GenBank-Updates@genbank.bio.net (02/05/91)
LOCUS APCCG 7555 bp ss-RNA VRL 05-FEB-1991
DEFINITION Apple chlorotic leaf spot virus, complete genome.
ACCESSION M58152 M31714
KEYWORDS coat protein.
SOURCE Apple chlorotic leaf spot virus (strain P863), cDNA to genomic RNA.
ORGANISM Apple chlorotic leaf spot virus
Viridae; ss-RNA nonenveloped viruses; Closterovirus.
REFERENCE 1 (bases 1 to 7555)
AUTHORS German,S., Candresse,T., Lanneau,M., Huet,J.C., Pernollet,J.C. and
Dunez,J.
TITLE Nucleotide sequence and genomic organization of Apple chlorotic
leaf spot closterovirus
JOURNAL Virology 179, 104-112 (1990)
STANDARD full staff_review
FEATURES Location/Qualifiers
CDS 152..5806
/label=ORF 1
/codon_start=152
CDS 5718..7100
/label=ORF 2
/codon_start=5718
CDS 6784..7365
/evidence=EXPERIMENTAL
/label=ORF 3
/codon_start=6784
/product="coat protein"
BASE COUNT 2384 a 1334 c 1802 g 2035 t
ORIGIN
1 tgatactgat acagtgtaca ctcacgacgt gagtaaacag attgacgtaa cgcctcaatc
61 gtggtcaagg accagcattt caatgctatc acattaaata caatcacgtt gtattacaaa
121 actttccgtt taattacgtg aaaggttaca aatggccttc tcttacagaa cgccacagga
181 ggaacttctg agcagactac cacagtccca acaggaggtg atcagcggat ttcagtacga
241 acgcattcaa aaggaggaag agaagaaggt ggaaaacttc tctttttacc taccagagaa
301 aaccagggag tggtttacta agtcaggtgt ctatctttcg cctttcgctt atgttaatca
361 ttctcaccct ggttgtaaaa ctctggagaa ccacctttta tttaatgttg tagctagtta
421 tattagtaag tactcctatg tagcttgtct tagtattaaa tctaataaaa tgagcaaaat
481 ggaacgattg ggtcctaatt ctgttaaaac atatgatatt ttgaacagac tggtgaccgc
541 taaggataaa gctcgctatg gccctttggc caaaccggag aggtctccat gcccaaagaa
601 aactaacatt ttcattcatg atgagattca ctattggtca agggatcaac ttgagacttt
661 cctccaagtc cacaggccaa agaatttgtg ggcaactttg gttttccctc cagagatact
721 tgctggttac aaatcgtctg ttttaccatt cctttatcag tttgaaattc atgggaaaga
781 cttggtttat atgcctgatg gagtaagatc tgaaagttac acacagcctc ttgagaatgg
841 ttttttacta agctccagca gcataatcat caaaaacaga gtcacggggg ttgaaatcag
901 gtaccaagtt agtcttgtat attctctggg gtctcaccat ctgtttcata tttacccagc
961 tgaggatcta atgaaagaag aggttaggag atttgggcct tacgaccttt ttgatgtggg
1021 ttcacttttt gtgaaaccag tgcgcgttcc cattcaagat tttccactta gcgtatttaa
1081 gaaaatcttc atctacatga gctcactaaa gaaacctgat gtacaatcag cagtggcaaa
1141 gttgaggcag ttgtctgatg ccgacatttc catagaaagt gtgttcatga ttcaggagtt
1201 tgcaagtagg atagagaaga acggtgtgga gagttggtcc tgctcattct ggggatgcat
1261 gaaggattgg ttctttgaca agttaccata tagggaggtg ttggaaaaaa tagggttggc
1321 tgatgatttc accaggaggt tgatgaagat taaaccatta gcctttgaca ttcacacaac
1381 tgacaggcca ttgacagtca gaatgattat agatcagatc tgggaagaga ggctgagctc
1441 attcgacaac atttcaaata ttgtcttcta tgggagaaga gaatggctca acaatggagt
1501 tttaccaaaa gtaaaaaaaa aaggtttggc caaattgatt cccggaaggg aagttgattc
1561 acacaactac ccaagagaga tatattctga tttgctgtca tccacgtcga tttggaggtc
1621 atatgatgat gacttcagac acaggagtgc tagcccttta gtgatcttga ggtccaatag
1681 agcttactct gaagcagcaa aattcagctc aaattgtctg agtttgtgtg cagcaccctg
1741 tgatgaagtc attgcaagaa ccccttttga attgaatcac agaagagaga agaaggagct
1801 atccctcaaa tgcctggatt ttcatatcaa gaaaatgaag gtgaaaaacg tgctcgagct
1861 tgaggtcaag ctcagagaac gcaacaccag aatttctttg agcaaaaagg gagttaagaa
1921 agcagggaga tcaaggatga ttccagtgca tctgcttaaa ccaacctgcg gtgaaggaaa
1981 tggcaaacct gaagagagga ataaggagga agcaaagatt ccaatgaatg aagggacaag
2041 caaagaagaa aaggggtccg aacctccaca ttctgaagtt aaaagggaag gtgttagatt
2101 ggatgagcaa cacatttcag aacccctttt gagttttaaa ttagacgact tcgtcggaag
2161 ggagaaactt tgttctgctg gtttaatcaa aactgttgga aacgattatc tcttgttagc
2221 cagacaaatt gaatgtatgc cactttctca actcagagga aagaaagcag catacttctg
2281 tcttgacttt ccaatggtgt attttcatga taaagtttct tacccaacat ttgaggcaac
2341 tggggaaatc agacatgtca tgatgaaagc aagaagcaaa tgggggattg atttcaacag
2401 cgcactaatt caagtttata atgatggatg caggttacct ttgcacagtg ataatgagga
2461 gtgttatgac gatgacggga tcctcaccat taacgtcgtg ggagatgcaa agtttcacac
2521 cacctgccat gatgaggtca tagatcttaa acaagggaat gagatattga tgcctgcagg
2581 ttaccaaaag aaaaatagac atgctgtgga ggtcgcttca gaaggaagga caagtgttac
2641 cctcagggtt cacaaaaggg atttcagttt tgagtcaaag cttagattca tcaagggtaa
2701 attcgactgc ctatttgtca gtgtggctga aataatacac aaaaaaccag aggaaatcat
2761 gatgttcatc ccacacatta tggacaggtg tgtgagtaat aggggttgct cacttgatga
2821 tgcaaaagca atatgtgaaa aatatgaaat caaaatagag tgcgaaggcg attgcggctt
2881 ggttgagtgt gggacatcag gtctttccat tggaaggatg ctgcttaggg gaaaccactt
2941 ttctgtcgct tcagttagga ggtcatctat ggattcgctt gctaactcat caaaggagat
3001 caagtcagat ggagtcttag atcacgtaac attcaacttc cacaaaagac tcaaacttgt
3061 tgaacctgat ttgaccaatg cagacatcaa agtggattct tcaagggcag gaaagctgct
3121 caaaagtctg atggatggca tgactggaat tgtttctcac aattcaaccc atgaagggtg
3181 gaggatgatc aaagggataa acagcacctc tgagatgaga tcgttcatga atatggtgag
3241 gggtcaaatt gaagagccca aaagtgatct gtttgacaag gttcaagaac tgaactttat
3301 gaaggtgaag atttatggca ttttcggatt tgctggatca ggaaaaagtc atgcaattca
3361 gaatttaata caaactgaat tcaaaggttc acaagggatt atggtgatct gccccagaag
3421 atttttggca aaagattgga gcgaaaaagg agtggacgaa aaggacatta aaacttttga
3481 gagtgcatta aagtcagatg tcaaaggaaa gagattattt atactggatg aaatcagttt
3541 gctccctaaa ggtttcactg atcttttgat gcttaagatg catatggaag gaatccttaa
3601 aaagtcaaca attgtttgta taggggaccc gctccaggct ggatactttt gtcctaagga
3661 tgacaactac ttgtctaggg aaggagaaat taaacggctt ttcaaaggag gggtaaacta
3721 caaatggtac agttacagaa ttaacaaatt cattgcaaaa aaactggcca tagaaacaat
3781 gaatgacttc attggaatag atgaacaaag ttcgatctac aaagatatgc cgtcagctca
3841 ccacttcatg gaaaagaaag ggaatcatat agaggtcatc ttggttgcca gtatggtgga
3901 aaaggaactt tactccaact atgggaatgt gatgacattt ggggagtcac aaggtttaac
3961 attcaattgt ggagtaatag tactttccga ggaggccaag ctgtgttccg atgcgcatat
4021 aatggttgca atcacaaggt tcagaagagg cttctgcttt gcgttgggga gcaaagggtc
4081 aaaagaagat tatatgaggt caatgaagag cggtctgctt caaagaatat gttcgggcgt
4141 tggtgcttca aaagaattca ttttggggtc ctcctccgtc aacttgattt tgagtgagaa
4201 agacatcgcc aaaggagcag ggattgatga gatggataga gaagctagac tggaaggaga
4261 tgtctggctc aagagtatga tataccttgg aaaaagatat cacatggttg aaccacttgg
4321 tcaagtgatt aagctaactg atgatgcaat taaatgccac attccggttt gttcaagtca
4381 gacactaggt cctgagctcg ataacatcca agcaagagaa tacagagaat ttaaaggaaa
4441 aaatgggtgg tcgaatcagt tcagagaaga agctgggcca aattggaaat tcccttacaa
4501 ggtcaatcaa gcgatgagtt atgaggctgt gtatcccaga cacaaaatgg atgatgatct
4561 cactttcctt gctgccataa agaagaggct tcgctttgac aacgttgcca acaattacgc
4621 aaaattcaag gcagcagaga gcagagggaa gtatctgaca aaaatctttc tcaaacatgt
4681 gcccatcaaa tgtggcaggg accaaaggct cctggatcaa tgcaggcaag aatttgagga
4741 gacgaaacta tctaaaagtg cggccacaat tggagcacac tctcagaggt cagactcgga
4801 ttggcccttg gataagattt tcctgttcat gaaatcgcaa ctttgcacaa aattcgaaaa
4861 aagatttaca gaagctaagg caggccagac tttggcttgt tttccacaca aaattctcgt
4921 ggaatttagc ccatggtgtc gatacacaga aaaggtgctc actgcaaact taccggataa
4981 ttactacatt catcaaagga aaaatttcag tgaattggag gattttgcca gaagattttc
5041 aaatggttca atatgtgtgg aatcagatta tacagctttt gacgtttcac aagatcacac
5101 cattttagca tttgaggtgg aattgctcag acattttggt tgggacgaca gagtccttca
5161 gagttacatt aagatgaagt gtactttggg ttgcagactt ggaggttttg ctataatgag
5221 gttcactggg gaattttcaa cctttctgtt caatacgctt gcaaacatgg ttttcacatt
5281 ttgcagatac gaggttcctg atggaacccc aatctgcttc gccggtgatg acatgtgcgc
5341 tctgagaaac ttgagggaga ttgacaccca tgaattcatc ttgagcaagc tgagtttgaa
5401 ggccaaggtt aacagaacaa aagtgccaat gttttgtgga tggcgattgt gctgcgatgg
5461 tttgatcaaa gaaccttgct taatctatga aaggctgcag gtggcaattg agaatgggag
5521 attgatggat gtgatagact catattttct ggagttttca ttcgcctaca aattaggtga
5581 gaggctctat tcacatcttg aaattgaaca actgaattat catcaggttt taacaagatt
5641 cttcataagg aataaacatc tactcagagg ggattcaagg cataacattt ctgaacttga
5701 gtggttgtct gacgaagatg gcgacaatga taaggggtca cagattgagg atcgcagaag
5761 gggatattcc aattgctggg gtgaaaagct ccagaattta ttctgacatt agccccttca
5821 aaaaggcgtc tgaccttatg atccattgga atgaattcgt tttcaaggtc atgcctgaag
5881 acatagcagg ggatggtttc agattggcgt cgatacctgt gataccctcg tctgaagtgc
5941 aagcagtttt aaggaaaaga gaaagtacaa attatgtgca ctggggggca ctgtccatat
6001 caattgatgc attgttcagg aagaatgcag gggtgtcagg ttggtgttac gtttatgata
6061 acaggtggga gacatttgag caggccatgc tgcagaagtt tcatttcaat ctggatagtg
6121 gttccgccac cttggtgact tcaccaaact ttccagtttc actggatgac cctggcttgt
6181 caaactcaat tagtgtggca gtgatgttcg agaacctcaa ctttaagttt gagagctacc
6241 caattagtgt gagagttgga aatatgtgca ggttctttga tagcttcttg agcagtgtta
6301 agaataaagt tgactcaaat tttttgcttg aagcttcgaa tgcagatccg ctgggagtgg
6361 gtgcttttgg atttgagcaa gatgaccaag ttagtgaact tttcaattac attcaaacgg
6421 tcccaactca agccatcaaa ttcagagagc atgagatacc taaagggttt ttgggtatga
6481 tgggaaagaa aaagatcaaa tcttttgagt ttgcctcagg ttcaaagggt atggagagaa
6541 ggaaaccaaa tagaggaaag caaattgaca gatcattcag ccaaagggct gtccctggat
6601 ttaggtccca gaatgagaag gttgaacatc aaggcttatc aacagacagc gatttcgaga
6661 attttctcag aaacaagagg ggtaataaag ctggagttaa atccactgct tcagaagggt
6721 catcagttga taacatttct tcaagagaat ttcagtttgc tcgacagaac caggcgaagg
6781 aggatggcag cagttctgaa tttgcagctc aaggtggacg caagtctaaa ggcatttctg
6841 ggcgcagaaa acagacctct tcatggaaag acaggggcaa ccctggaaca gatactggag
6901 tccatcttcg cgaacatagc gatccaggga acgtcagagc agacggagtt tctggaccta
6961 gtggtggaag tgaaatcaat ggaggatcaa tcagtcctcg ggtcttacaa cctgaaggaa
7021 gtggtcaact tgatcaaagc tttcaagact acctcttcgg acccgaacat caacaaaatg
7081 acattccgtc aggtctgtga agctttcgca ccagaggcaa gaaatggact ggtcaaattg
7141 aaatacaaag gggtttttac aaacctcttt acaactatgc cggaagtggg gagcaagtac
7201 ccggagctaa tgtttgattt caataagggt ctgaatatgt tcatcatgaa caaggcccag
7261 cagaaagtta taaccaatat gaatcggcgt cttttacaga ctgaattcgc aaagagcgag
7321 aacgaggcaa agctctcgtc tgtgtcgact gatctttgca tttagtctgt tcaggaagtt
7381 tggttcaata aataaaataa acaaatagtg tgttgtgtgc tcaagtgtgt ttactttaag
7441 catgtttacg caaataaact cttgaaccca tgaaagagta taaagagtca tggtatttaa
7501 ttggagtgtt tagacttata ataaatagcc tgtagacttt taaatatttt actac
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