GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS MUSAPE 4856 bp ds-DNA ROD 05-MAR-1991 DEFINITION Mouse apolipoprotein E gene. ACCESSION D00466 KEYWORDS apolipoprotein E. SOURCE Mus musculus (BALB/c) genomic DNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (sites) AUTHORS Rajavashisth,T.B., Kaptein,J.S., Reue,K.L. and Lusis,A.J. TITLE Evolution of apolipoprotein E: Mouse sequence and evidence for an 11-nucleotide ancestral unit JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 8085-8089 (1985) STANDARD full staff_review REFERENCE 2 (bases 1 to 4856) AUTHORS Horiuchi,K., Tajima,S., Menju,M. and Yamamoto,A. TITLE Structure and expression of mouse apolipoprotein E gene JOURNAL J. Biochem. 106, 98-103 (1989) STANDARD full staff_entry COMMENT [Proc. Natl. Acad. Sci. U.S.A. 82, 8085-8089 (1985)] sites. Submitted in computer readable form by S. Tajima on 12-Sep-1989. FEATURES Location/Qualifiers CDS join(1821..1863,2403..2571,2949..3672) /note="apolipoprotein" misc_signal 926..931 /note="put. GC box" misc_signal 946..951 /note="put. GC box" misc_signal 965..971 /note="put. TATA box" precursor_RNA 997..3781 /note="apolipoprotein mRNA and introns" intron 1039..1797 /note="apolipoprotein intron" exon 1821..1863 /note="apolipoprotein, exon 2" exon 1821..1863 /note="apolipoprotein, exon 2" exon 1821..1863 /note="apolipoprotein, exon 2" exon 1821..1863 /note="apolipoprotein, exon 2" intron 1864..2402 /note="apolipoprotein intron" repeat_region 2162..2197 /note="CA repeat" exon 2403..2571 /note="apolipoprotein, exon 3" exon 2403..2571 /note="apolipoprotein, exon 3" exon 2403..2571 /note="apolipoprotein, exon 3" exon 2403..2571 /note="apolipoprotein, exon 3" variation 2518..2518 /note="g in [J. Biochem. 106, 98-103 (1989)]; t in [Proc. Natl. Acad. Sci. U.S.A. 82, 8085-8089 (1985)]" intron 2572..2948 /note="apolipoprotein intron" exon 2949..3672 /note="apolipoprotein, exon 4" exon 2949..3672 /note="apolipoprotein, exon 4" exon 2949..3672 /note="apolipoprotein, exon 4" exon 2949..3672 /note="apolipoprotein, exon 4" variation 3225..3225 /note="g in [J. Biochem. 106, 98-103 (1989)]; t in [Proc. Natl. Acad. Sci. U.S.A. 82, 8085-8089 (1985)]" misc_signal 3762..3767 /note="poly(A) signal" repeat_region 4167..4376 /note="rodent repeat(B2)" BASE COUNT 1108 a 1291 c 1267 g 1190 t ORIGIN 5' end of Sau3AI site. 1 gatcttcctg cctcagcttt gcatatggct agcactatag acccatgttc cagtgaatga 61 cttatggctt gtcttttttt tttttttttt ttttttttat gtgcattagt gttttgcctg 121 catgtatgcc ttcgtgaggg tagcagatct tggtgttaca gttgtgagct gctgtgtggg 181 tgctgcgatt ttgaacctag gtcctgtgaa atcgagtcag tgctcctaac ctctgagtca 241 tctctccagc tcctgctctt ctgcttttat gaggaaaaag aaaagagaag tggcttgaga 301 gtggaaaatg cacatgcagg ggtgcacacc tgcagtcccc agcatgctac agcagaggca 361 gaaggacctt tgtgggttag agggcagcct gagaatctta tctcaaaaca actttttaaa 421 atgtgctctg taggggtagc tcttccctcc caaggtgaca cattgcaatc gccagaaaca 481 gatcaggagc atcaacgctt ggtttcccag ggcttggctt aatgtatggc ttcaaaccca 541 tcgggagcca ccactgaaca gctcctgaag gaactggagc acgtcccagc cttggaatgg 601 aaagagttca cctgtggtgg aggaatcaac aacgagggat cccagaacaa cgatcttcac 661 cccagaagct gagcctctta gcccccaccc acccatttcc agtttaggct gaccagctct 721 tttctttaca atgcaccaga cccgcggaaa gggaaggagc ggttctcagt gcccagtacc 781 aaggcctgga ttattcaatg aggtgtccgc tccctttgtt ggcggggagg ggagcggggg 841 tcacaaggca tccaaactcc acctctttcc tctgccctgc tgtgaagggg gagagaacaa 901 cccgcctcgt gacagcgtgc acagcccgcc ctagccctga ggagggggcg gacaggggga 961 gtcctataat tggaccggtc tgggatccga tcccctgctc agaccctgga ggctaaggac 1021 ttgtttcgga aggagctggt aagacaagct gggctgggga ttcacccagg gaccttggta 1081 ggatgtgggc tgggaacctt gagatccccc ggagtccagg aaacaggcac aagaattgga 1141 aaagcaggca gcacgataga agtcttgggg gacaaactaa ggactcgagg taactagcct 1201 ttgccagagt cagagcaggt ggaggggtta cctccaggaa ggagtacggg actgtcggtg 1261 ccacggcgta ccggctcaac taggaaccag tcctatggcg aaaaaactcg ggatgagcct 1321 taggctgctt tttatataaa tacctactga tttccatcac agtccccaag taacccggac 1381 tggtttcaaa ctgtggctcc tcatggctga gctccctaag ttctgtagtt gtgggagggt 1441 accacttcgc agggatggag gacgattaaa aatcgtgtta aattaacaca aaatggaaag 1501 caggacttag ccgggaagaa agaggaatgt aagctggacc acccgctggc cctctgtgaa 1561 gtggaatttg aaccctagga gagggagctg gaatttttgg cagcggatcc acccggggtg 1621 ccgagatagc gaactcggca aggggaggta aacagacctt tgggaagagc gggtgctctg 1681 ttttggagat gtttgtgatg gctcacagat ctgagaaggg aagatggggt tctctgggtg 1741 gccggagtcc ctccaccccc gccccctggt gttcaaagac aatttttccc tccgcagact 1801 ggccaatcac aattgcgaag atgaaggctc tgtgggccgt gctgttggtc acattgctga 1861 caggtatgga gcaaggactt gctgtggtgc cgctttttct gctcctctgt ggactctatt 1921 ctagccctag atctcttctg ctggtgggtt gaggctgagg cggttctgag acctctctga 1981 gattcaatag ccctgagcag ctgttttata tactctttag gccttgattt cccctaacta 2041 taagaggatt gatggcttag tgggtaaagg tgcttatcat aaagcttgaa gacttaactc 2101 tgagaccaac atagtggaag gagagagcca attccctcta gaactctgac ctccaagggt 2161 acacacacac acacacacac acacacacac acacacaata aaaagttgat ttcttagttg 2221 ctcttaaaag tgggtataca ttttctaatt ccacacctgc ctagtctcgg ctctgaacta 2281 cataggatac aagacagtgc atgcttgtag tatctaaaca gactccacag cctccagacc 2341 cacttcaaag agacccaaaa agactgtagg tcctgaccca gccttaaact tactctacac 2401 aggatgccta gccgagggag agccggaggt gacagatcag ctcgagtggc aaagcaacca 2461 accctgggag caggccctga accgcttctg ggattacctg cgctgggtgc agacgctgtc 2521 tgaccaggtc caggaagagc tgcagagctc ccaagtcaca caagaactga cgtgagtgtc 2581 cagctctttc accctcggca ggcaccagct gatccagggt tgcctcctat ctgggtcccc 2641 agccccttct tgtttccttt ctcaattagt gtgtagccca ggttggcctt gaatcctcct 2701 gccttcttta gccttctgga tgctgggagg aacagacatt tattacttgc ttggtcgatt 2761 ggcttttggc ttcttgagac aggatcccat tctgtaactc aagctggctt cgaaggctct 2821 gcaattctta tgccgcagct tctcaacttc tgggaacaca agcgagtacc atcacctctt 2881 gcctctgtgg tttctggccc cttctgtcct gccttcatct ccttcctgtg tttcctctgg 2941 gcctgcaggg cactgatgga ggacactatg acggaagtaa aggcttacaa aaaggagctg 3001 gaggaacagc tgggtccagt ggcggaggag acacgggcca ggctgggcaa agaggtgcag 3061 gcggcacagg cccgactcgg agccgacatg gaggatctac gcaaccgact cgggcagtac 3121 cgcaacgagg tgcacaccat gctgggccag agcacagagg agatacgggc gcggctctcc 3181 acacacctgc gcaagatgcg caagcgcttg atgcgggatg ccgaggatct gcagaagcgc 3241 ctagctgtgt acaaggcagg ggcacgcgag ggcgccgagc gcggtgtgag tgccatccgt 3301 gagcgcctgg ggcctctggt ggagcaaggt cgccagcgca ctgccaacct aggcgctggg 3361 gccgcccagc ctctgcgcga tcgcgcccag gcttttggtg accgcatccg agggcggctg 3421 gaggaagtgg gcaaccaggc ccgtgaccgc ctagaggagg tgcgtgagca catggaggag 3481 gtgcgctcca agatggagga acagacccag caaatacgcc tgcaggcgga gatcttccag 3541 gcccgcctca agggctggtt cgagccaata gtggaagaca tgcatcgcca gtgggcaaac 3601 ctgatggaga agatacaggc ctctgtggct accaacccca tcatcacccc agtggcccag 3661 gagaatcaat gagtatcctt ctcctgtcct gcaacaacat ccatatccag ccaggtggcc 3721 ctgtctcaag cacctctctg gccctctggt ggcccttgct taataaagat tctccgagca 3781 cattctgagt ctctgtgagt gattccaatc agcttcagcc tcagtttatt gttttttgcc 3841 ttacctagca cacattccat ggccctgtca ctatctgtag agggaggtgg ttttgcagca 3901 atagaaatga agcctaggac ctagcaacat aaaagaacaa gtgatctacc actgagccac 3961 gcccacagcc tcactggggg attctaggca ggggctctac cactgagcca cccgcagccc 4021 tcactgggga atcatatcta ccactgagtc acgcccctcc agcccctcac tacggaattc 4081 tagtcagtag ctctaccact gagccacacc cacagcctct ggggctcttc accgccccct 4141 acccctggat tctaggcatg ggcatcattt tatttattta tttatttaag atttgtttat 4201 cttatgtata aggtacactg cagctgtctt caggcgtcag gtcccattac agatggttgt 4261 gagccaccat gtggttgctg ggaattgaac tcaggactta tagaagagta gtcagtgctc 4321 ttaactgctg agccatctct ccagcaccca gtacaggctc ttctatttag ctatatccac 4381 ccttcttttt agtctgaaat aggatctcaa ctgatttcct tgcactcctc tagcctagtt 4441 ggtcttgaat attgaatctt gtttcaatca atctctacag gaactgagaa aggcatgtac 4501 acttcatgtg ggtcagttgg gctacttttc ccaacttccc aagcacccac tcgacagcta 4561 tgccttgaat caatcaacat gtaagagacc agggtcgcca ggacggagat ttacttttct 4621 ggttgtctta tctctcctcc tccgctctag tcttatctga ccaccctctc cttgccttgt 4681 ctctcctctt tttcccttct aggcttcctt ttctggcttc ctgttttcct gatcctctgt 4741 tatctcaccc tcccgcggtt tcttttgctc tgggcctttg gttggcggtt tctacggttt 4801 ctacgtggct tttggaacct cagcctttct cccttgctct gaagttagct ggatcc //