GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS BRVN 730 bp ss-RNA VRL 05-MAR-1991 DEFINITION Berne virus, nucleocapsid protein mRNA, complete cds. ACCESSION D00563 KEYWORDS nucleocapsid protein. SOURCE Berne virus (strain P138/72), cDNA to mRNA from infected embryonic mule skin cells, clone 27 and 31. ORGANISM Berne virus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Toroviridae. REFERENCE 1 (bases 1 to 730) AUTHORS Snijder,E.J., Den Boon,J.A., Spaan,W.J., Verjans,G.M. and Horzinek,M.C. TITLE Identification and primary structure of the gene encoding the Berne virus nucleocapsid protein JOURNAL J. Gen. Virol. 70, 3363-3370 (1989) STANDARD full staff_entry COMMENT Submitted in computer readable form by Snijder,E.J. on 23-MAR-1990. FEATURES Location/Qualifiers misc_signal 31..38 /note="core promoter sequence (putative)" CDS 51..533 /note="nucleocapsid protein" CDS 73..339 /note="9.8K protein" misc_signal 531..730 /note="3' untranslated sequence present in all Berne virus mRNAs" misc_feature 730..730 /note="start of the poly(A) tail" BASE COUNT 218 a 147 c 144 g 221 t ORIGIN 53 bp upstream of EcoRI site. 1 agtaattaag taggttagtg agagacacta tctttagaga aagagccaag atgaattcta 61 tgcttaatcc aaatgctgtg ccatttcaac catcacctca ggttgttgca ttacccatgc 121 aatacccatc tggtttttct tctggttatc gtcgacagcg tgacccagct tttcgtccta 181 tgtttaggcg acaaaataat ggcaatcaga atcgcagccg tcaaaatcgg cagcgtcttc 241 aaaataataa tcggggcaat aaccgaaatc gtaatcagtt taataggcgc cagaatcagc 301 cgtctcaaag tatgtcattt gaacagcaat tgctgttgat ggcaaatgaa actgcttatg 361 ctgcaactta tccatcagac atgcagaata ttgcccccac taaattggta aagattgcca 421 aaagagctgc aatgcaaatt gtttccggtc atgctaccgt agagatatct aatggcactg 481 aagactctaa tcaacgagtc gccaccttta ctattaaggt ggttatgaat taaaaccttt 541 tcagcaacct taaggttggt ctgttattta attgtttagt tttatcaaca tggcataact 601 tgcctctggc tccactgtgt gtaaccatct agattttaat ggttttgcta gatataatgg 661 ttgagtgtct ccatgtaaga tgttatgtta gttagaatta ggcctacccc agatgtagta 721 aaaagcagct //