GenBank-Updates@genbank.bio.net (02/19/91)
LOCUS VACHAGMA 1521 bp ds-DNA VRL 19-FEB-1991
DEFINITION Vaccinia virus hemagglutinin gene.
ACCESSION M58337
KEYWORDS hemagglutinin.
SOURCE Vaccinia virus DNA.
ORGANISM Vaccinia virus
Viridae; ds-DNA enveloped viruses; Poxvirinae; Orthopoxvirus.
REFERENCE 1 (bases 1 to 1521)
AUTHORS Brown,C.K., Bloom,D.C. and Moyer,R.W.
TITLE The nature of naturally occurring mutations in the hemagglutinin
gene of vaccinia virus and the sequence of immediately adjacent
genes
JOURNAL Virus Genes (1990) In press
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS 233..310
/product="hemagglutinin"
/codon_start=233
allele 278..278
/note="g in allele"
allele 288..288
/note="t in allele"
allele 301..302
/note="a in allele; deletion which causes frameshift and
truncated protein"
allele 550..551
/note="aa in allele"
allele 815..815
/note="t in allele"
allele 871..872
/note="aag in allele"
allele 888..888
/note="c in allele"
allele 980..981
/note="acaatg in allele"
allele 982..982
/note="t in allele"
BASE COUNT 558 a 279 c 247 g 437 t
ORIGIN
1 cgaactaata catctgaaac atacgataaa gaaaaagatt gttggacatt ggataatggt
61 cacgtgttac cacgcaatta tataatgtat aaatgcgaac cgattaaaca taaatatcca
121 ttggaaaaaa cacagtacac gaatgatttt ctaaagtatt tggaaagttt tataggtagt
181 tgatagaaca aaatacataa ttttgtaaaa ataaatcact ttttatacta atatgacacg
241 attaccaata cttttgttac taatatcatt agtatactct acaccttctc ctcagacatc
301 taaaaaatag gtgatgatgc aactctatca tgtaatcgaa ataatacaaa tgactacgtt
361 gttatgagtg cttggtataa ggagcccaat tccattattc ttttagctgc taaaagcgac
421 gtcttgtatt ttgataatta taccaaggat aaaatatctt acgactctcc atacgatgat
481 ctagttacaa ctatcacaat taaatcattg actgctagag atgccggtac ttatgtatgt
541 gcattcttta tgacatcgcc tacaaatgac actgataaag tagattatga agaatactcc
601 acagagttga ttgtaaatac agatagtgaa tcgactatag acataatact atctggatct
661 acacattcac cagaaactag ttctgagaaa ccagaggata tagataattt taattgctcg
721 tcggtattcg aaatcgcgac tccggaacca attactgata atgtagaaga tcatacagac
781 accgtcacat acactagtga tagcattaat acagtaagtg caacatctgg agaatccaca
841 acagacgaga ctccggaacc aattactgat aaagaagatc atacagttac agacactgtc
901 tcatacacta cagtaagtac atcatctgga attgtcacta ctaaatcaac caccgatgat
961 gcggatcttt atgatacgta caatgataca gtaccatcaa tacactagtg atagcattaa
1021 tacagtaagt gcaacatctg gagaatccac aacagacgag actccggaac caattactga
1081 taaagaagat catacagtta cagacactgt ctcatacact acagtaagta catcatctgg
1141 aattgtcact actaaatcaa ccaccgatga tgcggatctt tatgatacgt acaatgatac
1201 agtaccatca actactgtag gtagtagtac aacctctatt agtaattata aaaccaagga
1261 ctttgtagaa atatttggta ttaccgcatt aattatattg tcggccgtgg caatattctg
1321 tattacgtat tatatatgta ataaacgttc acgtaaatac aaaacagaga acaaagtcta
1381 gatttttgac ttacataaat gtctgggata gtaaaatcta tcatattgag cggaccatct
1441 ggttcaggaa agacagccat agccaaaaga ctatgggaat atatttggat ttgtggtgtc
1501 ccataccact agatttcctc g
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