GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS BRVN 730 bp ss-RNA VRL 05-MAR-1991
DEFINITION Berne virus, nucleocapsid protein mRNA, complete cds.
ACCESSION D00563
KEYWORDS nucleocapsid protein.
SOURCE Berne virus (strain P138/72), cDNA to mRNA from infected embryonic
mule skin cells, clone 27 and 31.
ORGANISM Berne virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Toroviridae.
REFERENCE 1 (bases 1 to 730)
AUTHORS Snijder,E.J., Den Boon,J.A., Spaan,W.J., Verjans,G.M. and
Horzinek,M.C.
TITLE Identification and primary structure of the gene encoding the Berne
virus nucleocapsid protein
JOURNAL J. Gen. Virol. 70, 3363-3370 (1989)
STANDARD full staff_entry
COMMENT Submitted in computer readable form by Snijder,E.J. on 23-MAR-1990.
FEATURES Location/Qualifiers
misc_signal 31..38
/note="core promoter sequence (putative)"
CDS 51..533
/note="nucleocapsid protein"
CDS 73..339
/note="9.8K protein"
misc_signal 531..730
/note="3' untranslated sequence present in all Berne virus
mRNAs"
misc_feature 730..730
/note="start of the poly(A) tail"
BASE COUNT 218 a 147 c 144 g 221 t
ORIGIN 53 bp upstream of EcoRI site.
1 agtaattaag taggttagtg agagacacta tctttagaga aagagccaag atgaattcta
61 tgcttaatcc aaatgctgtg ccatttcaac catcacctca ggttgttgca ttacccatgc
121 aatacccatc tggtttttct tctggttatc gtcgacagcg tgacccagct tttcgtccta
181 tgtttaggcg acaaaataat ggcaatcaga atcgcagccg tcaaaatcgg cagcgtcttc
241 aaaataataa tcggggcaat aaccgaaatc gtaatcagtt taataggcgc cagaatcagc
301 cgtctcaaag tatgtcattt gaacagcaat tgctgttgat ggcaaatgaa actgcttatg
361 ctgcaactta tccatcagac atgcagaata ttgcccccac taaattggta aagattgcca
421 aaagagctgc aatgcaaatt gtttccggtc atgctaccgt agagatatct aatggcactg
481 aagactctaa tcaacgagtc gccaccttta ctattaaggt ggttatgaat taaaaccttt
541 tcagcaacct taaggttggt ctgttattta attgtttagt tttatcaaca tggcataact
601 tgcctctggc tccactgtgt gtaaccatct agattttaat ggttttgcta gatataatgg
661 ttgagtgtct ccatgtaaga tgttatgtta gttagaatta ggcctacccc agatgtagta
721 aaaagcagct
//