GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS BYMCP 1370 bp ss-RNA VRL 05-MAR-1991
DEFINITION Barley yellow mosaic virus capsid protein gene, 3' end.
ACCESSION D00544
KEYWORDS capsid protein.
SOURCE Barley yellow virus, strain (II-1), cDNA to viral RNA, clone
pBYT10.
ORGANISM Barley yellow mosaic virus
Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses;
Potyvirus.
REFERENCE 1 (bases 1 to 1370)
AUTHORS Kashiwazaki,S., Hayano,Y., Minobe,Y., Omura,T., Hibino,H. and
Tsuchizaki,T.
TITLE Nucleotide sequence of the capsid protein gene of barley yellow
mosaic virus
JOURNAL J. Gen. Virol. 70, 3015-3023 (1989)
STANDARD full staff_entry
COMMENT The removal of the N- and C-terminal regions of the capsid protein
by mild proteolysis of intact virus particles indicates that both
terminal regions are exposed on the external surfaces of virus
particles.
FEATURES Location/Qualifiers
CDS <1..1142
/note="capsid protein precursor"
mat_peptide 249..1139
/note="capsid protein"
misc_signal 1200..1204
/note="poly(A) signal"
BASE COUNT 400 a 339 c 298 g 333 t
ORIGIN 3 bp upstream of AluI site.
1 tagctatcat gcaatggtcc aagaaagggg gagttctgca ctcatatttg gctggcattt
61 ccgcaattta cgaatccttc aacacaccaa aacttttcaa atcaatctat gcgtatcttc
121 tttggctcac tgaggagcac gaggcagaaa ttctcgcagc catgactcaa tcctcaactg
181 ctcttcccat accatcaatg ctcgatgttt atcggttgca ttatggtgat gatgaaattt
241 ggctgcaagc tgctgatcct ctcactgatg cacaaaaaga agatgcacgc attgctgcag
301 ctgatggagc acgcttcgaa ctagccgatg ctgatcgtag acgtaaagtt gaggctgacc
361 gtgtggaagc ggcaagagtc aaaaaggcag ctgatgctgc actaaaacca gttaacctca
421 cagcaacacg cacgcccaca gaagatgatg gcaaacttaa aacaccatct ggcgctagaa
481 taccatcatc agctgcagat ggtaactgga gcgtgccagc aacgaagcaa gttaacgctg
541 gtttgacact caaaattccc ctgaataagc tcaaaagtgt acctaagtct gttatggagc
601 ataacaactc agtcgcactc gaatctgagc taaaagcctg gactgatgct gtgcgcacaa
661 gtttgggtat cacaactgat gaggcatgga tcgatgccct cattcccttc atcggatggt
721 gctgcaacaa tggcacctca gacaagcatg ctgagaatca agtaatgcaa attgacagcg
781 gaaagggagc tgttacagag atgagtctgt ccccatttat tgttcatgct cgaatgaatg
841 gtggactccg aaggatcatg cgcaactaca gtgatgaaac cgtcttactc atcacaaaca
901 acaaactagt tgcacattgg tcaatgaagc atggcgcttc tgcaaacgca aaatacgctt
961 tcgatttctt cgtcccacga tcatggatga acccacagga tatcgaagtg tcaaagcaag
1021 cgcgcttagc agcacttgga actggaacgt ataacaccat gttaacttcc gacactacca
1081 atctgcgtaa gacaaccaac cacagggttc tggactcaga tggacaccca gaactaacct
1141 aaaccatcac cccgtgcctt atacatcacc cacccccact cataattcag tctttaaatt
1201 atgttcgtga cgtctttgta tcaggctcgg aacggttcta tgatccatat gcctttggca
1261 gttacaatgt cagcattctc attgaggagt atgacagcgt ttgatcagcc gttttcaatc
1321 atccgtcgtt ggatggtggt gcacttacga tacgagtacc agaaggtaat
//