GenBank-Updates@genbank.bio.net (02/23/91)
LOCUS BLVGPE 7933 bp ss-RNA VRL 23-FEB-1991
DEFINITION Bovine leukemia virus (proviral) gag, pol and env genes.
ACCESSION D00647
KEYWORDS env gene; gag gene; glycoprotein; pol gene; provirus.
SOURCE Bovine leukemia virus (Australian isolate) proviral DNA, clone
pBLV-A1.
ORGANISM Bovine leukemia virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Retroviridae; Oncovirinae; Type C oncovirus group; Mammalian type C
oncoviruses.
REFERENCE 1 (bases 1 to 7933)
AUTHORS Coulston,J., Naif,H., Brandon,R., Kumar,S., Khan,S., Daniel,R.C.
and Lavin,M.F.
TITLE Molecular cloning and sequencing of an Australian isolate of
proviral leukaemia virus DNA: Comparison with other isolates
JOURNAL J. Gen. Virol. 71, 1737-1746 (1990)
STANDARD full staff_review
COMMENT These data kindly submitted in computer readable form by:
Martin F. Lavin
Queensland Institute of Medical Research
Bramston Terrace
Herston Qld 4006
Australia
Phone: 07-253-6214
Fax: 07-252-5499
Telex: QIMRBR AA145420
FEATURES Location/Qualifiers
CDS <2318..4876
/note="pol protein"
LTR 1..531
/note="5' LTR"
CDS 629..1807
/note="gag protein"
CDS 4822..6369
/note="precursor of env protein"
sig_peptide 4822..4920
/note="signal peptide of env protein"
mat_peptide 4921..5724
/note="gp51 surface glycoprotein (env)"
mat_peptide 5725..6366
/note="gp30 transmembrane protein (env)"
BASE COUNT 1759 a 2632 c 1673 g 1869 t
ORIGIN
1 tgtatgaaag atcatgccga cctaggagcc gccaccgccc cgcgcgaacc agacagagac
61 gtcagctgcc agaaaagctg gtgacggcag ctggtggcta gaatccccgc acctccccaa
121 cttccccttt cccgagaaat ccacaccctg agctgctgac ctcacctgct gataaattaa
181 taaaatgccg gccctgtcga gttagcggca ccagaagcgc tcttctcctg agaccctcgt
241 gctcagctct cggtcctgag ctctcttgct cccgagacct tctggtcggc tatccggcag
301 gcggcaggta aggcaagcac ggtttggagg gtggttctcg gctgagacca ccgcgagctc
361 tatctccggt ccttgaccgt ctccacgtgg actctctctc ttgcctcctg accccgcgct
421 ccaagggcgt ctggcttgca cccgcgttcg tttcctgtct tactttctgt ttctcgcggc
481 ccgcgctctc tccttcggcg ccctctagcg gccaggggag accggcaaac aattgggggc
541 tcgtccggga ttgatcaccc cggaacccta aaacttctct ggacccaccc cctcggcggc
601 gtcttgggtc tttccttcaa atcatatcat gggaaactcc ccctcctata acccccccgc
661 tggcatctcc ccctcagact ggctcaacct cctgcaaagc gcgcaaaggc tcaatccacg
721 accctccccc agcgatttta ccgatttaaa aaattacatc cattggtttc ataagaccca
781 gaaaaaacca tggactttca cttctggtgg ccccgcctca tgcccacccg ggaaattcgg
841 ccgagttccc cttgtcttgg ccaccctaaa cgaagtgctc tcaaacgatg agggcgcccc
901 gggtgcatcg gccccagaag aacaaccccc cccttatgac cctcccgctg ttttaccaat
961 catatctgaa gggaatcgca accgccaccg cgcttgggca ctccgagaat tacaagatat
1021 taaaaaggag attgaaaata aggcaccggg gtcgcaagta tggatacaaa cgctacgact
1081 tgcaatcctg caggccgacc ctacccctgc tgacctagaa cagctttgcc aatatattgc
1141 ttccccggtc gaccaaacgg cccacatgac cagcctaacg gcggcaatag ccgctgaagc
1201 ggcaataccc tccagggttt taatccccaa aatgggaacc ctgacccaac aatcagctca
1261 gcccaacgcc ggagatctta ggagtcaata tcaaaacctc tggcttcagg ctggaagaat
1321 ctccctactc gtccttcagg tacaaccctg gtccaccatc gtccagggcc ccgccgagag
1381 ctatgtagag tttgtcaacc ggttacaaat ttcattagct gacaaccttc ccgacggagt
1441 ccctaaagaa cccattattg actcccttag ttatgcaaat gccaacaaag aatgccaaca
1501 aattttgcag gggcggggct tagtggccgc cccggtggga caaaaactgc aggcttgtgc
1561 acactgggcc cccaagacta aacagcctgc aatcctcgtc cacaccccag ggcccaagat
1621 gcccgggcct cggcaaccgg cccccaaaag gccccccccg ggaccatgct atcgatgcct
1681 caaagaaggc cattgggccc gggactgtcc caccaaaacc accggccccc ctccgggacc
1741 ttgtcccata tgtaaagatc cttcccattg gaaacgagac tgtccaaccc tcaaatcaaa
1801 aaactaatag aggggggacc tagcgccccc caaatcataa cacctataac agattctctc
1861 agtgaggccg aattagaatg cttactttct attcctctgg ctcgcagccg tccctccgtg
1921 gctgtatacc tgtctggccc ctggctgcag ccctctcaaa atcaagccct catgctcgtg
1981 gacaccgggg ctgaaaatac ggtcctccca caaaattggc tggttcgaga ttacccacgg
2041 acccccgccg cggtactcgg agcgggagga atctcccgga acagatacaa ttggctacaa
2101 ggccctctga ccctggctct aaaaccagag ggtcccttta tcaccatccc aaaaatttta
2161 gttgacacct tcgataaatg gcaaatttta ggacgggacg tctctcccgc ctacaggctt
2221 ctatctccat acctgaggaa gtacaccccc ctgtggtagg cgtcttagat gcccccccga
2281 gccacattgg attagaacat ttgccccccc cacctgaggt acctcaattc cctttaaact
2341 agaacgcctc caggcccttc aagacctggt ccatcgctct ctggaggcag gttatatctc
2401 cccctgggac gggccaggca ataatccagt cttcccggta cggaaaccaa atggtgcctg
2461 gaggtttgtg catgatctac gagttacaaa tgctcttaca aagcccatcc cggcactctc
2521 ccccggaccg ccagacctta ccgctatccc cacacacctt ccacatatca tttgtttaga
2581 tctcaaagat gccttcttcc agattccagt cgaagaccgc ttccgctcct actttgcttt
2641 taccctccct acccccgggg gacttcaacc tcatagacgc ttcgcctggc gggtcctacc
2701 tcaaggcttc attaacagcc cagctctttt cgaacgggca cttcaggaac cccttcgcca
2761 agtttccgcc gccttttccc agtctcttct ggtgtcctat atggacgata tcctttacgt
2821 ttcgcctaca gaggaacaac ggttacaatg ttatcaaact atggctgccc acctccggga
2881 cctagggttt caggtggcgt ctgaaaagac tcgccagacg ccttcgcctg tccctttctt
2941 gggacaaatg gtccatgagc ggatggtcac ctaccagtcc ctacctacct tgcagatctc
3001 atccccaatt tctcttcacc aattacagac ggtcttggga gacctccaat gggtctctag
3061 gggcacaccc actacccgcc ggcccctgca acttctatac tcttctctta aaggcatcga
3121 tgacccaagg gccatcatcc acctttcccc ggaacagcag cagggcattg cagagcttcg
3181 acaagccctg tcccataacg caagatccag atataacgag caggaacccc tgctggccta
3241 cgtacacctc acccgggcgg ggtccaccct ggtactcttc cagaagggcg ctcaatttcc
3301 cctggcctac tttcagaccc ccttgactga caaccaagcc tcaccttggg gcctccttct
3361 cctgctggga tgccaatatc tgcaggctca ggccttaagc tcctatgcca agaccatact
3421 caaatactat cacaatcttc ctaaaacctc tctagacaat tggatccaat catctgagga
3481 ccctcgagtt caggagttgt tgcaattgtg gccccagatt tcctctcagg gaatacagcc
3541 cccgggcccc tggaagacct tagtcaccag ggcagaggtt tttttgacgc cccagttctc
3601 ccctgaaccg atccctgcgg ccctttgcct ctttagtgac ggggctgcaa gacgaggagc
3661 atattgctta tggaaagacc accttttgga ctttcaggcc gttccagctc cagagtccgc
3721 ccaaaaggga gaactagcag gtcttttggc gggcttagca gccgccccgc ctgaaccttt
3781 aaatatatgg gtagattcca aatacctgta ctccttgctc agaaccctag ttctaggagc
3841 ttggcttcaa cctgaccccg taccctctta tgccctccta tataaaagcc tcctccgaca
3901 tccagcaatc tttgttggtc atgttcggag ccactcttca gcatcccacc ctattgcttc
3961 cctgaacaat tatgtagatc aactgcttcc cttagaaact ccagagcaat ggcataagct
4021 cacccactgc aactctcggg ccttgtctcg atggccgaac ccacgtattt ctgcctggga
4081 tccccgttcc cccgctacgc tgtgtgaaac ctgtcaaagg ctcaacccaa ctggaggcgg
4141 aaagatgcgg actattcaga gagggtgggc cccaaatcat atctggcagg ccgatataac
4201 tcattataaa tacaaacagt tcacctacgc tttgcacgtg tttgtagata cttactctgg
4261 agctactcat gcctcagcaa agcgagggct caccactcaa acgaccattg agggccttct
4321 tgaggccata gtgcatctag gtcgtccaaa aaagctaaac accgaccaag gtgctaacta
4381 cacctccaaa acctttgtca ggttttgcca gcagttcgga atttcccttt ctcatcatgt
4441 tccctacaac cccacaagtt cagggttagt ggaacggaca aatggactgc tcaaacttct
4501 tttgtctaaa tatcacttag acgaacccca ccttcccatg actcaggccc tttctcgagc
4561 cctctggact cacaatcaga ttaacctcct accaattcta aagaccagat gggagctaca
4621 ccattcaccc ccacttgctg tcatttcaga gggcggagaa acacccaagg gctctgataa
4681 actctttttg tacaagctcc ccgggcaaaa caatcgtcgg tggctaggac cactcccggc
4741 cctagtcgaa gcctcgggag gcgctctcct ggctaccaac ccccccgtgt gggttccctg
4801 gcgtttgctg aaggccttca aatgcctaaa gaacgacggt cccgaagacg ccccgaaccg
4861 atcatcagat gggtaagtct cactctcact ctcctcgctc tctgtcagcc catccagact
4921 tggagatgct ccctgtccct aggaaatcaa caatggatga cagcatataa ccaagaggca
4981 aaattttcca tctccattga ccaaatacta gaggctcata atcagtcacc tttctgtgcc
5041 aagtctccca gatacacctt ggactctgta aatggctatc ctaagatcta ctggcccccc
5101 ccacaagggc ggcgccggtt tggagccagg gccatggtca catatgattg cgagccccga
5161 tgcccttatg tgggggcaga tcgcttcgac tgcccccact gggacaatgc ctcccaggcc
5221 gatcagggat ccttttatgt caatcatcag attttattcc tgcatctcaa acaatgtcat
5281 ggaattttca ctctaacctg ggagatatgg ggatatgatc ccctgatcac cttttcttta
5341 cataagatcc ctgatccccc tcaacccgac tttccccagt tgaacagtga ctgggttccc
5401 tctgtcagat catgggccct gcttttaaat caaacagcac gggccttccc agactgtgct
5461 atatgttggg aaccttcccc tccctgggct cccgaaatat tagtatataa caaaaccatc
5521 tccagctctg gacccggcct cgccctcccg gacgcccaaa tcttctgggt caacacgtcc
5581 tcgtttaaca ccacccaagg atggcaccac ccttcccaga ggttgttgtt caatgtttct
5641 caaggcaacg ccttgttatt acctcctatc tccctggtta atctctctac ggcttcctcc
5701 gcccctccta cccgggtcag gcgtagtcct gtcgcggccc tgaccttagg tctagccctg
5761 tcagtggggc tcactggaat taaagtagcc gtgtctgccc ttagccatca gagactcacc
5821 tccctgatcc acgttctgga acaagatcag caacgcttga ttacagcaat taaccagacc
5881 cactataatt tgcttaatgt ggcctctgtg gtcgcccaga accgacgggg gcttgattgg
5941 ttgtacatcc ggctgggttt tcaaagccta tgtcccacaa tcaatgaacc ttgctgtttc
6001 ctgcgcattc aaaacgactc catcatccgc ctcggtgatc tccagcctct ctcgcaaaga
6061 gtctctacag actggcagtg gccctggaat tgggatctgg gactcactgc ctgggtgcga
6121 gaaaccattc attccgttct aagcctgttc ctattagccc ttcttttgct cttcttggcc
6181 ccctgcctga taaaatgctt gacctctcgc ctttcaaagc tcctccggca ggctccccac
6241 ttccctgaga tctccttccc ccctaaaccc gattctgatt atcaggcctt gctaccgtca
6301 gcaccagaga tctactctca cctctccccc accaaacccg attacatcaa ccttcgaccc
6361 tgcccttgac acccccgtgt ttcacgcacc ctcaggctgt ggtggggcac tggcttagtg
6421 gaatagtcag tgtaccatca caagcctctt cttgctgcca gcaccgagtt cgaacacagc
6481 cctaccctga gcctctctga gtacatgact gagtgtagcg cagagaggtt gtcgcttctg
6541 cgtgtcactc agtcattttt tatagccgat tggggttcgc gccctcccat tgcctgtgac
6601 acggttaaga cctctctcac ttctgcttca ccatccccct gccagcgttg gtctagtgga
6661 aagaactaac gctgacgggg gcgatttctt gcagctgtgc taagcgagag gctctggtgc
6721 tggggataag atgcggcccc tagcaccacc gtctctgcgc cttttgggtt cgaatcttcc
6781 ccatgcagct tccgcttttt acgccctgtt gcacaccctt tctagagata cctgaaaatc
6841 tcagctcgca ccccaaggaa ggttgtggct cagaggttaa aatagctcga gccgcaacct
6901 ccctttcttt ttattccacc ctcgcaaggc cccgggttct gagcccccta acggaggttt
6961 aaaatttcct ctactagagg atgctcggga ggaagtcacg tcaatatctc ttcgaaaagg
7021 tcctgatgaa catcttccca tgtaacaagc cccaacagag acattccagc cacatccagc
7081 agcattcggg ccgccttctc taacagtgcc cataaagtct cttccgtttc cacaacgcct
7141 gcctctgcat cttctatttc cacctcggca ccgactcccc cgccgagccc ctcgagctct
7201 tcgggatcca ttacctgata acgacaaaat tatttcttgt cttttaagca agtgttgttg
7261 gttgggggcc ccactctctg catgcctgcc cggccctggt tttgtccaat gatgtcacca
7321 tcgatgcctg gtgccccctc tgcgggcccc atgaacgact ccaattcgag aggatcgaca
7381 ccacgctcac ctgcgagacc caccgtatca cctggaccgc cgatggacga cctttcggcc
7441 tcaatggaac gttgttccct cgactgcatg tctccagaga cccgccccca agggccccga
7501 cgactctgga tcaactgccc ccttccggcc gttcgcgctc agcccggccc ggtttcactt
7561 tcccccttcg agcagtcccc cttccagccc taccaatgcc aattgccctc ggcctctagc
7621 gatggttccc ccatcatcgg gcacggcctt cttccctgga acaacttagt aacgcacccc
7681 gtcctcggaa aagtccttat attaaatcag atggcaaatt tctccttact cccctccttc
7741 gataccctca ttgtagaccc cctccggctg tccgtctttg ccccggacca ctaggggagc
7801 catacgttat ctctccaccc ttttgacgct atgcccagct acttgtatcc tacccctaga
7861 cgagcccttc tctcctaatg tccccatatg ccgctttccc cgggactcca atgaaccccc
7921 cctttcagaa ttc
//