GenBank-Updates@genbank.bio.net (02/23/91)
LOCUS HSSLEFT 272 bp ds-DNA VRL 23-FEB-1991
DEFINITION Pseudorabies virus genome, the junction of the unique short and
short terminal repeat regions.
ACCESSION D00633
KEYWORDS short terminal repeat region; short unique region.
SOURCE Pseudorabies virus (strain Ka) DNA, clone pPRVB12.
ORGANISM Pseudorabies virus
Viridae; ds-DNA enveloped viruses; Herpesviridae;
Alphaherpesvirinae.
REFERENCE 1 (bases 1 to 272)
AUTHORS Zhang,G. and Leader,D.P.
TITLE The structure of the pseudorabies virus genome at the end of
inverted repeat sequences proximal to the junction with the short
unique region
JOURNAL J. Gen. Virol. (1990) In press
STANDARD full staff_review
COMMENT These data kindly submitted in computer readable form by:
David P. Leader
Department of Biochemistry
University of Glasgow
G12 8QQ, Glasgow
Scotland
U.K.
Phone: +41 3398855 x5265 or 6448
Email: GBCA26@VMS3.GLA.AC.UK (Janet)
Fax: +41 3304620
Telex: 777070
FEATURES Location/Qualifiers
misc_signal 220..225
/note="pot. polyadenylation signal"
misc_feature 251..251
/note="end of unique short region"
misc_feature 252..252
/note="start of terminal short repeat region"
BASE COUNT 48 a 113 c 77 g 34 t
ORIGIN ca. 89 genome % units, 1 bp upstream of BamHI site.
1 ggatcccggc cacccgcgcc atgttcgcgc gggtccacaa ccgctcctgg cgccacgccg
61 gcgagtggac ggaggccctg catgcccaga tcgtgacccg gggcgacgtg cgccggcgcc
121 ggggcgggcg cggcaacgga cgcgagcgcg ccccgcgatg taccatctcc tagacggcag
181 gatctctccg catcccccac accccccaaa aaaacaaaca ataaacgctc tcgctctggc
241 acccgatgac acgcctccgt cctctctctc cc
//