GenBank-Updates@genbank.bio.net (02/09/91)
LOCUS LACXYLAA 4560 bp ds-DNA BCT 09-FEB-1991
DEFINITION L.pentosus xylose repressor (xylR) gene, 3' end and D-xylose
isomerase (xylA) and D-xylulose kinase (xylB) genes, complete cds.
ACCESSION M57384
KEYWORDS D-xylose isomerase; D-xylulose kinase; xylose repressor.
SOURCE L.pentosus (strain MD353) DNA.
ORGANISM Lactobacillus pentosus
Prokaryota; Bacteria; Firmicutes; Regular asporogenous rods;
Lactobacillaceae.
REFERENCE 1 (bases 1 to 4560)
AUTHORS Lokman,B.C., van Santen,P., Verdoes,J., Leer,R.J., Posno,M. and
Pouwels,P.H.
TITLE Organization and nucleotide sequence of three genes involved in
D-xylose catabolism in Lactobacillus pentosus
JOURNAL Unpublished (1990)
STANDARD full staff_entry
FEATURES Location/Qualifiers
CDS 277..1443
/gene="xylR"
/codon_start=1
/partial
/product="repressor protein"
CDS 1555..2904
/EC_number="5.3.1.5"
/gene="xylA"
/codon_start=1
/product="D-xylose isomerase"
CDS 2971..4476
/EC_number="2.7.1.17"
/gene="xylB"
/codon_start=1
/product="D-xylulose kinase"
BASE COUNT 1330 a 813 c 1110 g 1307 t
ORIGIN
1 ctgcagaaat taaggttgaa cgagctaatg ggcgcattgt gatcaataca gtgggactaa
61 caggcgattc aaccgtctat gtacatgaga ataatgatac gattaagtta tctttggtgg
121 acggaaaagc ggaagtaacg ctttagtaag aatttgacag gtaattgagc ggtcatcaca
181 ttcttgtgac ggccgctttt caattgtaac ctgactattt ttttgttaga ttaagttaga
241 gatttactaa ttataggatt acgagagggt gatgtcgtgg agaaccgaag catcagtcgt
301 acacagttac gaaaccggaa cttaaagctg gtcttacaac agattattaa tcatcctgca
361 acttccagaa ttgcgatttc acatgaattg aatttaaata aatcaacgat ttcatcgcta
421 tataatagct tgtcagctga tcattttatt gaagaacttg gagaaggcgc tgcatctaac
481 gtgggtggtc gaaagccaat catggcgcgg ttaaataaaa aatacggcta tacgattact
541 ttcgatctgg gttatcgtca gttacatgcg atggcaaatt atttagacgc tgaaattatt
601 gattatcagg aaattgatac caagggacgg cccatcgaag ccatgttaga tgactgccgg
661 cactttgtac aagagatgca aacacaagtt catgcgattc atggcttatt aggcatttgt
721 ttctcgattc atggtattat caatgataat cagattgtcc attcaccatg gattgacatg
781 cacgatatcg atattgtgaa gcaatttaaa gctgagtttg atgtgcccgt tatattagag
841 aatgaagcta atttgtcggc gatttatgaa cgtgacttta atgccggact ggattatcgt
901 aactcaatca ctttgagcat tcatcgcggt attggtgcgg ggattattct ggataagcac
961 ttgttccgag gtaaacaggg tgaggccgga gaagtcggtc ggtcgttaac gctgctagga
1021 ccaaatacag cggggcaatc ggtggagtcg atatgttctg aggaagcgat cattaaccgg
1081 gtcaaacgga tcaaacaaga cgagacgact aatcgtcaaa ccgttgttca gttataccaa
1141 caacatgatc gggaagttga acggattctt tcacaatcgt gcagtgtgat tgcgggcctt
1201 atatacaacg ttgtgacaac cttgaatcca gatgcaatct tcattaattc ggaattgtta
1261 gcggagacgc cagaattact aggtgatatt caagataatt atcgtgatat tgctcaggat
1321 cagttgccaa tcacattgac taagaatacc caatttgcaa cttctttggg cgggtgttca
1381 ttaattacgc actatgtgtt gggcatggtt gactatgaat tgcaatttaa agaagcggat
1441 taaccgcttc ttttattttt ttgttctaga aagcgtttac aaaaataagc caatgccgct
1501 gtaatcttac ttgtaggttg gttgccgaaa caaactaact tggaggcaag aattatgaca
1561 aacgaatatt ggcaaggcgt cgatcaaatt aagtatattg gtcatcaaga taaaaagtca
1621 ggactagggt ttcaatatta caatcctgat gaagttattg gtggcaagaa gatgcgtgac
1681 tggttacgat tctctgttgc ttattggcac acatttgatc aacggctagt agatccattt
1741 ggtgatggaa ccgcacaacg gccttatgac catatcacag acccaatgga cttggcgtta
1801 gcaaaggtag atgcagcgtt cgaattctat cacaaattag gtgttgatta tctctgtttc
1861 catgatcgtg atttagctcc tgaaggtgac acgctgcggg agactaatcg taacttggat
1921 aaggttattg ataaaatcgt cgattatcag aaacagactg gcatgaaggt actatggaac
1981 acgtctaata tgtttacgaa tccacgattt gtagcagggg ctgcaacgtc accagatgcg
2041 gatgtctttg cgtatgcggc tgcgcagtta aagcacagcc tggaaatcgg gaaacgtgtc
2101 ggtgctgaaa actatgtctt ctggggtggc cgtgaaggtt atgaatctct gtggaacacc
2161 aatatgaagc tagaacaaga gcatgctgcc aagttcttcc atatggctaa ggattatgcc
2221 aacgaaattg gatttgatgc acaaatgttg ctggaaccga aacctaagga accatcgaca
2281 catcaatatg actttgatgc agcaacgaca attgcgttca tgaaagagta tgatttggat
2341 aaagacttca agcttaattt ggaaggcaac catgccaatt tagcaggaca tacctatcaa
2401 catgaaattc gagtggcccg tgaagccaac ttacttggtt cattggatgc taaccaaggt
2461 gataagttaa tcggttggga tattgatgaa ttcccatcag acctgtatga agcaactgct
2521 gcaatgtatg aagttgttga aaatggtagc attgggccac ggggtggttt gaattttgat
2581 gctaagccac gccggagttc atttgcggct aatgatttgt tctatggcca tatcgttggg
2641 attgacacct ttgctgctgg attgcgggtc gcacttaaga tgaagcaaga cggtttctta
2701 gaaaaattgg ttgcagaccg ttatagctct tatcaaagtg gtgttggtgc cgaaatcgaa
2761 gctggaacgg ctgacttcaa atcactagaa tcatatgcca ttgataagcc tcaatcagag
2821 ttaattgccg ccacttcttc agatcctcta gaagaggtta aggatacaat taatcattat
2881 attatcgaga cgttaagtaa ataagagatg taaaaacgcg cttgaggctt gaacttcggc
2941 gtgtttttat atatgtgagg aggatgcaaa atgtcagcag ttgtattagg aattgattta
3001 gggacgagtg cggttaaggt ctcggcaatt gataagcaag ggaatgtcgt ggcccaagct
3061 agtgctaaat atgcattaca acagcctcat cctggctata gtgagcagga tccagaagac
3121 tgggtgaccc aaacaacgca agcaattcgt gaattgttgc agcagtctga ggttactgca
3181 gaccagattg aaggattaag ttactctgga caaatgcatg gcttagtttt attagatgaa
3241 tcagccactg tgttgcggcc cgcaattttg tggaatgata ctagaacgac gtctcaatgt
3301 cgagaattag aatcacaatt tggcgatgac tttattaaga taacgggtaa ccgaccgctg
3361 gagggattca cgttaccgaa attgttatgg gttaaagaaa acgaacctaa catttggaag
3421 cgtgcacgga cattcttgtt acccaaagac tatttgcgtt atcgaatgac agggaagttg
3481 gcgatggaca agtctgatgc gaccggaaca gtattgttgg atattacaac cagtcagtgg
3541 agtgagactt tgtgcaatca gctagatatt ccgttgacac tgtgtccgcc attaattgaa
3601 tcgactgctt atgtgggtca tattaatcaa acctatgccc aattatcggg attatccgtc
3661 aatactaaag tgtttggtgg agcggctgat aatgcggctg gagccgttgg ggcgggtatt
3721 ttatcttcag ataaagcact agttagcatt gggacctcag gagtagtttt aaagtatgaa
3781 gataatgcgc agacggatta tcgtggcgtt ttacaatatg aacggcatgc atttcccggg
3841 aaatattatt caatgggggt cacattggcg gccggatatt cattgaattg gttcaaacaa
3901 acctttgcac ccgatgagga tttcggaaca gttgttgcta gtgctgagca atctaccatt
3961 ggtgccaacg gcttgttatt tgccccgtat attgttggtg agcgagcgcc atatgcggat
4021 gcaaccattc gcggaagttt cattggtgtg gatggtagtc accaacgcgc tgattttgta
4081 cgggcggtct tagagggaat tatcttttca tttgaagatt tgatcaagct atatcagcat
4141 aatggtgctg agtttaagac aattgtttca attggtggcg gtgctaagag cgcgttgtgg
4201 ttacaaattc aagctgatat ttttaattgt aaagtggtca gtctgaaaaa tgagcaaggc
4261 cctggaatgg gcgcagcaat gattgcagcg actggtttgg gctggttcaa aacgctagct
4321 gattgtgcgc agacgtttgt tcattacggt aaggcatatt atccggttac cgcgcatgtt
4381 gcacaatatc aggaaatgta tcggttatat caacaaatat acgttcaaac gcagccaatc
4441 actgctggac tattggaaca aaggaaacaa cactaaatta aaggtaacga ggtaaaatcg
4501 cattgatgta tagacttttt tgaattcttc tatacgacaa tgcgattttt tacgtgtctt
//