GenBank-Updates@genbank.bio.net (12/01/90)
LOCUS MUSIGHVBI 560 bp ds-DNA ROD 01-DEC-1990
DEFINITION Mouse Ig germline H-chain pseudogene V-region, 5' end.
ACCESSION M34978
KEYWORDS germline; immunoglobulin heavy chain; variable region;
pseudogene.
SOURCE Mouse (strain A/J) liver DNA, clone 1.3.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 560)
AUTHORS Rathbun,G.A., Otani,F., Milner,E.C.B., Capra,J. and
Donald Tucker,P.W.
TITLE Molecular characterization of the A/J J558 family of heavy chain
variable region gene segments
JOURNAL J. Mol. Biol. 202, 383-395 (1988)
STANDARD simple staff_entry
FEATURES from to/span description
pept.ps 119 164 pseudo-Ig H-chain precursor, exon 1
249 > 560 pseudo-Ig H-chain precursor, exon 2
sigp.ps 119 164 pseudo-Ig H-chain signal peptide
249 259 pseudo-Ig H-chain signal peptide
matp.ps 260 > 560 pseudo-Ig H-chain
IVS 165 248 pseudo-Ig H-chain intron
BASE COUNT 155 a 144 c 126 g 135 t
ORIGIN Chromosome 12.
1 tgctcacaaa tatgcaaatc acccaagtgt atggcagtaa atacagggat ctccacaccc
61 taaaaacaac ccatgatcag tgtcctctcc agactccctg aagacactga ctcaaaccac
121 ggaattgatc tgcgtctttc tcttcctcct gtcagtaact gcaggtaagg ggctcaccat
181 ttccaaatct gaagtagaaa aatggactgg gatgtccact cacatccact ctgcctttct
241 cttcacaggt gtccaccctg aggtccagct tcagcagtct ggagctgagc tggtgaggcc
301 tgggtcttca gtgaagctgt cctgcaagac ttctggatat acattcacaa gctacggtat
361 aaactgggtg aagcagaggc ctggacaggg cctggaatgg attggatata tttatattgg
421 aaatggtaat actgagtaca atgagaagtt caagagtaag gccacactga cttcagacac
481 atcctccagc acagcctaca tggagctcag cagcctgacc tctgaggact ctgcgatcta
541 tttctgtgca agacacagtg
//GenBank-Updates@genbank.bio.net (01/31/91)
LOCUS MUSIGHVBI 560 bp ds-DNA ROD 31-JAN-1991
DEFINITION Mouse Ig germline H-chain pseudogene V-region, 5' end.
ACCESSION M34978
KEYWORDS germline; immunoglobulin heavy chain; variable region.
SOURCE Mouse (strain A/J) liver DNA, clone 1.3.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 560)
AUTHORS Rathbun,G.A., Otani,F., Milner,E.C., Capra,J.D. and Tucker,P.W.
TITLE Molecular characterization of the A/J J558 family of heavy chain
variable region gene segments
JOURNAL J. Mol. Biol. 202, 383-395 (1988)
STANDARD simple staff_entry
FEATURES Location/Qualifiers
sig_peptide join(119..164,249..259)
/pseudo
/product="Ig H-chain"
/gene="Ig H-chain J558-1.3"
CDS join(119..164,249..259,260..>560)
/pseudo
/product="Ig H-chain"
/gene="Ig H-chain J558-1.3"
mat_peptide 260..>560
/product="Ig H-chain"
/gene="Ig H-chain J558-1.3"
/codon_start=260
BASE COUNT 155 a 144 c 126 g 135 t
ORIGIN Chromosome 12.
1 tgctcacaaa tatgcaaatc acccaagtgt atggcagtaa atacagggat ctccacaccc
61 taaaaacaac ccatgatcag tgtcctctcc agactccctg aagacactga ctcaaaccac
121 ggaattgatc tgcgtctttc tcttcctcct gtcagtaact gcaggtaagg ggctcaccat
181 ttccaaatct gaagtagaaa aatggactgg gatgtccact cacatccact ctgcctttct
241 cttcacaggt gtccaccctg aggtccagct tcagcagtct ggagctgagc tggtgaggcc
301 tgggtcttca gtgaagctgt cctgcaagac ttctggatat acattcacaa gctacggtat
361 aaactgggtg aagcagaggc ctggacaggg cctggaatgg attggatata tttatattgg
421 aaatggtaat actgagtaca atgagaagtt caagagtaag gccacactga cttcagacac
481 atcctccagc acagcctaca tggagctcag cagcctgacc tctgaggact ctgcgatcta
541 tttctgtgca agacacagtg
//