GenBank-Updates@genbank.bio.net (02/06/91)
LOCUS COCPGN1 2783 bp ds-DNA PLN 06-FEB-1991
DEFINITION Cochliobolus carbonum endopolygalacturonase gene, complete cds.
ACCESSION M55979
KEYWORDS endopolygalacturonase;
poly-alpha-1,4,-galacturonide glycano hydrolase; polygalacturonase.
SOURCE Cochliobolus carbonum (strain SB111) DNA, clones pCC[35,63].
ORGANISM Cochliobolus carbonum
Eukaryota; Plantae; Thallobionta; Eumycota; Ascomycotina;
Loculoascomycetes; Loculoedaphomycetidae; Pleosporales;
Pyrenophoraceae.
REFERENCE 1 (bases 1 to 2783)
AUTHORS Scott-Craig,J.S., Panaccione,D.G., Cervone,F. and Walton,J.D.
TITLE Molecular cloning of the gene for endopolygalacturonase from the
maize pathogen Cochliobolus carbonum and analysis of its role in
disease
JOURNAL Unpublished (1990)
STANDARD full staff_entry
FEATURES Location/Qualifiers
CDS join(727..1110,1168..1878)
/EC_number="3.2.1.15"
/gene="PGN1"
/product="endopolygalacturonase"
mat_peptide join(808..1110,1168..1875)
/gene="PGN1"
/product="endopolygalacturonase"
sig_peptide 727..807
/gene="PGN1"
/codon_start=727
intron 1111..1167
/gene="PGN1"
BASE COUNT 652 a 838 c 630 g 663 t
ORIGIN
1 aagcttctca gggcccgaga ccctcagcgg cccctctcac actccctccc cccttcatat
61 agattaagct agttgttcca tcaatcggtc gtactcggca gtgtaaacac gcaacccgtg
121 ttcggcatcc acgtgccgac tagggcgcta cgccacagca gcgccacgct tctgtatccc
181 gtctttgacc aaaacatgtt tcaccatgcc gctgtaattt cgtttcagca tgggtcggca
241 cacccattgc cggtttgttt tgcaaatctg agatgagata ttgtaagctc cgccgaacgg
301 ctcgcagcgc tgatggctga cacagtgcaa aggataaata ctaagatacg ttctaagacc
361 caaatcttcc agaatacgaa gatacaatct acgaacgttc cgcaacgcgg agaaatcgat
421 caggtggatc ctccaatgct tgtcattccg gttctttact actcatgtcc atccaaaacg
481 tggcctagcg cagtgtcaag cattgcctag agcgacaagc ctccgagatt ctagagctag
541 agttagctta acacgacctg tggggaagcc agtctctact gccccctcat gtttggggcc
601 cttgtataag tactgtagcg ttgcctcctt atttccagta tcaatcaaca cattccttcc
661 cttattcttt tgattctata gctacatatt cagttctgag ttctgctttt gcccacatct
721 agcaaaatgg tcgcatatgc tctcacttcg atgcttctga gcgctggtgc gctcgtcgct
781 gccgccccat caggtcttga tgcccgcgat ggctgcactt tcaccgatgc tgcgactgct
841 atcaagaaca aggcctcttg cagcaacatt gtcatcagcg gcatgacagt tcctgctggt
901 accaccctgg acctcacggg cttgaagtcc ggtgccaccg tcaccttcca gggcacaacg
961 acctttggat acaaggagtg ggaaggtcct ctcatctccg tctccggaac taacatcaaa
1021 gtggtgggtg cctccggcca caccattgat gccgctggtc agaagtggtg ggacggaaag
1081 ggatccaacg gcggcaagac caagcccaag gtaagcgatg agttcactga aagttaatct
1141 gaactgtagt ctgactaacc aatccagttc ttctacgctc actccctgac cacatcctca
1201 atcagcggac tcaacatcaa gaacactccc gtccaggcct tctccatcaa cggtgtcacc
1261 ggcttgactc ttgaccgcat caccatcgac aactctgcag gcgactcagc cggcgcccac
1321 aacaccgacg ccttcgacat tggcagctcc agcggcatca ccatctccaa cgccaacatc
1381 aagaaccaag acgactgcgt cgccatcaac tccggcagcg acatccacgt cacaaactgc
1441 cagtgctccg gcggccacgg cgtctccatc ggctccgttg gcggccgcaa ggacaacacc
1501 gtcaagggcg tcgtcgtcag cggcaccacc atcgccaact cggacaacgg cgtccgcatc
1561 aagaccatct ccggcgccac tggctccgtc tccgacatca cctacgaaaa catcaccctc
1621 aagaacatcg ccaagtacgg catcgtcatc gagcaggact acctcaacgg cggcccaact
1681 ggcaagccca ccactggcgt ccccattacc ggtgttacgc tcaagaacgt tgccggtagc
1741 gttactggat ccggcaccga gatctacgtc ctttgcggaa agggaagctg ctccggctgg
1801 aactggtccg gtgtcagcat taccggtgga aagaagagct ccagctgcct taacgttcct
1861 tctggcgctt cttgctaagc ggccaaggca acttttcttg ggagagagaa aaagcgacta
1921 aggtgttcgg tcagaggccg atgccaacta ccccttaatt cttcttgtat atcttcgttt
1981 catatatata tatatctgaa tggcatagag tgcctggctc aacttttctt tttgcttctc
2041 atgcttgatg tgatatatct gtgcttctgt cttatccttg tttgatctgc atagttgatc
2101 tgcatagttg tagtcttcta gtgcgtacca tgtcaaactc tatcgctcct atataagcag
2161 caactataca tttagtctca tcaccagtcc cactagcgca ccgttgttta aacgataaag
2221 catacgctta cttcacacgt actaaaacaa cacgcagcca tacgatccat tatatccaca
2281 ttcgttaaca cataaataca tccgttcctc caccactccc catatatcac accctctcca
2341 accaaatcaa cttactctga taatccattg ggtcccacct cacattaata cccccattca
2401 tatacgtcgc cccactatac gtcccattat ccaaatcatt cctatacctc gccttgggat
2461 ccagaccctg cagcctaacg gggggagcag cgggtttaat cttcatagcc tgttggaacg
2521 caaagacgat gctcttcgcg ccatccgggc tcacaaactg tactgcgggc caattcgact
2581 gtgcggggtg tgcgaggcgg tagaagtcac ctgaaatgac gatggggttt acctcttttg
2641 cggcggccat gatggcgggg acggcggagg cttcttcggc ggagagctcc gaagggttga
2701 gttcaaggcc gaaggagccg cacatcatgg ctacgtgacc gcggtattcg aagctgatgt
2761 tgcggttggt gaggtggttg ggg
//