GenBank-Updates@genbank.bio.net (02/23/91)
LOCUS BLVGPE 7933 bp ss-RNA VRL 23-FEB-1991 DEFINITION Bovine leukemia virus (proviral) gag, pol and env genes. ACCESSION D00647 KEYWORDS env gene; gag gene; glycoprotein; pol gene; provirus. SOURCE Bovine leukemia virus (Australian isolate) proviral DNA, clone pBLV-A1. ORGANISM Bovine leukemia virus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Retroviridae; Oncovirinae; Type C oncovirus group; Mammalian type C oncoviruses. REFERENCE 1 (bases 1 to 7933) AUTHORS Coulston,J., Naif,H., Brandon,R., Kumar,S., Khan,S., Daniel,R.C. and Lavin,M.F. TITLE Molecular cloning and sequencing of an Australian isolate of proviral leukaemia virus DNA: Comparison with other isolates JOURNAL J. Gen. Virol. 71, 1737-1746 (1990) STANDARD full staff_review COMMENT These data kindly submitted in computer readable form by: Martin F. Lavin Queensland Institute of Medical Research Bramston Terrace Herston Qld 4006 Australia Phone: 07-253-6214 Fax: 07-252-5499 Telex: QIMRBR AA145420 FEATURES Location/Qualifiers CDS <2318..4876 /note="pol protein" LTR 1..531 /note="5' LTR" CDS 629..1807 /note="gag protein" CDS 4822..6369 /note="precursor of env protein" sig_peptide 4822..4920 /note="signal peptide of env protein" mat_peptide 4921..5724 /note="gp51 surface glycoprotein (env)" mat_peptide 5725..6366 /note="gp30 transmembrane protein (env)" BASE COUNT 1759 a 2632 c 1673 g 1869 t ORIGIN 1 tgtatgaaag atcatgccga cctaggagcc gccaccgccc cgcgcgaacc agacagagac 61 gtcagctgcc agaaaagctg gtgacggcag ctggtggcta gaatccccgc acctccccaa 121 cttccccttt cccgagaaat ccacaccctg agctgctgac ctcacctgct gataaattaa 181 taaaatgccg gccctgtcga gttagcggca ccagaagcgc tcttctcctg agaccctcgt 241 gctcagctct cggtcctgag ctctcttgct cccgagacct tctggtcggc tatccggcag 301 gcggcaggta aggcaagcac ggtttggagg gtggttctcg gctgagacca ccgcgagctc 361 tatctccggt ccttgaccgt ctccacgtgg actctctctc ttgcctcctg accccgcgct 421 ccaagggcgt ctggcttgca cccgcgttcg tttcctgtct tactttctgt ttctcgcggc 481 ccgcgctctc tccttcggcg ccctctagcg gccaggggag accggcaaac aattgggggc 541 tcgtccggga ttgatcaccc cggaacccta aaacttctct ggacccaccc cctcggcggc 601 gtcttgggtc tttccttcaa atcatatcat gggaaactcc ccctcctata acccccccgc 661 tggcatctcc ccctcagact ggctcaacct cctgcaaagc gcgcaaaggc tcaatccacg 721 accctccccc agcgatttta ccgatttaaa aaattacatc cattggtttc ataagaccca 781 gaaaaaacca tggactttca cttctggtgg ccccgcctca tgcccacccg ggaaattcgg 841 ccgagttccc cttgtcttgg ccaccctaaa cgaagtgctc tcaaacgatg agggcgcccc 901 gggtgcatcg gccccagaag aacaaccccc cccttatgac cctcccgctg ttttaccaat 961 catatctgaa gggaatcgca accgccaccg cgcttgggca ctccgagaat tacaagatat 1021 taaaaaggag attgaaaata aggcaccggg gtcgcaagta tggatacaaa cgctacgact 1081 tgcaatcctg caggccgacc ctacccctgc tgacctagaa cagctttgcc aatatattgc 1141 ttccccggtc gaccaaacgg cccacatgac cagcctaacg gcggcaatag ccgctgaagc 1201 ggcaataccc tccagggttt taatccccaa aatgggaacc ctgacccaac aatcagctca 1261 gcccaacgcc ggagatctta ggagtcaata tcaaaacctc tggcttcagg ctggaagaat 1321 ctccctactc gtccttcagg tacaaccctg gtccaccatc gtccagggcc ccgccgagag 1381 ctatgtagag tttgtcaacc ggttacaaat ttcattagct gacaaccttc ccgacggagt 1441 ccctaaagaa cccattattg actcccttag ttatgcaaat gccaacaaag aatgccaaca 1501 aattttgcag gggcggggct tagtggccgc cccggtggga caaaaactgc aggcttgtgc 1561 acactgggcc cccaagacta aacagcctgc aatcctcgtc cacaccccag ggcccaagat 1621 gcccgggcct cggcaaccgg cccccaaaag gccccccccg ggaccatgct atcgatgcct 1681 caaagaaggc cattgggccc gggactgtcc caccaaaacc accggccccc ctccgggacc 1741 ttgtcccata tgtaaagatc cttcccattg gaaacgagac tgtccaaccc tcaaatcaaa 1801 aaactaatag aggggggacc tagcgccccc caaatcataa cacctataac agattctctc 1861 agtgaggccg aattagaatg cttactttct attcctctgg ctcgcagccg tccctccgtg 1921 gctgtatacc tgtctggccc ctggctgcag ccctctcaaa atcaagccct catgctcgtg 1981 gacaccgggg ctgaaaatac ggtcctccca caaaattggc tggttcgaga ttacccacgg 2041 acccccgccg cggtactcgg agcgggagga atctcccgga acagatacaa ttggctacaa 2101 ggccctctga ccctggctct aaaaccagag ggtcccttta tcaccatccc aaaaatttta 2161 gttgacacct tcgataaatg gcaaatttta ggacgggacg tctctcccgc ctacaggctt 2221 ctatctccat acctgaggaa gtacaccccc ctgtggtagg cgtcttagat gcccccccga 2281 gccacattgg attagaacat ttgccccccc cacctgaggt acctcaattc cctttaaact 2341 agaacgcctc caggcccttc aagacctggt ccatcgctct ctggaggcag gttatatctc 2401 cccctgggac gggccaggca ataatccagt cttcccggta cggaaaccaa atggtgcctg 2461 gaggtttgtg catgatctac gagttacaaa tgctcttaca aagcccatcc cggcactctc 2521 ccccggaccg ccagacctta ccgctatccc cacacacctt ccacatatca tttgtttaga 2581 tctcaaagat gccttcttcc agattccagt cgaagaccgc ttccgctcct actttgcttt 2641 taccctccct acccccgggg gacttcaacc tcatagacgc ttcgcctggc gggtcctacc 2701 tcaaggcttc attaacagcc cagctctttt cgaacgggca cttcaggaac cccttcgcca 2761 agtttccgcc gccttttccc agtctcttct ggtgtcctat atggacgata tcctttacgt 2821 ttcgcctaca gaggaacaac ggttacaatg ttatcaaact atggctgccc acctccggga 2881 cctagggttt caggtggcgt ctgaaaagac tcgccagacg ccttcgcctg tccctttctt 2941 gggacaaatg gtccatgagc ggatggtcac ctaccagtcc ctacctacct tgcagatctc 3001 atccccaatt tctcttcacc aattacagac ggtcttggga gacctccaat gggtctctag 3061 gggcacaccc actacccgcc ggcccctgca acttctatac tcttctctta aaggcatcga 3121 tgacccaagg gccatcatcc acctttcccc ggaacagcag cagggcattg cagagcttcg 3181 acaagccctg tcccataacg caagatccag atataacgag caggaacccc tgctggccta 3241 cgtacacctc acccgggcgg ggtccaccct ggtactcttc cagaagggcg ctcaatttcc 3301 cctggcctac tttcagaccc ccttgactga caaccaagcc tcaccttggg gcctccttct 3361 cctgctggga tgccaatatc tgcaggctca ggccttaagc tcctatgcca agaccatact 3421 caaatactat cacaatcttc ctaaaacctc tctagacaat tggatccaat catctgagga 3481 ccctcgagtt caggagttgt tgcaattgtg gccccagatt tcctctcagg gaatacagcc 3541 cccgggcccc tggaagacct tagtcaccag ggcagaggtt tttttgacgc cccagttctc 3601 ccctgaaccg atccctgcgg ccctttgcct ctttagtgac ggggctgcaa gacgaggagc 3661 atattgctta tggaaagacc accttttgga ctttcaggcc gttccagctc cagagtccgc 3721 ccaaaaggga gaactagcag gtcttttggc gggcttagca gccgccccgc ctgaaccttt 3781 aaatatatgg gtagattcca aatacctgta ctccttgctc agaaccctag ttctaggagc 3841 ttggcttcaa cctgaccccg taccctctta tgccctccta tataaaagcc tcctccgaca 3901 tccagcaatc tttgttggtc atgttcggag ccactcttca gcatcccacc ctattgcttc 3961 cctgaacaat tatgtagatc aactgcttcc cttagaaact ccagagcaat ggcataagct 4021 cacccactgc aactctcggg ccttgtctcg atggccgaac ccacgtattt ctgcctggga 4081 tccccgttcc cccgctacgc tgtgtgaaac ctgtcaaagg ctcaacccaa ctggaggcgg 4141 aaagatgcgg actattcaga gagggtgggc cccaaatcat atctggcagg ccgatataac 4201 tcattataaa tacaaacagt tcacctacgc tttgcacgtg tttgtagata cttactctgg 4261 agctactcat gcctcagcaa agcgagggct caccactcaa acgaccattg agggccttct 4321 tgaggccata gtgcatctag gtcgtccaaa aaagctaaac accgaccaag gtgctaacta 4381 cacctccaaa acctttgtca ggttttgcca gcagttcgga atttcccttt ctcatcatgt 4441 tccctacaac cccacaagtt cagggttagt ggaacggaca aatggactgc tcaaacttct 4501 tttgtctaaa tatcacttag acgaacccca ccttcccatg actcaggccc tttctcgagc 4561 cctctggact cacaatcaga ttaacctcct accaattcta aagaccagat gggagctaca 4621 ccattcaccc ccacttgctg tcatttcaga gggcggagaa acacccaagg gctctgataa 4681 actctttttg tacaagctcc ccgggcaaaa caatcgtcgg tggctaggac cactcccggc 4741 cctagtcgaa gcctcgggag gcgctctcct ggctaccaac ccccccgtgt gggttccctg 4801 gcgtttgctg aaggccttca aatgcctaaa gaacgacggt cccgaagacg ccccgaaccg 4861 atcatcagat gggtaagtct cactctcact ctcctcgctc tctgtcagcc catccagact 4921 tggagatgct ccctgtccct aggaaatcaa caatggatga cagcatataa ccaagaggca 4981 aaattttcca tctccattga ccaaatacta gaggctcata atcagtcacc tttctgtgcc 5041 aagtctccca gatacacctt ggactctgta aatggctatc ctaagatcta ctggcccccc 5101 ccacaagggc ggcgccggtt tggagccagg gccatggtca catatgattg cgagccccga 5161 tgcccttatg tgggggcaga tcgcttcgac tgcccccact gggacaatgc ctcccaggcc 5221 gatcagggat ccttttatgt caatcatcag attttattcc tgcatctcaa acaatgtcat 5281 ggaattttca ctctaacctg ggagatatgg ggatatgatc ccctgatcac cttttcttta 5341 cataagatcc ctgatccccc tcaacccgac tttccccagt tgaacagtga ctgggttccc 5401 tctgtcagat catgggccct gcttttaaat caaacagcac gggccttccc agactgtgct 5461 atatgttggg aaccttcccc tccctgggct cccgaaatat tagtatataa caaaaccatc 5521 tccagctctg gacccggcct cgccctcccg gacgcccaaa tcttctgggt caacacgtcc 5581 tcgtttaaca ccacccaagg atggcaccac ccttcccaga ggttgttgtt caatgtttct 5641 caaggcaacg ccttgttatt acctcctatc tccctggtta atctctctac ggcttcctcc 5701 gcccctccta cccgggtcag gcgtagtcct gtcgcggccc tgaccttagg tctagccctg 5761 tcagtggggc tcactggaat taaagtagcc gtgtctgccc ttagccatca gagactcacc 5821 tccctgatcc acgttctgga acaagatcag caacgcttga ttacagcaat taaccagacc 5881 cactataatt tgcttaatgt ggcctctgtg gtcgcccaga accgacgggg gcttgattgg 5941 ttgtacatcc ggctgggttt tcaaagccta tgtcccacaa tcaatgaacc ttgctgtttc 6001 ctgcgcattc aaaacgactc catcatccgc ctcggtgatc tccagcctct ctcgcaaaga 6061 gtctctacag actggcagtg gccctggaat tgggatctgg gactcactgc ctgggtgcga 6121 gaaaccattc attccgttct aagcctgttc ctattagccc ttcttttgct cttcttggcc 6181 ccctgcctga taaaatgctt gacctctcgc ctttcaaagc tcctccggca ggctccccac 6241 ttccctgaga tctccttccc ccctaaaccc gattctgatt atcaggcctt gctaccgtca 6301 gcaccagaga tctactctca cctctccccc accaaacccg attacatcaa ccttcgaccc 6361 tgcccttgac acccccgtgt ttcacgcacc ctcaggctgt ggtggggcac tggcttagtg 6421 gaatagtcag tgtaccatca caagcctctt cttgctgcca gcaccgagtt cgaacacagc 6481 cctaccctga gcctctctga gtacatgact gagtgtagcg cagagaggtt gtcgcttctg 6541 cgtgtcactc agtcattttt tatagccgat tggggttcgc gccctcccat tgcctgtgac 6601 acggttaaga cctctctcac ttctgcttca ccatccccct gccagcgttg gtctagtgga 6661 aagaactaac gctgacgggg gcgatttctt gcagctgtgc taagcgagag gctctggtgc 6721 tggggataag atgcggcccc tagcaccacc gtctctgcgc cttttgggtt cgaatcttcc 6781 ccatgcagct tccgcttttt acgccctgtt gcacaccctt tctagagata cctgaaaatc 6841 tcagctcgca ccccaaggaa ggttgtggct cagaggttaa aatagctcga gccgcaacct 6901 ccctttcttt ttattccacc ctcgcaaggc cccgggttct gagcccccta acggaggttt 6961 aaaatttcct ctactagagg atgctcggga ggaagtcacg tcaatatctc ttcgaaaagg 7021 tcctgatgaa catcttccca tgtaacaagc cccaacagag acattccagc cacatccagc 7081 agcattcggg ccgccttctc taacagtgcc cataaagtct cttccgtttc cacaacgcct 7141 gcctctgcat cttctatttc cacctcggca ccgactcccc cgccgagccc ctcgagctct 7201 tcgggatcca ttacctgata acgacaaaat tatttcttgt cttttaagca agtgttgttg 7261 gttgggggcc ccactctctg catgcctgcc cggccctggt tttgtccaat gatgtcacca 7321 tcgatgcctg gtgccccctc tgcgggcccc atgaacgact ccaattcgag aggatcgaca 7381 ccacgctcac ctgcgagacc caccgtatca cctggaccgc cgatggacga cctttcggcc 7441 tcaatggaac gttgttccct cgactgcatg tctccagaga cccgccccca agggccccga 7501 cgactctgga tcaactgccc ccttccggcc gttcgcgctc agcccggccc ggtttcactt 7561 tcccccttcg agcagtcccc cttccagccc taccaatgcc aattgccctc ggcctctagc 7621 gatggttccc ccatcatcgg gcacggcctt cttccctgga acaacttagt aacgcacccc 7681 gtcctcggaa aagtccttat attaaatcag atggcaaatt tctccttact cccctccttc 7741 gataccctca ttgtagaccc cctccggctg tccgtctttg ccccggacca ctaggggagc 7801 catacgttat ctctccaccc ttttgacgct atgcccagct acttgtatcc tacccctaga 7861 cgagcccttc tctcctaatg tccccatatg ccgctttccc cgggactcca atgaaccccc 7921 cctttcagaa ttc //