GenBank-Updates@genbank.bio.net (01/31/91)
LOCUS AFAHOXS 5541 bp ds-DNA BCT 31-JAN-1991
DEFINITION A.eutrophus hoxS locus encoding NAD-reducing hydrogenase subunit
genes (hoxF, hoxU, hoxY and hoxH) complete cds.
ACCESSION M55230 M37904
KEYWORDS NAD-reducing hydrogenase.
SOURCE A.eutrophus (strain H16) DNA.
ORGANISM Alcaligenes eutrophus
Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Aerobic rods and
cocci; Alcaligenaceae.
REFERENCE 1 (bases 1 to 5541)
AUTHORS Tran-Betcke,A., Warnecke,U., Boecker,C., Zaborosch,C. and
Friedrich,B.
TITLE Cloning and nucleotide sequences of the genes for the subunits of
NAD-reducing hydrogenase of Alcaligenes eutropus H16
JOURNAL J. Bacteriol. 172, 2920-2929 (1990)
STANDARD full staff_entry
FEATURES Location/Qualifiers
mRNA 654..5335
/gene="hoxS locus"
RBS 691..697
/gene="hoxS locus"
CDS 705..2513
/gene="hoxF"
/codon_start=705
/product="NAD-reducing hydrogenase"
CDS 2510..3214
/gene="hoxU"
/codon_start=2510
/product="NAD-reducing hydrogenase"
CDS 3211..3840
/gene="hoxY"
/codon_start=3211
/product="NAD-reducing hydrogenase"
RBS 3846..3850
/gene="hoxH"
CDS 3858..5324
/gene="hoxH"
/codon_start=3858
/product="NAD-reducing hydrogenase"
terminator 5336..5396
/gene="hoxS locus"
BASE COUNT 1127 a 1593 c 1759 g 1062 t
ORIGIN
1 acccattacc tgccggcatc gcgcctgccc gaagtgccag tcgctcgccc gcgcgcaatg
61 gctcgaacac cggcaggctg agctgctgcc cgaggtcgag tatttccatg tggtcttcac
121 ggtgcccgac cccatcgcgg cgctcgccta tcaaaacaag aatctctatg acatcctgtt
181 ccgcaccagc gccgaaaccc tgcgcacgat cgccgccgat ccgaaacacc tgggcgccga
241 gatcggcgcc agacctcatc gggtcctgct cataggttcg tagccgcgat cgccaaccaa
301 aaaaaccctc tcctgcggga aatccgcacg ctacgttctg tgggaaccgg agcgggtgac
361 tgcctccgtc acccggtgct cggggtgcga ttccccgggt ctacttacca aatcggccgc
421 gcacccaatg agaggcgctg gcacaagctt gcacagactt gcccgccaag cgaagcagcc
481 ttgccacatc ggccgaccca atggcaatgc cgctgccacc cgccggatgg ccgttctgga
541 aacggcttga gcgacgtcaa gaatttcctt tctcgacaag cacttagccg ggcctcctgg
601 tggtttccct taggccctgc gaaattggcg cacatcctgc gttccacctg cgcatcgaag
661 tgacgcacca agcaaggggc gaacattagt aaggaggaga caacatggat agtcgtatca
721 cgacaatact cgagcgctac cgctcagacc gtacacggct gatcgacata ctttgggatg
781 ttcagcatga gtatgggcac attcccgatg cggtactgcc gcaactgggg gctgggttga
841 agctgtcccc gctggacatt cgcgaaacgg cgtcgttcta ccactttttc cttgacaagc
901 cgtcgggcaa gtatcggatt tacttgtgca attccgtgat tgccaagatc aacggctatc
961 aggcggtgcg tgaggcgctc gaacgcgaga ctgggattcg cttcggcgaa accgacccga
1021 atgggatgtt tggcctgttc gacaccccct gtatcggact cagcgatcag gaaccggcga
1081 tgctgatcga taaggtggta ttcacccgcc tgcgacccgg aaagatcacg gacatcatcg
1141 cgcagttgaa acaaggacga tcgccggccg agatcgcgaa cccggccggt ttgcccagtc
1201 aggacatcgc ctatgtcgat gccatggtcg agtccaatgt ccgcaccaag gggccggtgt
1261 tcttccgtgg ccggacggat ttgagatctt tgctcgacca atgcctgctg ctcaagcccg
1321 aacaagtgat tgagaccatc gtcgactcca ggctgcgcgg acgtggcggc gcagggttct
1381 cgaccgggct gaagtggcgg ctgtgtcggg atgccgaaag cgagcagaag tatgtaatct
1441 gcaacgccga cgaaggtgag cccggcacgt tcaaggatag ggtcctcctg acacgcgctc
1501 ccaagaaggt tttcgtcgga atggttatcg ccgcgtatgc gatcggctgc cgcaagggta
1561 tcgtctatct gcggggggaa tacttctacc tcaaggatta tctggagcga cagcttcagg
1621 aacttcggga ggacgggttg ctggggcgcg ctatcggtgg ccgggcgggc tttgatttcg
1681 atatccgtat tcagatgggg gccggcgctt atatctgcgg cgacgaatcg gcgctcatcg
1741 agtcctgcga ggggaaacgg ggcacgccac gggtgaaacc tccgttcccg gtgcagcaag
1801 ggtatctggg caagcccacc agcgtcaaca acgttgagac ctttgccgcc gtgtcgcgga
1861 tcatggagga aggcgcggac tggttccggg cgatgggaac gccagactcg gccggcaccc
1921 ggctgctgag cgtggctggc gattgcagca agcctggcat ctacgaggtg gaatgggggg
1981 tcaccctcaa cgaagtgctg gcgatggtcg gagcgcggga cgcgcgggcc gtccagatca
2041 gcggtccttc cggtgaatgc gtgtcggtgg caaaggacgg tgagcgcaag ctcgcgtacg
2101 aagatctttc gtgcaatggc gccttcacca ttttcaactg caagcgcgac ctgctggaaa
2161 tcgtgcgtga ccacatgcag ttcttcgtcg aagagtcctg cggcatttgt gtgccatgtc
2221 gcgccggcaa cgttgatctg caccggaagg tcgaatgggt catcgcgggc aaggcctgcc
2281 agaaggatct ggacgatatg gtcagttggg gagcgctggt gcggaggacc agtcgatgtg
2341 gccttggggc cacatcgccc aagcccatcc tgacgacgct ggagaaattc cccgagatct
2401 atcagaacaa gctggtgagg cacgagggcc cgctgctgcc atcgttcgat ctcgataccg
2461 ccttgggcgg gtatgagaag gcgctgaagg atctggaaga ggtgacaaga tgagcattca
2521 aattacgatc gacggcaaga cgctcacgac cgaggaagga cgaacgctgg tggatgttgc
2581 cgcagagaac ggcgtttaca tcccgacgct gtgctacctc aaggacaagc cctgcctcgg
2641 cacctgccgg gtgtgttcgg tcaaggtgaa tggcaatgtc gccgcggcat gtacggtgcg
2701 ggtctcgaag ggcctgaatg tcgaggtcaa cgaccccgaa ttggtcgaca tgcgcaaggc
2761 gctggtcgaa ttcctgttcg cggaaggcaa ccacaactgc ccgagttgcg agaagagcgg
2821 ccgttgccag ttgcaggcgg tcggctacga ggtggacatg atggtctcgc gctttccgta
2881 ccggttcccg gtccgcgtgg tggaccacgc gtccgaaaag atctggctcg agcgggatcg
2941 gtgcatcttc tgtcagcgct gtgtcgagtt catccgcgac aaggcaagcg gccggaagat
3001 cttcagcatc agccatcggg gtcccgagtc gcgcatcgag atcgatgccg aactggcgaa
3061 cgccatgccg ccggagcaag tcaaagaggc ggttgcgatc tgcccggtgg gcaccattct
3121 cgagaaacgg gtcggttatg acgatcccat cggacgacgc aagtacgaaa tccagtcggt
3181 gcgcgcacgc gcgctggaag gagaagacaa atgagagccc cccacaaaga cgagattgcg
3241 tcgcacgaat tgcctgcgac gccgatggat ccggcgctgg ccgcgaaccg tgaaggcaag
3301 atcaaggtgg ccacgatcgg tctgtgcggc tgctgggggt gtaccttgtc ctttctcgac
3361 atggacgagc ggctcctgcc gctgttggag aaagtcaccc tcctccgctc gtcgctgacc
3421 gatatcaaac gaattccgga gcgctgtgcg atcggcttcg tggaaggtgg cgtctcgagc
3481 gaggagaaca tcgaaacgct ggagcacttt cgcgagaact gcgacatcct gatttcggtc
3541 ggggcgtgcg cggtgtgggg cggtgtgccg gcgatgcgca acgtcttcga gctgaaagat
3601 tgtctggcag aggcttatgt caactcggcg actgccgtcc cgggcgccaa ggccgtcgtt
3661 ccattccatc ccgatatccc gaggatcacc accaaggtct acccttgtca tgaggtggtc
3721 aagatggatt atttcattcc gggttgtccc ccggatggag atgccatctt caaggtgctg
3781 gacgatctgg tgaatggacg gccattcgat ttgccgagct cgatcaatcg ctacgattga
3841 ttaacggagg gtttgttatg agcagaaaac tggttatcga cccggtgacc cgcatcgagg
3901 gtcacggcaa ggtggtggtg cacctggatg acgacaacaa ggtcgtcgac gcaaagctgc
3961 acgtcgtgga gttccggggc tttgaaaagt tcgttcaggg ccatcccttc tgggaggcgc
4021 cgatgttcct gcagcgcatc tgcggcatct gtttcgtcag tcaccatctg tgcggggcca
4081 aggcgctgga tgacatggtc ggcgtcggct tgaagtccgg catccatgtc accccgacgg
4141 cggagaaaat gcgccggctc ggccactacg cgcagatgct ccagtcccat acgaccgcct
4201 atttctacct gatcgtgccg gagatgctgt ttggcatgga cgcgccgccc gcacagcgca
4261 acgtgctcgg cctgatcgag gccaatcccg acttggtgaa gcgcgtcgtg atgttgcgca
4321 aatggggaca ggaagtcatc aaggcggtgt tcggcaagaa gatgcacggc atcaattcgg
4381 tgccgggagg cgtcaacaac aacctgagca tcgccgagcg cgaccgtttc ctgaacgggg
4441 aggagggcct tctgtcggtg gatcaggtca tcgattacgc gcaggatggc ctgcgcctgt
4501 tctacgactt ccatcagaaa caccgggcgc aggtcgatag tttcgcggac gtgcccgcgc
4561 tcagcatgtg cctggtcggc gacgacgaca acgtggacta ctaccacggc aggctgagga
4621 tcatcgacga cgacaagcac atcgtccgtg aattcgacta tcacgactat ctggatcatt
4681 tctccgaagc ggtggaggaa tggagctaca tgaagttccc ctacctcaag gagcttggga
4741 gagagcaggg atcggtgcgc gtggggccgc ttggccgcat gaacgtgacg aagtcgctcc
4801 cgacaccgct cgcgcaggag gcgctggaac ggttccacgc ctacacgaag gggcggacga
4861 acaacatgac gctgcatact aactgggcac gggccatcga gatcctccac gccgcggagg
4921 tggtcaaaga actgctgcat gacccggacc tgcagaagga tcagctggtg ttgacaccgc
4981 cccccaatgc gtggacaggt gaaggcgtcg gcgtggtcga agcgccacgc ggtaccttgc
5041 ttcaccatta tcgtgccgat gagcgcggca atatcacgtt cgccaacctg gtcgtcgcca
5101 ccacccagaa ccaccaggtc atgaatcgca cggtgcgcag cgtcgccgag gactacctgg
5161 gcggacatgg cgaaatcacc gagggcatga tgaatgccat cgaggtgggt attcgcgcct
5221 acgatccatg cctgagctgc gcgacacacg ccctggggca gatgccgctg gtggtctcgg
5281 tctttgacgc ggcggggcgc ctgatcgatg aacgcgcccg ctgagtttcc ctatgtgacc
5341 cttgccgatt tcgatgatcc gtcgacgctg atctacggaa tcggcaacgt gggtcggcag
5401 gacgacggat tggggtgggc tttcatcgac cgactggaag cggagtccct ctgctccggg
5461 gcggaggttc agcggcatta tcagcttcac ctcgaggatg ccgacctgat cagccgcaag
5521 agaaaggtgt tgttcatcga t
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