggag ctgatcaaga agcactccga gttcatcggc
601 tacgacatcg agctgatggt ggagaagacg acggagaagg aggtgacgga cgaggacgag
661 gaggaggcga agaaggccga cgaggacggc gaggagccga aggtggagga ggtgacggag
721 ggcgaagagg gcaagaagaa gaagacgaag aaggtgaagg aggtgacgaa ggagtacgag
781 gtccagaaca agcacaagcc gctctggacg cgcgacccga aggacgtgac gaaggaggag
841 tacgccgcct tctacaaggc catctccaac gactgggagg acccgccggc gacgaagcac
901 ttctctgtgg agggccagct ggagttccgc gcgatcatgt tcgtgccgaa gcgcgcgccg
961 ttcgacatgt tggagccgaa caagaagcgc aacaacatca agctgtacgt gcgccgcgtg
1021 ttcatcatgg acaactgcga ggacctgtgc ccggactggc tcggcttcgt gaagggcgtt
1081 gtggacagcg aggacctgcc gctgaacatc tcgcgcgaga acctgcagca gaacaagatc
1141 ctgaaggtga tccgcaagaa catcgtgaag aagtgcctgg aaatgttcga ggaggtggcg
1201 gagaacaagg aggactacaa gcagttctac gagcagttcg gcaagaacat caagctgggc
1261 atccacgagg acacggcgaa ccgcaagaag ctgatggagt gccggtacgg cagcggcaca
1321 cgcacacagt gctcgtatct tctccggctt gcgtgcatgc tgccttcgca aagctgcgga
1381 cgcggcgctc tggagccttg ccccgcgcac tgctctttac atagcccgac gtgagggcac
1441 ttcgcgggca gtgctgcggc ctcgtgtggg atcgcgtcag gactgaagga gagcgaagcc
1501 cggggctcgg tgtggagaag gagcgttcgt ccaagtagcc ccgttgcgag agtgtgtgac
1561 ccatgccagt gcacctcact gccctcccgc ttccccggcc acttgggcac tcacatcccc
1621 ctccccttcc cttctccccc cgtactcccc cctctctctt tctcgcatcc tctgccctct
1681 caccggcgcg gcgcaccggc gctcttttcc gttttgattt tgcgtgtccc aacacacagt
1741 tggatcgttt ttcttctctc cctaacgagt cgcgacgagg tcgatgctgc ccgagctcac
1801 ccccacccct ctgcgcctgc gtcactgctt gtcagagccg tgtgctctcg cctcccactc
1861 tggagcgtcc tctccgcgcg tgcgactccc ttccgtctct ctcgcccgtg ggagcgtttg
1921 acgaggggag gccgtgcgcc gcctctctct gcatgcggcg tggcagatcg ggatggggat
1981 gggtgctgag gtggtggcgg cgtccgctcc cgcgatggct ttgattttgt attgctgctg
2041 tggccctggc acacgcacgc gcgcacgcac aggccacccg cacagcctca tccacatgcg
2101 gaggcgtttt ctctgtgttc ccttgtgcgc gtgcgtgtgc ctgcgtgtgt acgtgtgcat
2161 gggcgcacgg cggcgccgtc agcgaaggcg gaggcacaaa gagagggaaa acgacacgcg
2221 cctgcgcctc acggtttccg tgctgcacgc gagcgcaacg aagcgtgggc gcttgttctc
2281 cctccaatgc aaagcaatcc ccccgctcgg ttgcctacac gtcctgcacg agagggacga
2341 gcacgtctgc gcagcggctg tgctccatcc ccaccccctt ccccatgtga cgctctaact
2401 tccatctccg tcgccctccc cctctgtacc tcatcaacac acggacttta cagatcaccg
2461 acccgcccac cacgatagag ctcttcggtg cgcactttcc ttccctcgca ctctctcttc
2521 cctacacctc tccctcgatt gctttgggcc gcactgagta agttctctca ccagaggcac
2581 ccaactgtcg ttataaaaga agcatcacca ggagccgctg cacagaagga gtcactccga
2641 cacgcacacg cacgcgctcc tctcttcccc tgcctccctc gcacctgacc ctattgttaa
2701 cccccctccc tttctcccca accattatta ttacctgcac tccctccccc ctaccacccc
2761 ccgctgcagc ctgctgcgct tctacagcac cgagtctggc gaggtgatga cgacgctgaa
2821 ggactacgtg acgcgcatga aggcggagca gaattcgatc tactacatca ccggcgacag
2881 caagaagaag ctggagtcgt cgccgttcat tgagcaggcg aagcgccgcg ggtttgaggt
2941 gctgttcatg acggagccgt acgacgagta cgtgatgcag caggtgaagg acttcgagga
3001 caagaagttc gcgtgcctga cgaaggaggg cgtgcacttc gaggagtcgg aggaggagaa
3061 gcggcagcgc gaggaggaga aggcgacgtg cgagaagctg tgcaaaacga tgaaggaggt
3121 gctgggcgac aaggtggaga aggtgaccgt gtcggagcgc ctgtcgacgt cgccgtgcat
3181 cctggtgacg tcggagttcg ggtggtcggc gcacatggag cagatgatgc gcaaccaggc
3241 gctgcgcgac tccagcatgg cgcagtacat gatgtccaag aagacgatgg agctcaaccc
3301 caaacacccc atcatcaagg agctgcgccg ccgcgtggag gcggacgaga acgacaaggc
3361 cgtgaaggac ctcgtcttcc tgctgttcga cacgtcgctg ctcacgtccg gcttccagct
3421 ggaggacccc acgtacgccg agcgcatcaa ccgcatgatc aagctcggtc tgtcgctcga
3481 cgaggaggag gaggaggagg cagtcgaggc agcggtggcc gagacagccc ccgcggaggt
3541 cactgccggc acatccagca tggagctggt ggactga
LOCUS HECRR16S 1444 bp ss-rRNA BCT 10-AUG-1990
DEFINITION Helicobacter felis 16S rRNA.
ACCESSION M37643
KEYWORDS 16S rRNA.
SOURCE Helicobacter felis (strain DS3) rRNA.
ORGANISM Helicobacter felis
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Aerobic/microaerophilic, motile, helical/vibrioid bacteria.
REFERENCE 1 (sites)
AUTHORS Paster,B.J., Lee,A., Fox,J.G., Dewhirst,F.E., Tordoff,L.A., Fraser,
G.J., O'Rourke,J.L., Taylor,N.S. and Ferrero,R.
TITLE The phylogeny of Helicobacter felis sp. nov., Helicobacter
mustelae, and related bacteria.
JOURNAL Unpublished (0)
STANDARD full staff_review
COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)]
kindly submitted
by B.J.Paster, 08-AUG-1990.
Forsyth Dental Center
140 Fenway
Boston, MA 02115
FEATURES from to/span description
rRNA 1 1444 16S rRNA
BASE COUNT 380 a 313 c 419 g 320 t 12 others
ORIGIN
1 ctttatggag agtttgatcc tggctcagag tgaacgctgg cggcgtgcct aatacatgca
61 agtcgaacga tgaagcctag cttgctaggt ggattagtgg cgcacgggtg agtaacgcat
121 agataacatg ccctttagtt tgggatagcc actagaaatg gtgattaata ccaaatactc
181 ctacggggga aagatttatc gctaaaggat tggtctatgt cctatcagct tgttggtgag
241 gtaaaggctc acnnaggcta tgacgggtat ccggcctgag agggtgaacg gacacactgg
301 aactgagaca cggtccagac tcctacggga ggcagcagta gggaatattg ctcaatgggc
361 gcaagcctga agcagcaacg ccgcgtggag gatgaaggtt ttaggattgt aaactccttt
421 tgtcagagaa gataatgacg gtatctgacg aataagcacc ggctaactcc gtgccagcag
481 ccgcggtaat acggagggtg caagcgttac tcggaatcac tgggcgtaaa gagtgcgtag
541 gcggggttgt aagtcagatg tgaaatccta tggcttaacc atagaactgc atttgaaact
601 acaactctgg agtgtgggag aggtaggtgg aattcttggt gtaggggtaa aatccgtaga
661 gatcaagagg aatactcatt gcgaaggcga cctgctggaa caatactgac gctgatgcrc
721 gaaagcgtgg ggagcaaaca ggattagata ccctggtagt ccacgcccta aacgatggat
781 gctmgttgtt ggggggcttg tcctcccagt aatgcagcta acgccttaag catcccgcct
841 ggggagtacg gtcgcaagat taaaactcaa aggaatagac ggggacccgc acaagcggtg
901 gagcangtgg tttaattcga nnnnacacga agaaccttac ctaggcttga cattgaagga
961 atcccctaga aataggggag tgtctagctt gctagaccct gaaaacaggt gctgcacggc
1021 tgtcgtcagc tcgtgtcgtg agatgttggg ttaagtcccg caacgagcgc aaccctcttt
1081 cttagttgct aacaggttnt gctgagctct ctaagaatac tgcctgcgta agcaggagga
1141 aggtgaggac gacgtcaagt catcatggcc cttacgccta gggctacaca cgtgctacaa
1201 tggggtgtac aaagagatgc aatgccgcga ggctgagcca atcttaaaaa catctctcag
1261 ttcggattgc aggctgcaac tcgcctgcat gaagctggaa tcgctagtaa tcgcaaatca
1321 gccatgttgc ggtgaatacg ttcccgggtc ttgtactcac cgnncgtcac accatgggag
1381 ttgtgtttgc cttaagtcag gatgctaaag tagctactgc ccacggcaca cacagcgact
1441 gggg
//GenBank-Updates@genbank.bio.net (12/01/90)
LOCUS HECRR16SA 1443 bp ss-rRNA BCT 01-DEC-1990
DEFINITION Helicobacter felis 16S rRNA.
ACCESSION M57398 M35047 M37642 M42976 M42977
KEYWORDS 16S rRNA.
SOURCE Helicobacter felis (strain CS1, ATCC 49179) 16S rRNA.
ORGANISM Helicobacter felis
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Aerobic/microaerophilic, motile, helical/vibrioid bacteria.
REFERENCE 1 (bases 1 to 1443)
AUTHORS Paster,B.J., Lee,A., Fox,J.G., Dewhirst,F.E., Tordoff,L.A.,
Fraser,G.J., O'Rourke,J.L., Taylor,N.S. and Ferrero,R.
TITLE The phylogeny of Helicobacter felis sp. nov., Helicobacter
mustelae, and related bacteria
JOURNAL Unpublished (0)
STANDARD full staff_entry
REFERENCE 2 (bases 9 to 1443)
AUTHORS Paster,B.J., Lee,A., Dewhirst,F.E., Fox,J.G., Tordoff,L.A. and
Ferrero,R.
TITLE The phylogeny of Helicobacter felis sp. nov., a spiral-shaped
bacterium isolated from the gastric mucosa of the cat, Helicobacter
mustelae, and related bacteria
JOURNAL Unpublished (1990)
STANDARD full staff_review
COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)]
kindly submitted by B.J.Paster, 08-AUG-1990.
Forsyth Dental Center
140 Fenway
Boston, MA 02115
FEATURES from to/span description
rRNA 1 1443 16S rRNA
BASE COUNT 371 a 309 c 416 g 317 t 30 others
ORIGIN
1 tttatggaga gtttgatcct ggctcagagt gaacgctggc ggcgtgccta atacatgcaa
61 gtcgaacgat gaagcctagc ttgctaggcg gattagtggc gcacgggtga gtaacgcata
121 gatgacatgc cctttagttt gggatagcca ctagaaatgg tgattaatac caaatactcc
181 tacgggggaa agatttatcg ctaaaggatt ggtctatgtc ctatcagctt gttggtgagg
241 taaaggctca cnnaggctat gacgggtatc cggcctgaga gggtgaacgg acacactgga
301 actgagacac ggtccagact ccnncgggag gcagcagtag ggaatattgc tcaatgggcg
361 caagcctgaa gcagcaacgc cgcgtggagg atgaaggttt taggattgta aactcctttt
421 gtcagagaag ataatgacgg tatctgacga ataagcaccg gctanctccg tgccagcagc
481 cgcggtaata cggagggtgc nagcgttact cggaatcnct gggcgtaaag agtgcgtagg
541 cggggttgta agtcagatgt gaaatcctat ggcttaacca tagaactgca tttgaaacta
601 caactctgga gtgtgggaga ggtaggtgga attcttggtg taggggtaaa atccgtagag
661 atcaagagga atactcattg cgaaggcgac ctgctggaac aatactgacg ctgatgcncg
721 aaagcgtggg gagcaaacag gattagatac cctggtagtc cacgccctaa acgatggatg
781 ctagttgttg gggggcttgt cctcccagta atgcagctaa cgccttaagc atcccgcctg
841 gggagtacgg tcgcaagatt aaaactcaaa ggaatagacg gggacccgca caagcnnnnn
901 nnnnngtggt ttaattcgan nnnnnncgaa gaaccttacc taggcttgac attgaangaa
961 tctgctagaa atagtggagt gtctagcttg ctagaccctg aaaacaggtg ctgcacggct
1021 gtcgtcagct cgtgtcgtga gatgttgggt taagtcccgc aacgagcgca accctctttc
1081 ttagttgcta acaggtagtg ctgagctctc taagaatact gcctgcgtaa gcaggaggaa
1141 ggtgaggacg acgtcaagtc atcatggccc ttacgcctag ggctacacac gtgctacaat
1201 ggggtgcaca aagagatgca atgccgcgag gttgagccaa tcttaaaaac nnctctcagt
1261 tcggattgca ggctgcaact cgcctgcatg aagctggaat cgctagtaat cgcaaatcag
1321 ccatgttgcg gtgaatacgt tcccgggtct tgtactcacc gnncgtcaca ccatgggagt
1381 tgtgtttgcc ttaagtcagg atgctaaggt agctactgcc cacggcacac acagcgactg
1441 ggg
//GenBank-Updates@genbank.bio.net (12/01/90)
LOCUS HECRR16SB 1444 bp ss-rRNA BCT 01-DEC-1990
DEFINITION Helicobacter felis 16S rRNA.
ACCESSION M37643
KEYWORDS 16S rRNA.
SOURCE Helicobacter felis (strain DS3) rRNA.
ORGANISM Helicobacter felis
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Aerobic/microaerophilic, motile, helical/vibrioid bacteria.
REFERENCE 1 (bases 1 to 1444)
AUTHORS Paster,B.J., Lee,A., Fox,J.G., Dewhirst,F.E., Tordoff,L.A.,
Fraser,G.J., O'Rourke,J.L., Taylor,N.S. and Ferrero,R.
TITLE The phylogeny of Helicobacter felis sp. nov., Helicobacter
mustelae, and related bacteria
JOURNAL Unpublished (0)
STANDARD full staff_review
COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)]
kindly submitted by B.J.Paster, 08-AUG-1990.
Forsyth Dental Center
140 Fenway
Boston, MA 02115
FEATURES from to/span description
rRNA 1 1444 16S rRNA
BASE COUNT 380 a 313 c 419 g 320 t 12 others
ORIGIN
1 ctttatggag agtttgatcc tggctcagag tgaacgctgg cggcgtgcct aatacatgca
61 agtcgaacga tgaagcctag cttgctaggt ggattagtgg cgcacgggtg agtaacgcat
121 agataacatg ccctttagtt tgggatagcc actagaaatg gtgattaata ccaaatactc
181 ctacggggga aagatttatc gctaaaggat tggtctatgt cctatcagct tgttggtgag
241 gtaaaggctc acnnaggcta tgacgggtat ccggcctgag agggtgaacg gacacactgg
301 aactgagaca cggtccagac tcctacggga ggcagcagta gggaatattg ctcaatgggc
361 gcaagcctga agcagcaacg ccgcgtggag gatgaaggtt ttaggattgt aaactccttt
421 tgtcagagaa gataatgacg gtatctgacg aataagcacc ggctaactcc gtgccagcag
481 ccgcggtaat acggagggtg caagcgttac tcggaatcac tgggcgtaaa gagtgcgtag
541 gcggggttgt aagtcagatg tgaaatccta tggcttaacc atagaactgc atttgaaact
601 acaactctgg agtgtgggag aggtaggtgg aattcttggt gtaggggtaa aatccgtaga
661 gatcaagagg aatactcatt gcgaaggcga cctgctggaa caatactgac gctgatgcrc
721 gaaagcgtgg ggagcaaaca ggattagata ccctggtagt ccacgcccta aacgatggat
781 gctmgttgtt ggggggcttg tcctcccagt aatgcagcta acgccttaag catcccgcct
841 ggggagtacg gtcgcaagat taaaactcaa aggaatagac ggggacccgc acaagcggtg
901 gagcangtgg tttaattcga nnnnacacga agaaccttac ctaggcttga cattgaagga
961 atcccctaga aataggggag tgtctagctt gctagaccct gaaaacaggt gctgcacggc
1021 tgtcgtcagc tcgtgtcgtg agatgttggg ttaagtcccg caacgagcgc aaccctcttt
1081 cttagttgct aacaggttnt gctgagctct ctaagaatac tgcctgcgta agcaggagga
1141 aggtgaggac gacgtcaagt catcatggcc cttacgccta gggctacaca cgtgctacaa
1201 tggggtgtac aaagagatgc aatgccgcga ggctgagcca atcttaaaaa catctctcag
1261 ttcggattgc aggctgcaac tcgcctgcat gaagctggaa tcgctagtaa tcgcaaatca
1321 gccatgttgc ggtgaatacg ttcccgggtc ttgtactcac cgnncgtcac accatgggag
1381 ttgtgtttgc cttaagtcag gatgctaaag tagctactgc ccacggcaca cacagcgact
1441 gggg
//GenBank-Updates@genbank.bio.net (01/31/91)
LOCUS HECRR16SA 1443 bp ss-rRNA BCT 31-JAN-1991
DEFINITION Helicobacter felis 16S rRNA.
ACCESSION M57398 M35047 M37642 M42976 M42977
KEYWORDS 16S rRNA.
SOURCE Helicobacter felis (strain CS1, ATCC 49179) 16S rRNA.
ORGANISM Helicobacter felis
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Aerobic/microaerophilic, motile, helical/vibrioid bacteria.
REFERENCE 1 (bases 1 to 1443)
AUTHORS Paster,B.J., Lee,A., Fox,J.G., Dewhirst,F.E., Tordoff,L.A.,
Fraser,G.J., O'Rourke,J.L., Taylor,N.S. and Ferrero,R.
TITLE The phylogeny of Helicobacter felis sp. nov., Helicobacter
mustelae, and related bacteria.
JOURNAL Unpublished (0)
STANDARD full staff_entry
REFERENCE 2 (bases 9 to 1446)
AUTHORS Paster,B.J., Lee,A., Dewhirst,F.E., Fox,J.G., Tordoff,L.A. and
Ferrero,R.
TITLE The phylogeny of Helicobacter felis sp. nov., a spiral-shaped
bacterium isolated from the gastric mucosa of the cat, Helicobacter
mustelae, and related bacteria
JOURNAL Unpublished (1990)
STANDARD full staff_review
COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)]
kindly submitted
by B.J.Paster, 08-AUG-1990.
Forsyth Dental Center
140 Fenway
Boston, MA 02115
FEATURES Location/Qualifiers
rRNA 1..1443
/product="16S ribosomal RNA"
BASE COUNT 371 a 309 c 416 g 317 t 30 others
ORIGIN
1 tttatggaga gtttgatcct ggctcagagt gaacgctggc ggcgtgccta atacatgcaa
61 gtcgaacgat gaagcctagc ttgctaggcg gattagtggc gcacgggtga gtaacgcata
121 gatgacatgc cctttagttt gggatagcca ctagaaatgg tgattaatac caaatactcc
181 tacgggggaa agatttatcg ctaaaggatt ggtctatgtc ctatcagctt gttggtgagg
241 taaaggctca cnnaggctat gacgggtatc cggcctgaga gggtgaacgg acacactgga
301 actgagacac ggtccagact ccnncgggag gcagcagtag ggaatattgc tcaatgggcg
361 caagcctgaa gcagcaacgc cgcgtggagg atgaaggttt taggattgta aactcctttt
421 gtcagagaag ataatgacgg tatctgacga ataagcaccg gctanctccg tgccagcagc
481 cgcggtaata cggagggtgc nagcgttact cggaatcnct gggcgtaaag agtgcgtagg
541 cggggttgta agtcagatgt gaaatcctat ggcttaacca tagaactgca tttgaaacta
601 caactctgga gtgtgggaga ggtaggtgga attcttggtg taggggtaaa atccgtagag
661 atcaagagga atactcattg cgaaggcgac ctgctggaac aatactgacg ctgatgcncg
721 aaagcgtggg gagcaaacag gattagatac cctggtagtc cacgccctaa acgatggatg
781 ctagttgttg gggggcttgt cctcccagta atgcagctaa cgccttaagc atcccgcctg
841 gggagtacgg tcgcaagatt aaaactcaaa ggaatagacg gggacccgca caagcnnnnn
901 nnnnngtggt ttaattcgan nnnnnncgaa gaaccttacc taggcttgac attgaangaa
961 tctgctagaa atagtggagt gtctagcttg ctagaccctg aaaacaggtg ctgcacggct
1021 gtcgtcagct cgtgtcgtga gatgttgggt taagtcccgc aacgagcgca accctctttc
1081 ttagttgcta acaggtagtg ctgagctctc taagaatact gcctgcgtaa gcaggaggaa
1141 ggtgaggacg acgtcaagtc atcatggccc ttacgcctag ggctacacac gtgctacaat
1201 ggggtgcaca aagagatgca atgccgcgag gttgagccaa tcttaaaaac nnctctcagt
1261 tcggattgca ggctgcaact cgcctgcatg aagctggaat cgctagtaat cgcaaatcag
1321 ccatgttgcg gtgaatacgt tcccgggtct tgtactcacc gnncgtcaca ccatgggagt
1381 tgtgtttgcc ttaagtcagg atgctaaggt agctactgcc cacggcacac acagcgactg
1441 ggg
//GenBank-Updates@genbank.bio.net (01/31/91)
LOCUS HECRR16SB 1444 bp ss-rRNA BCT 31-JAN-1991
DEFINITION Helicobacter felis 16S rRNA.
ACCESSION M37643
KEYWORDS 16S rRNA.
SOURCE Helicobacter felis (strain DS3) rRNA.
ORGANISM Helicobacter felis
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Aerobic/microaerophilic, motile, helical/vibrioid bacteria.
REFERENCE 1 (bases 1 to 1444)
AUTHORS Paster,B.J., Lee,A., Fox,J.G., Dewhirst,F.E., Tordoff,L.A.,
Fraser,G.J., O'Rourke,J.L., Taylor,N.S. and Ferrero,R.
TITLE The phylogeny of Helicobacter felis sp. nov., Helicobacter
mustelae, and related bacteria.
JOURNAL Unpublished (0)
STANDARD full staff_entry
COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)]
kindly submitted
by B.J.Paster, 08-AUG-1990.
Forsyth Dental Center
140 Fenway
Boston, MA 02115
FEATURES Location/Qualifiers
rRNA 1..1444
/product="16S ribosomal RNA"
/gene="16S rRNA"
BASE COUNT 380 a 313 c 419 g 320 t 12 others
ORIGIN
1 ctttatggag agtttgatcc tggctcagag tgaacgctgg cggcgtgcct aatacatgca
61 agtcgaacga tgaagcctag cttgctaggt ggattagtgg cgcacgggtg agtaacgcat
121 agataacatg ccctttagtt tgggatagcc actagaaatg gtgattaata ccaaatactc
181 ctacggggga aagatttatc gctaaaggat tggtctatgt cctatcagct tgttggtgag
241 gtaaaggctc acnnaggcta tgacgggtat ccggcctgag agggtgaacg gacacactgg
301 aactgagaca cggtccagac tcctacggga ggcagcagta gggaatattg ctcaatgggc
361 gcaagcctga agcagcaacg ccgcgtggag gatgaaggtt ttaggattgt aaactccttt
421 tgtcagagaa gataatgacg gtatctgacg aataagcacc ggctaactcc gtgccagcag
481 ccgcggtaat acggagggtg caagcgttac tcggaatcac tgggcgtaaa gagtgcgtag
541 gcggggttgt aagtcagatg tgaaatccta tggcttaacc atagaactgc atttgaaact
601 acaactctgg agtgtgggag aggtaggtgg aattcttggt gtaggggtaa aatccgtaga
661 gatcaagagg aatactcatt gcgaaggcga cctgctggaa caatactgac gctgatgcrc
721 gaaagcgtgg ggagcaaaca ggattagata ccctggtagt ccacgcccta aacgatggat
781 gctmgttgtt ggggggcttg tcctcccagt aatgcagcta acgccttaag catcccgcct
841 ggggagtacg gtcgcaagat taaaactcaa aggaatagac ggggacccgc acaagcggtg
901 gagcangtgg tttaattcga nnnnacacga agaaccttac ctaggcttga cattgaagga
961 atcccctaga aataggggag tgtctagctt gctagaccct gaaaacaggt gctgcacggc
1021 tgtcgtcagc tcgtgtcgtg agatgttggg ttaagtcccg caacgagcgc aaccctcttt
1081 cttagttgct aacaggttnt gctgagctct ctaagaatac tgcctgcgta agcaggagga
1141 aggtgaggac gacgtcaagt catcatggcc cttacgccta gggctacaca cgtgctacaa
1201 tggggtgtac aaagagatgc aatgccgcga ggctgagcca atcttaaaaa catctctcag
1261 ttcggattgc aggctgcaac tcgcctgcat gaagctggaa tcgctagtaa tcgcaaatca
1321 gccatgttgc ggtgaatacg ttcccgggtc ttgtactcac cgnncgtcac accatgggag
1381 ttgtgtttgc cttaagtcag gatgctaaag tagctactgc ccacggcaca cacagcgact
1441 gggg
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