GenBank-Updates@genbank.bio.net (12/07/90)
LOCUS ROHVP4 2359 bp ds-RNA VRL 07-DEC-1990
DEFINITION Human rotavirus neutralizing protein (VP4) mRNA, complete cds.
ACCESSION M58292 M36397
KEYWORDS neutralization protein.
SOURCE Human rotavirus, cDNA to viral RNA.
ORGANISM Human rotavirus
Viridae; ds-RNA nonenveloped viruses; Reoviridae.
REFERENCE 1 (bases 1 to 2359)
AUTHORS Taniguchi,K., Urasawa,T., Kobayashi,N., Gorziglia,M. and Urasawa,S.
TITLE Nucleotide sequence of VP4 and VP7 genes of human rotaviruses with
subgroup I specificity and long RNA pattern: Implication for new G
serotype specificity
JOURNAL J. Virol. 64, 5640-5644 (1990)
STANDARD simple staff_entry
FEATURES from to/span description
pept 10 2337 neutralizing protein (VP4)
BASE COUNT 878 a 338 c 408 g 735 t
ORIGIN
1 ggctataaaa tggctagcct catttataga caacttctca cgaattcata ttcagtagat
61 ttgcatgatg aaatagaaca gattggatca gagaaaactc aaaatgtaac gataaatcca
121 ggtccatttg cacagactag atatgctcca gttaattgga gacacgggga gattaatgat
181 tcaactacag tggaaccagt tttagatggt ccttatcaac ccactacatt caaaccacct
241 aatgattatt ggctacttat tagctcaaat acagatggag tagtctatga gagtacaaat
301 aatagtgact tttggacagc agttatcgct gttgaaccac gtgttagtca aacaaatagg
361 caatatattt tatttggtga aaataagcag tttaacatag aaaataattc agataaatgg
421 aaatttttcg aaatgtttaa aggtagtagt cagagtaatt tttctaatag acgaactcta
481 acttctaata atagacttgt agggatgcta aaatatggtg gaagagtatg gacatttcat
541 ggtgaaacgc caagagctac tactgacagt tcaaatactg cagatttaaa taatatatca
601 attgtaattc attcagagtt ttatattatt ccaagatctc aagaatctaa atgtaatgag
661 tatatcaata atggtttacc accaattcaa aatactagaa acgtagttcc attatctcta
721 tcatccagat ctattcaata taggagagca caagttaacg aagatattac aatttcaaaa
781 acttcattat ggaaggaaat gcaatataat agagatatta taataagatt taaatttggt
841 aatagtgtta taaaactagg aggattggga tataaatggt ctgaaatatc atacaaagca
901 gcaaattatc agtacagtta ttcgcgtgat ggtgaacagg tcactgcgca taccacttgt
961 tcagtaaatg gagtaaataa ctttagctat aatggaggct cactacctac tgatttcagt
1021 atttcgagat atgaagttat taaagaaaac tcttatgtat atatagacta ttgggacgac
1081 tcaaaagcgt ttagaaatat ggtgtatgtt agatcgttag cagcgaattt gaattcagta
1141 aaatgtgcag gtgggagtta taattttaga ttgcctgttg gtgaatggcc tattatgaat
1201 ggtggtgctg tatcattaca ttttgctgga gttacattat ctacacagtt cactaatttt
1261 gtatcattaa attcactacg atttagattc agtttaacag tagatgaacc atctttctca
1321 ataatacgaa cacgcacagt aaacttgtac ggattaccag cagctaatcc aaacaatgga
1381 aatgaatact atgaaatgtc aggaaggttt tcacttattt ctttagttcc aaccaatgat
1441 gactatcaaa ctccaattat gaattcagta acagtaagac aggatttaga acgtcagctt
1501 agtgatttgc gagaagagtt taattcactg tcgcaagaaa tagctatgtc acaattaatt
1561 gatttagcat tattaccttt agatatgttt tctatgtttt caggaataaa aagcacaatt
1621 gatctaacta aatcaatggc aactagtgta atgaaaaaat ttagaaaatc aaaattagct
1681 acatcaattt cagaaatgac taattcattg tcagatgctg cttcatcagc atcaagaagt
1741 gcttctgtta ggtcgaattt atctgtaatt tcaaattgga ctgatgcttc aaaaagtacg
1801 tccaatataa ctgatttagt gaatgatgtt tcaacacaaa catctacaat tagtaaaaaa
1861 cttagattaa aagagatgat tactcaaact gaaggaatga gttttgatga tatttcagca
1921 gctgtactga aaacaaaaat agatatgtcc acacaaattg gaaaaaatac tttacctgat
1981 atagttactg aagcgtctga aaaatttatt ccaaaacgat catatcgagt attaaaagat
2041 aatgaagtga tggaaataaa cactgaagga aagttttttg cgtataaagt ggatacactt
2101 aatgagatac catttgatat aaataaattc gctgaacttg taacggattc tccagttata
2161 tcagcaataa tagattttaa gacgttaaaa aatttaaatg acaattatgg aattacccgg
2221 atggaagcgc ttaatttaat taaatcgaat ccaaatgtac tacgtaattt tattaatcaa
2281 aataatccaa ttataagaaa tagaattgag cagttaattc tacaatgtaa attgtgagaa
2341 tgtcatcgag gatgtgacc
//GenBank-Updates@genbank.bio.net (12/07/90)
LOCUS ROHVP7 1062 bp ds-RNA VRL 07-DEC-1990
DEFINITION Human rotavirus neutralizing protein (VP7) mRNA, complete cds.
ACCESSION M58290 M36396
KEYWORDS neutralization protein.
SOURCE Human rotavirus, cDNA to viral RNA.
ORGANISM Human rotavirus
Viridae; ds-RNA nonenveloped viruses; Reoviridae.
REFERENCE 1 (bases 1 to 1062)
AUTHORS Taniguchi,K., Urasawa,T., Kobayashi,N., Gorziglia,M. and Urasawa,S.
TITLE Nucleotide sequence of VP4 and VP7 genes of human rotaviruses with
subgroup I specificity and long RNA pattern: Implication for new G
serotype specificity
JOURNAL J. Virol. 64, 5640-5644 (1990)
STANDARD simple staff_entry
FEATURES from to/span description
pept 49 1029 neutralizing protein (VP7)
BASE COUNT 374 a 170 c 183 g 335 t
ORIGIN
1 ggctttaaaa gagagaattt ccgtttggct agcggttagc tccttttaat gtatggtatt
61 gaatatacca caattctaac cattttgata tcaatcgttc tactaaatta tatattaaaa
121 tcgataacta gtatgatgga ctttattata tatagattct tactagtttt tgttatcgta
181 ctgccattta ttaaagctca aaactatgga ataaatcttc caatcacagg ttctatggat
241 actgcatatg taaactctac gcaacaagaa agttttatga cttccacttt atgcttgtat
301 tatccgaatt cagttacgac tgaaataact gaccccgatt ggacgcatac actatcacaa
361 ctatttctga ctaaaggatg gccaacaaat tctgtttact tcaagagtta tgctgacata
421 gcgtccttct ctgtaaatcc acagttatac tgtgattaca atatcgtgtt agtacaatat
481 caaaattcat tagcgttaga tgtttcggaa ctcgctgatt taattttaaa tgaatggtta
541 tgtaatccga tggacgtaac gttatattat tatcaacaga ctgacgaagc caataaatgg
601 atatcaatgg gagattcatg tacagttaaa gtatgtcctt taaatatgca aacgttagga
661 attggatgta caacaaccga cgtcgcaaca tttgaagaag tagcaaacgc ggaaaagtta
721 gtaattactg atgttgtaga cggagtcaat cataagatca atattacatt gaatacatgc
781 actatacaaa attgtaaaaa attgggacct agagaaaacg tagcaattat acaagtaggt
841 ggttctgaca tcatagatat aacagcagat ccaacaacaa ttccacaaac tgaaagaata
901 atgcgaataa attggaaaaa atggtggcaa gtgttttata ccgtagtaga ttacataaat
961 caaatagttc aggtaatgtc taaacgatct agatcactaa attcagctgc attttattac
1021 agaatttaga tatagcttag gttagagttg gtcgatgtga cc
//GenBank-Updates@genbank.bio.net (01/31/91)
LOCUS ROHVP4 2359 bp ds-RNA VRL 31-JAN-1991
DEFINITION Human rotavirus neutralizing protein (VP4) mRNA, complete cds.
ACCESSION M58292 M36397
KEYWORDS neutralization protein.
SOURCE Human rotavirus, cDNA to viral RNA.
ORGANISM Human rotavirus
Viridae; ds-RNA nonenveloped viruses; Reoviridae.
REFERENCE 1 (bases 1 to 2359)
AUTHORS Taniguchi,K., Urasawa,T., Kobayashi,N., Gorziglia,M. and Urasawa,S.
TITLE Nucleotide sequence of VP4 and VP7 genes of human rotaviruses with
subgroup I specificity and long RNA pattern: Implication for new G
serotype specificity
JOURNAL J. Virol. 64, 5640-5644 (1990)
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS 10..2337
/product="neutralizing protein VP4"
/gene="VP4"
/codon_start=10
BASE COUNT 878 a 338 c 408 g 735 t
ORIGIN
1 ggctataaaa tggctagcct catttataga caacttctca cgaattcata ttcagtagat
61 ttgcatgatg aaatagaaca gattggatca gagaaaactc aaaatgtaac gataaatcca
121 ggtccatttg cacagactag atatgctcca gttaattgga gacacgggga gattaatgat
181 tcaactacag tggaaccagt tttagatggt ccttatcaac ccactacatt caaaccacct
241 aatgattatt ggctacttat tagctcaaat acagatggag tagtctatga gagtacaaat
301 aatagtgact tttggacagc agttatcgct gttgaaccac gtgttagtca aacaaatagg
361 caatatattt tatttggtga aaataagcag tttaacatag aaaataattc agataaatgg
421 aaatttttcg aaatgtttaa aggtagtagt cagagtaatt tttctaatag acgaactcta
481 acttctaata atagacttgt agggatgcta aaatatggtg gaagagtatg gacatttcat
541 ggtgaaacgc caagagctac tactgacagt tcaaatactg cagatttaaa taatatatca
601 attgtaattc attcagagtt ttatattatt ccaagatctc aagaatctaa atgtaatgag
661 tatatcaata atggtttacc accaattcaa aatactagaa acgtagttcc attatctcta
721 tcatccagat ctattcaata taggagagca caagttaacg aagatattac aatttcaaaa
781 acttcattat ggaaggaaat gcaatataat agagatatta taataagatt taaatttggt
841 aatagtgtta taaaactagg aggattggga tataaatggt ctgaaatatc atacaaagca
901 gcaaattatc agtacagtta ttcgcgtgat ggtgaacagg tcactgcgca taccacttgt
961 tcagtaaatg gagtaaataa ctttagctat aatggaggct cactacctac tgatttcagt
1021 atttcgagat atgaagttat taaagaaaac tcttatgtat atatagacta ttgggacgac
1081 tcaaaagcgt ttagaaatat ggtgtatgtt agatcgttag cagcgaattt gaattcagta
1141 aaatgtgcag gtgggagtta taattttaga ttgcctgttg gtgaatggcc tattatgaat
1201 ggtggtgctg tatcattaca ttttgctgga gttacattat ctacacagtt cactaatttt
1261 gtatcattaa attcactacg atttagattc agtttaacag tagatgaacc atctttctca
1321 ataatacgaa cacgcacagt aaacttgtac ggattaccag cagctaatcc aaacaatgga
1381 aatgaatact atgaaatgtc aggaaggttt tcacttattt ctttagttcc aaccaatgat
1441 gactatcaaa ctccaattat gaattcagta acagtaagac aggatttaga acgtcagctt
1501 agtgatttgc gagaagagtt taattcactg tcgcaagaaa tagctatgtc acaattaatt
1561 gatttagcat tattaccttt agatatgttt tctatgtttt caggaataaa aagcacaatt
1621 gatctaacta aatcaatggc aactagtgta atgaaaaaat ttagaaaatc aaaattagct
1681 acatcaattt cagaaatgac taattcattg tcagatgctg cttcatcagc atcaagaagt
1741 gcttctgtta ggtcgaattt atctgtaatt tcaaattgga ctgatgcttc aaaaagtacg
1801 tccaatataa ctgatttagt gaatgatgtt tcaacacaaa catctacaat tagtaaaaaa
1861 cttagattaa aagagatgat tactcaaact gaaggaatga gttttgatga tatttcagca
1921 gctgtactga aaacaaaaat agatatgtcc acacaaattg gaaaaaatac tttacctgat
1981 atagttactg aagcgtctga aaaatttatt ccaaaacgat catatcgagt attaaaagat
2041 aatgaagtga tggaaataaa cactgaagga aagttttttg cgtataaagt ggatacactt
2101 aatgagatac catttgatat aaataaattc gctgaacttg taacggattc tccagttata
2161 tcagcaataa tagattttaa gacgttaaaa aatttaaatg acaattatgg aattacccgg
2221 atggaagcgc ttaatttaat taaatcgaat ccaaatgtac tacgtaattt tattaatcaa
2281 aataatccaa ttataagaaa tagaattgag cagttaattc tacaatgtaa attgtgagaa
2341 tgtcatcgag gatgtgacc
//GenBank-Updates@genbank.bio.net (01/31/91)
LOCUS ROHVP7 1062 bp ds-RNA VRL 31-JAN-1991
DEFINITION Human rotavirus neutralizing protein (VP7) mRNA, complete cds.
ACCESSION M58290 M36396
KEYWORDS neutralization protein.
SOURCE Human rotavirus, cDNA to viral RNA.
ORGANISM Human rotavirus
Viridae; ds-RNA nonenveloped viruses; Reoviridae.
REFERENCE 1 (bases 1 to 1062)
AUTHORS Taniguchi,K., Urasawa,T., Kobayashi,N., Gorziglia,M. and Urasawa,S.
TITLE Nucleotide sequence of VP4 and VP7 genes of human rotaviruses with
subgroup I specificity and long RNA pattern: Implication for new G
serotype specificity
JOURNAL J. Virol. 64, 5640-5644 (1990)
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS 49..1029
/product="neutralizing protein VP7"
/gene="VP7"
/codon_start=49
BASE COUNT 374 a 170 c 183 g 335 t
ORIGIN
1 ggctttaaaa gagagaattt ccgtttggct agcggttagc tccttttaat gtatggtatt
61 gaatatacca caattctaac cattttgata tcaatcgttc tactaaatta tatattaaaa
121 tcgataacta gtatgatgga ctttattata tatagattct tactagtttt tgttatcgta
181 ctgccattta ttaaagctca aaactatgga ataaatcttc caatcacagg ttctatggat
241 actgcatatg taaactctac gcaacaagaa agttttatga cttccacttt atgcttgtat
301 tatccgaatt cagttacgac tgaaataact gaccccgatt ggacgcatac actatcacaa
361 ctatttctga ctaaaggatg gccaacaaat tctgtttact tcaagagtta tgctgacata
421 gcgtccttct ctgtaaatcc acagttatac tgtgattaca atatcgtgtt agtacaatat
481 caaaattcat tagcgttaga tgtttcggaa ctcgctgatt taattttaaa tgaatggtta
541 tgtaatccga tggacgtaac gttatattat tatcaacaga ctgacgaagc caataaatgg
601 atatcaatgg gagattcatg tacagttaaa gtatgtcctt taaatatgca aacgttagga
661 attggatgta caacaaccga cgtcgcaaca tttgaagaag tagcaaacgc ggaaaagtta
721 gtaattactg atgttgtaga cggagtcaat cataagatca atattacatt gaatacatgc
781 actatacaaa attgtaaaaa attgggacct agagaaaacg tagcaattat acaagtaggt
841 ggttctgaca tcatagatat aacagcagat ccaacaacaa ttccacaaac tgaaagaata
901 atgcgaataa attggaaaaa atggtggcaa gtgttttata ccgtagtaga ttacataaat
961 caaatagttc aggtaatgtc taaacgatct agatcactaa attcagctgc attttattac
1021 agaatttaga tatagcttag gttagagttg gtcgatgtga cc
//