GenBank-Updates@genbank.bio.net (02/23/91)
LOCUS PSERPODA 2276 bp ds-DNA BCT 23-FEB-1991
DEFINITION P.aeruginosa rpoDA gene encoding principal sigma factor.
ACCESSION D90118
KEYWORDS principal sigma factor; rpoDA gene.
SOURCE Pseudomonas aeruginosa (strain PAO1) genomic DNA, clone pASB3.
ORGANISM Pseudomonas aeruginosa
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Pseudomonadaceae.
REFERENCE 1 (bases 1 to 2276)
AUTHORS Tanaka,K. and Takahashi,H.
TITLE Nucleotide sequence of the gene (rpoDA) for the principal sigma
factor of Pseudomonas aeruginosa
JOURNAL Unpublished (1990)
STANDARD full staff_entry
COMMENT These data kindly submitted in computer readable form by:
Hideo Takahashi
Institute of Applied Microbiology, University of Tokyo
1-1-1 Yayoi
Bunkyo-ku, Tokyo-113
Japan
Phone: 03-812-2111 x7826
Fax: 03-813-0539
FEATURES Location/Qualifiers
misc_signal 45..72
/note="heat shock promoter"
misc_binding 290..297
/note="SD sequence"
CDS 302..2155
/note="principal sigma factor (rpoDA)"
misc_signal 2161..2195
/note="transcription terminator"
BASE COUNT 525 a 725 c 681 g 345 t
ORIGIN
1 ctgcaggccc tgggcgagaa ggagtggctg atcgtccagg agaaccttga aaagcagttc
61 ttcgacacca ttactaaact ctccgagagc cagcgtttcg gcgagcggga ggagcgttta
121 cgcagcgtca tgcagaagag ctacagtgaa ctgaccgatg aagagaaagc cttgctcaga
181 gagcactaca gtgttgccgc ttcatcgcct tcccagagct gaactggcgc ctcagcccag
241 gcatcaggta taatcctctg cttatttttt gcccgccaag accttcagtg gatagggtgt
301 tatgtccgga aaagcgcaac agcaatctcg tctgaaagag ttgatcgccc gaggccgtga
361 gcagggatac ctgacttacg cggaggtcaa cgaccacctg ccggaggata tttccgatcc
421 ggaacaggtg gaagacatca tccgcatgat caacgacatg gggatcaacg tattcgagac
481 agccccggat gcggatgccc tgttgctggc cgaggcggat accgacgaag ccgcagcgga
541 agaagccgca gcggccctgg ccgcggtgga aagcgacatc ggtcgcacca ccgacccggt
601 gcgcatgtac atgcgtgaaa tgggtaccgt ggaactgctg acccgcgaag gcgagatcga
661 aatcgccaag cgcatcgagg aaggcatccg cgaagtgatg agcgccatcg cccagttccc
721 gggcacggtg gacagcatcc tggccgacta caatcgcatc gtcgccgaag gcggtcgcct
781 ctccgacgtc ctcagcggct atatcgatcc cgatgacggc agcctgcccg ccgaagaggt
841 ggagccggtc aacctgaagg acgattccgc cgactcgaaa gagaaggacg acgaggaaga
901 agaaagcgac gacagcagcg acagcgacga cgaaggcgac ggcggtccgg atccggaaga
961 agcccgcctg cgtttcaccg cggtctccga gcagctcgac aaggccaaga aggccctgaa
1021 gaagcacggt cgcggcagca agcaggccac cgccgaactc accggcctgg ccgagctgtt
1081 catgccgatc aagctggtgc ccaagcagtt cgacgccctg gtcgcccgcg tgcgctccgc
1141 cctggaaggc gtgcgcgccc aggaacgcgc catcatgcag ctctgcgtgc gtgacgcgcg
1201 catgccgcgt gccgacttcc tgcgcctgtt cccgaaccac gagaccgacg agaagtgggt
1261 cgacagcgtc ctgaagagca agccgaagta cgccgaggcc atcgagcgcc tgcgcgacga
1321 catcctgcgc aaccagcaga agctggcggc cctggaaagc gaggtcgagc tgaccgtcgc
1381 cgagatcaag gaaatcaacc gcgcgatgtc gatcggcgaa gccaaggctc gccgggcgaa
1441 gaaggaaatg gtcgaggcca acctgcgcct ggtgatttcc atcgccaaga agtacaccaa
1501 ccgcggcctg caattcctcg acctgatcca ggaaggcaac atcggcctga tgaaggcggt
1561 ggacaagttc gaataccgtc gcggctacaa gttctccacc tacgccacct ggtggattcg
1621 ccaggcgatc acccgttcga tcgccgacca ggcacgcacc atccgcatcc cggtgcacat
1681 gatcgagacg atcaacaagc tcaaccgcat ctcccgccag atgctccagg aaatgggtcg
1741 cgagcccacc ccggaagagc ttggcgagcg catggacatg cctgaggaca agatccgcaa
1801 ggtactgaag atcgccaaag agccgatctc catggaaacc ccgatcggtg acgacgaaga
1861 ttcgcacctg ggcgatttca tcgaggactc caccatgcag tcgccgatcg agatggcgac
1921 cagcgagagc ctcaaggaat ccacccgcga agtcctcgcc ggcctcactg cccgggaagc
1981 caaggtgctg cgcatgcgct tcggcatcga catgaacacc gaccacaccc tcgaggaagt
2041 cggcaagcag ttcgatgtga cccgcgagcg gatccgccag atcgaagcca aggcgctgcg
2101 caagctgcgc catccgtcgc gaagcgagca ccttcgctcc ttcctcgacg agtgacgaac
2161 gaacccccgg cctgaaaaac cgggggtttt tctttgccgc ttgccccgcc gcccggcgtc
2221 tacacttccg cttatattcc cgtccaccgc gagaccgcct catgcagcgt ctgcag
//