GenBank-Updates@genbank.bio.net (01/31/91)
LOCUS AFAHOXS 5541 bp ds-DNA BCT 31-JAN-1991 DEFINITION A.eutrophus hoxS locus encoding NAD-reducing hydrogenase subunit genes (hoxF, hoxU, hoxY and hoxH) complete cds. ACCESSION M55230 M37904 KEYWORDS NAD-reducing hydrogenase. SOURCE A.eutrophus (strain H16) DNA. ORGANISM Alcaligenes eutrophus Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Aerobic rods and cocci; Alcaligenaceae. REFERENCE 1 (bases 1 to 5541) AUTHORS Tran-Betcke,A., Warnecke,U., Boecker,C., Zaborosch,C. and Friedrich,B. TITLE Cloning and nucleotide sequences of the genes for the subunits of NAD-reducing hydrogenase of Alcaligenes eutropus H16 JOURNAL J. Bacteriol. 172, 2920-2929 (1990) STANDARD full staff_entry FEATURES Location/Qualifiers mRNA 654..5335 /gene="hoxS locus" RBS 691..697 /gene="hoxS locus" CDS 705..2513 /gene="hoxF" /codon_start=705 /product="NAD-reducing hydrogenase" CDS 2510..3214 /gene="hoxU" /codon_start=2510 /product="NAD-reducing hydrogenase" CDS 3211..3840 /gene="hoxY" /codon_start=3211 /product="NAD-reducing hydrogenase" RBS 3846..3850 /gene="hoxH" CDS 3858..5324 /gene="hoxH" /codon_start=3858 /product="NAD-reducing hydrogenase" terminator 5336..5396 /gene="hoxS locus" BASE COUNT 1127 a 1593 c 1759 g 1062 t ORIGIN 1 acccattacc tgccggcatc gcgcctgccc gaagtgccag tcgctcgccc gcgcgcaatg 61 gctcgaacac cggcaggctg agctgctgcc cgaggtcgag tatttccatg tggtcttcac 121 ggtgcccgac cccatcgcgg cgctcgccta tcaaaacaag aatctctatg acatcctgtt 181 ccgcaccagc gccgaaaccc tgcgcacgat cgccgccgat ccgaaacacc tgggcgccga 241 gatcggcgcc agacctcatc gggtcctgct cataggttcg tagccgcgat cgccaaccaa 301 aaaaaccctc tcctgcggga aatccgcacg ctacgttctg tgggaaccgg agcgggtgac 361 tgcctccgtc acccggtgct cggggtgcga ttccccgggt ctacttacca aatcggccgc 421 gcacccaatg agaggcgctg gcacaagctt gcacagactt gcccgccaag cgaagcagcc 481 ttgccacatc ggccgaccca atggcaatgc cgctgccacc cgccggatgg ccgttctgga 541 aacggcttga gcgacgtcaa gaatttcctt tctcgacaag cacttagccg ggcctcctgg 601 tggtttccct taggccctgc gaaattggcg cacatcctgc gttccacctg cgcatcgaag 661 tgacgcacca agcaaggggc gaacattagt aaggaggaga caacatggat agtcgtatca 721 cgacaatact cgagcgctac cgctcagacc gtacacggct gatcgacata ctttgggatg 781 ttcagcatga gtatgggcac attcccgatg cggtactgcc gcaactgggg gctgggttga 841 agctgtcccc gctggacatt cgcgaaacgg cgtcgttcta ccactttttc cttgacaagc 901 cgtcgggcaa gtatcggatt tacttgtgca attccgtgat tgccaagatc aacggctatc 961 aggcggtgcg tgaggcgctc gaacgcgaga ctgggattcg cttcggcgaa accgacccga 1021 atgggatgtt tggcctgttc gacaccccct gtatcggact cagcgatcag gaaccggcga 1081 tgctgatcga taaggtggta ttcacccgcc tgcgacccgg aaagatcacg gacatcatcg 1141 cgcagttgaa acaaggacga tcgccggccg agatcgcgaa cccggccggt ttgcccagtc 1201 aggacatcgc ctatgtcgat gccatggtcg agtccaatgt ccgcaccaag gggccggtgt 1261 tcttccgtgg ccggacggat ttgagatctt tgctcgacca atgcctgctg ctcaagcccg 1321 aacaagtgat tgagaccatc gtcgactcca ggctgcgcgg acgtggcggc gcagggttct 1381 cgaccgggct gaagtggcgg ctgtgtcggg atgccgaaag cgagcagaag tatgtaatct 1441 gcaacgccga cgaaggtgag cccggcacgt tcaaggatag ggtcctcctg acacgcgctc 1501 ccaagaaggt tttcgtcgga atggttatcg ccgcgtatgc gatcggctgc cgcaagggta 1561 tcgtctatct gcggggggaa tacttctacc tcaaggatta tctggagcga cagcttcagg 1621 aacttcggga ggacgggttg ctggggcgcg ctatcggtgg ccgggcgggc tttgatttcg 1681 atatccgtat tcagatgggg gccggcgctt atatctgcgg cgacgaatcg gcgctcatcg 1741 agtcctgcga ggggaaacgg ggcacgccac gggtgaaacc tccgttcccg gtgcagcaag 1801 ggtatctggg caagcccacc agcgtcaaca acgttgagac ctttgccgcc gtgtcgcgga 1861 tcatggagga aggcgcggac tggttccggg cgatgggaac gccagactcg gccggcaccc 1921 ggctgctgag cgtggctggc gattgcagca agcctggcat ctacgaggtg gaatgggggg 1981 tcaccctcaa cgaagtgctg gcgatggtcg gagcgcggga cgcgcgggcc gtccagatca 2041 gcggtccttc cggtgaatgc gtgtcggtgg caaaggacgg tgagcgcaag ctcgcgtacg 2101 aagatctttc gtgcaatggc gccttcacca ttttcaactg caagcgcgac ctgctggaaa 2161 tcgtgcgtga ccacatgcag ttcttcgtcg aagagtcctg cggcatttgt gtgccatgtc 2221 gcgccggcaa cgttgatctg caccggaagg tcgaatgggt catcgcgggc aaggcctgcc 2281 agaaggatct ggacgatatg gtcagttggg gagcgctggt gcggaggacc agtcgatgtg 2341 gccttggggc cacatcgccc aagcccatcc tgacgacgct ggagaaattc cccgagatct 2401 atcagaacaa gctggtgagg cacgagggcc cgctgctgcc atcgttcgat ctcgataccg 2461 ccttgggcgg gtatgagaag gcgctgaagg atctggaaga ggtgacaaga tgagcattca 2521 aattacgatc gacggcaaga cgctcacgac cgaggaagga cgaacgctgg tggatgttgc 2581 cgcagagaac ggcgtttaca tcccgacgct gtgctacctc aaggacaagc cctgcctcgg 2641 cacctgccgg gtgtgttcgg tcaaggtgaa tggcaatgtc gccgcggcat gtacggtgcg 2701 ggtctcgaag ggcctgaatg tcgaggtcaa cgaccccgaa ttggtcgaca tgcgcaaggc 2761 gctggtcgaa ttcctgttcg cggaaggcaa ccacaactgc ccgagttgcg agaagagcgg 2821 ccgttgccag ttgcaggcgg tcggctacga ggtggacatg atggtctcgc gctttccgta 2881 ccggttcccg gtccgcgtgg tggaccacgc gtccgaaaag atctggctcg agcgggatcg 2941 gtgcatcttc tgtcagcgct gtgtcgagtt catccgcgac aaggcaagcg gccggaagat 3001 cttcagcatc agccatcggg gtcccgagtc gcgcatcgag atcgatgccg aactggcgaa 3061 cgccatgccg ccggagcaag tcaaagaggc ggttgcgatc tgcccggtgg gcaccattct 3121 cgagaaacgg gtcggttatg acgatcccat cggacgacgc aagtacgaaa tccagtcggt 3181 gcgcgcacgc gcgctggaag gagaagacaa atgagagccc cccacaaaga cgagattgcg 3241 tcgcacgaat tgcctgcgac gccgatggat ccggcgctgg ccgcgaaccg tgaaggcaag 3301 atcaaggtgg ccacgatcgg tctgtgcggc tgctgggggt gtaccttgtc ctttctcgac 3361 atggacgagc ggctcctgcc gctgttggag aaagtcaccc tcctccgctc gtcgctgacc 3421 gatatcaaac gaattccgga gcgctgtgcg atcggcttcg tggaaggtgg cgtctcgagc 3481 gaggagaaca tcgaaacgct ggagcacttt cgcgagaact gcgacatcct gatttcggtc 3541 ggggcgtgcg cggtgtgggg cggtgtgccg gcgatgcgca acgtcttcga gctgaaagat 3601 tgtctggcag aggcttatgt caactcggcg actgccgtcc cgggcgccaa ggccgtcgtt 3661 ccattccatc ccgatatccc gaggatcacc accaaggtct acccttgtca tgaggtggtc 3721 aagatggatt atttcattcc gggttgtccc ccggatggag atgccatctt caaggtgctg 3781 gacgatctgg tgaatggacg gccattcgat ttgccgagct cgatcaatcg ctacgattga 3841 ttaacggagg gtttgttatg agcagaaaac tggttatcga cccggtgacc cgcatcgagg 3901 gtcacggcaa ggtggtggtg cacctggatg acgacaacaa ggtcgtcgac gcaaagctgc 3961 acgtcgtgga gttccggggc tttgaaaagt tcgttcaggg ccatcccttc tgggaggcgc 4021 cgatgttcct gcagcgcatc tgcggcatct gtttcgtcag tcaccatctg tgcggggcca 4081 aggcgctgga tgacatggtc ggcgtcggct tgaagtccgg catccatgtc accccgacgg 4141 cggagaaaat gcgccggctc ggccactacg cgcagatgct ccagtcccat acgaccgcct 4201 atttctacct gatcgtgccg gagatgctgt ttggcatgga cgcgccgccc gcacagcgca 4261 acgtgctcgg cctgatcgag gccaatcccg acttggtgaa gcgcgtcgtg atgttgcgca 4321 aatggggaca ggaagtcatc aaggcggtgt tcggcaagaa gatgcacggc atcaattcgg 4381 tgccgggagg cgtcaacaac aacctgagca tcgccgagcg cgaccgtttc ctgaacgggg 4441 aggagggcct tctgtcggtg gatcaggtca tcgattacgc gcaggatggc ctgcgcctgt 4501 tctacgactt ccatcagaaa caccgggcgc aggtcgatag tttcgcggac gtgcccgcgc 4561 tcagcatgtg cctggtcggc gacgacgaca acgtggacta ctaccacggc aggctgagga 4621 tcatcgacga cgacaagcac atcgtccgtg aattcgacta tcacgactat ctggatcatt 4681 tctccgaagc ggtggaggaa tggagctaca tgaagttccc ctacctcaag gagcttggga 4741 gagagcaggg atcggtgcgc gtggggccgc ttggccgcat gaacgtgacg aagtcgctcc 4801 cgacaccgct cgcgcaggag gcgctggaac ggttccacgc ctacacgaag gggcggacga 4861 acaacatgac gctgcatact aactgggcac gggccatcga gatcctccac gccgcggagg 4921 tggtcaaaga actgctgcat gacccggacc tgcagaagga tcagctggtg ttgacaccgc 4981 cccccaatgc gtggacaggt gaaggcgtcg gcgtggtcga agcgccacgc ggtaccttgc 5041 ttcaccatta tcgtgccgat gagcgcggca atatcacgtt cgccaacctg gtcgtcgcca 5101 ccacccagaa ccaccaggtc atgaatcgca cggtgcgcag cgtcgccgag gactacctgg 5161 gcggacatgg cgaaatcacc gagggcatga tgaatgccat cgaggtgggt attcgcgcct 5221 acgatccatg cctgagctgc gcgacacacg ccctggggca gatgccgctg gtggtctcgg 5281 tctttgacgc ggcggggcgc ctgatcgatg aacgcgcccg ctgagtttcc ctatgtgacc 5341 cttgccgatt tcgatgatcc gtcgacgctg atctacggaa tcggcaacgt gggtcggcag 5401 gacgacggat tggggtgggc tttcatcgac cgactggaag cggagtccct ctgctccggg 5461 gcggaggttc agcggcatta tcagcttcac ctcgaggatg ccgacctgat cagccgcaag 5521 agaaaggtgt tgttcatcga t //