GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS DENP83 2461 bp ss-RNA VRL 05-MAR-1991 DEFINITION Dengue virus type 1, capsid, premembrane, membrane, envelope and nonstructural protein genes. ACCESSION D00503 KEYWORDS capsid protein; envelope protein; membrane protein; nonstructural protein; premembrane protein; structural protein. SOURCE Dengue virus type 1 (strain Philippines 836-1), cDNA to viral RNA. ORGANISM Dengue virus type 1 Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Flaviviridae; Flavivirus (arbovirus group B). REFERENCE 1 (bases 1 to 2461) AUTHORS Chu,M.C., O'Rourke,E.J. and Trent,D.W. TITLE Genetic relatedness among structual protein genes of dengue 1 virus strains JOURNAL J. Gen. Virol. 70, 1701-1712 (1989) STANDARD full staff_entry COMMENT The preM-M coding regions are located between putative signalase cleavage sites that appear to be conserved among DEN-1 strains. FEATURES Location/Qualifiers CDS 91..>2461 /note="polyprotein precursor" mat_peptide 91..432 /note="capsid (C) protein" mat_peptide 433..705 /note="premembrane (prM) protein" mat_peptide 706..930 /note="membrane (M) protein" mat_peptide 931..2412 /note="envelope (E) protein" mat_peptide 2413..>2461 /note="NS1 protein, amino terminus" BASE COUNT 770 a 521 c 635 g 535 t ORIGIN 5'end of virus genome. 1 tcacacaagg aaacagctat caccagatct acgccggaag cttgcttaac gttagactaa 61 cagtttttta ttagagagag cagatctctg atgaacaacc aacggaaaaa gacgggtcga 121 ccgtctttca atatgctgaa acgcgcgaga aaccgcgtgt caactgtttc acagttggcg 181 aagagattct caaaaggatt gctttcaggc caaggaccca tgaaattggt aatggctttt 241 atagcattcc taagatttct agccatacct ccaacagcag gaattttggc tagatggggc 301 tcattcaaga agaatggagc gatcaaagtg ttacggggtt tcaaaaaaga aatctcaaac 361 atgttgaaca taatgaacag gaggaaaaga tctgtgacca tgctcctcat gctgctgccc 421 acagccctgg cgttccatct gaccacccga gggggagagc cgacactgat agttagcaag 481 caggaaagag gaaaatcact tttgtttaag acccctgcag gtgtcaacat gtgcactctc 541 attgcgatgg atttgggaga gttatgtgag gacacaatga cctacaaatg cccccggatc 601 gctgaggcgg aaccagatga cgttgattgc tggtgcaatg ccacagacac atgggtgacc 661 tatgggacgt gttctcaaac cggcgaacac cgacgagaca aacgttccgt ggcactggac 721 ccacacgtgg gacttggtct agaaacaaga accgaaacat ggatgtcctc tgaaggcgcc 781 tggaaacaaa tacaaaaagt ggagacctgg gctctgagac acccaggatt cacggtgata 841 ggcctttttc tagcacatgc tataggaaca tccatcaccc agaaagggat tatttttatt 901 ttgctgatgc tggtaactcc atccatggcc atgcggtgcg tgggaatagg caacagagac 961 ttcgtggaag gactgtcagg agctacgtgg gtggatgtgg tactggagca tggaagttgc 1021 gtcactacca tggcaaaaga caaaccaaca ctggacattg aactcttgaa gacggaggtc 1081 acaaaccctg ccgtcctgcg caaactgtgc attgaagcta aaatatcaaa caccaccacc 1141 gattcgagat gtccaacaca aggagaagcc acgctggtgg aagaacagga cacgaacttt 1201 gtgtgccgac gaacgttcgt ggacagaggc tggggcaatg gttgtgggct attcggaaaa 1261 ggtagcttaa taacgtgtgc taagtttaag tgtgtgacaa aactggaagg aaagatagtc 1321 caatatgaaa acttaaaata ttcagtgata gtcaccgtac acactggaga ccagcaccaa 1381 gttggaaatg agaccacaga acatggaaca attgcaacca taacacctca agctcccacg 1441 tcggaaatac agctgacaga ctacggagct ctaacattgg attgttcacc tagaacaggg 1501 ctagacttta atagaatggt gttgttgaca atggaaaaaa aatcatggct cgtccacaaa 1561 caatggtttc tagacttacc actgccttgg acctcggggg cttcaacatc ccaagagact 1621 tggaatagac aagacttgct ggtcacattt aagacagctc atgcaaaaaa gcaggaagta 1681 gtcgtactag gatcacaaga aggagcaatg cacactgcgt tgactggagc gacagaaatc 1741 caaacgtctg gaacgacaac aatttttgca ggacacctga aatgcagact aaaaatggat 1801 aaactgactt taaaagggat gtcatatgta atgtgcacag ggtcattcaa gttagagaag 1861 gaagtggctg agacccagca tggaactgtt ctagtgcagg ttaaatacga aggaacagat 1921 gcaccatgca agatcccctt ctcgtcccaa gatgagaaag gagtaaccca gaatgggaga 1981 ttgataacag ccaaccccat agtcactgac aaagaaaaac cagtcaacat tgaagcggag 2041 ccaccttttg gtgagagcta cattgtggta ggagcaggtg aaaaagcttt gaaactaagc 2101 tggttcaaga agggaagcac tatagggaaa atgtttgaag caactgcccg tggagcacga 2161 aggatggcca tcctgggaga cactgcatgg gacttcggtt ctataggagg ggtcttcacg 2221 tctgtgggaa aactgataca ccagattttt gggactgcgt atggagtttt gttcagcggt 2281 gtttcttgga ccatgaagat aggaataggg attctgctga catggctagg attaaactca 2341 aggagcacgt ccctttcaat gacgtgtatc gcagttggca tggtcacgct gtacctagga 2401 gtcatggttc aggcggactc gggatgtgta atcaactgga aaggcaaaga actgaaatgt 2461 g //
GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS DENCCV 2474 bp ss-RNA VRL 05-MAR-1991 DEFINITION Dengue virus type 1, capsid, premembrane, membrane, envelope and nonstructural protein genes. ACCESSION D00501 KEYWORDS capsid protein; envelope protein; membrane protein; nonstructural protein; premembrane protein; structural protein. SOURCE Dengue virus type 1 (strain caribbean CV1636/77), cDNA to viral RNA. ORGANISM Dengue virus type 1 Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Flaviviridae; Flavivirus (arbovirus group B). REFERENCE 1 (bases 1 to 2474) AUTHORS Chu,M.C., O'Rourke,E.J. and Trent,D.W. TITLE Genetic relatedness among structual protein genes of dengue 1 virus strains JOURNAL J. Gen. Virol. 70, 1701-1712 (1989) STANDARD full staff_entry COMMENT The preM-M coding regions are located between putative signalase cleavage sites that appear to be conserved among DEN-1 strains. FEATURES Location/Qualifiers CDS 102..>2474 /note="polyprotein precursor" mat_peptide 102..443 /note="capsid (C) protein" mat_peptide 444..716 /note="premembrane (prM) protein" mat_peptide 717..941 /note="membrane (M) protein" mat_peptide 942..2423 /note="envelope (E) protein" mat_peptide 2424..>2474 /note="NS1 protein, amino terminus" BASE COUNT 774 a 515 c 641 g 544 t ORIGIN 5'end of virus genome. 1 ggataaccaa ttcacacaag gaaacagcta tcaccagatc tacgccggaa gcttgcttaa 61 cgttagacta acagtttttt attagagaga gcagatctct gatgaacaac caacggaaaa 121 agacgggtcg accgtctttc aatatgctga aacgcgcgag aaaccgcgtg tcaactggtt 181 cacagttggc gaagagattc tcaaaaggat tgctttcagg ccaaggaccc atgaaattgg 241 tgatggcttt catagcattt ctaagatttc tagccatacc cccaacagca ggaattttgg 301 ctagatggag ctcattcaag aagaatggag cgatcaaagt gttacggggt ttcaaaaaag 361 agatctcaag catgttgaac ataatgaaca ggaggaaaag atccgtgacc atgctcctca 421 tgctgctgcc cacagctctg gcgttccatt tgaccacacg agggggagag ccgacactga 481 tagttagtaa gcaggaaaga ggaaagtcac tcttgtttaa gacctctgca ggtgtcaata 541 tgtgcactct cattgcgatg gatttgggag agttatgtga ggacacaatg acctacaaat 601 gcccccggat cactgagagg caaccagatg acgttgactg ctggtgcaat gccacagaca 661 catgggtgac ctatgggacg tgttctcaaa ccggcgaaca ccgacgagac aaacgttccg 721 tggcactggc cccacacgtg ggacttggtc tagaaacaag aaccgaaaca tggatgtcct 781 ctgaaggcgc ctggaaacaa atacaaaaag tggagacttg ggctttgaga cacccaggat 841 tcacggtgat aggccttttt ttagcacatg ccataggaac atccatcact cagaaaggga 901 tcattttcat tttgctgatg ctggtaacac catcaatggc catgcgatgc gtgggaatag 961 gcaacagaga cttcgttgaa ggactgtcag gagcaacgtg ggtggacgtg gtattggagc 1021 atggaagctg cgtcaccacc atggcaaaaa ataaaccaac attggacatt gaactcttga 1081 agacggaggt cacgaaccct gccgtcctgc gcaaactgtg cattgaagct aaaatatcaa 1141 acaccaccac cgattcaaga tgtccaacac aaggagaggc tacattggtg gaagaacaag 1201 acgcgaactt tgtgtgtcga cgaacgtttg tggacagagg ctggggcaat ggttgtgggc 1261 tattcggaaa aggtagcttc ttgacgtgtg ctaagttcaa gtgtgtgaca aaactggaag 1321 gaaagatagt tcaatatgaa aacttaaaat attcagtcat agtcaccgta cacactgggg 1381 accagcatca agttggaaat gagaccacag aacatggaac aattgcaacc ataacacctc 1441 aagctcccac gtcggaaata cagctgacag actacggagc tctaacattg gattgttcac 1501 ctagaacagg gctagacttt aatagagtgg tgttgttgac aatgaagaaa aaatcatggc 1561 tcgtccacaa acaatggttt ctagacttac cactgccttg gacctcgggg gcttcaacat 1621 cccaagagac ttggaataga caagacttgc tggtcacatt taagacagct catgcaaaga 1681 agcaggaagt agtcgtacta ggatcacaag aaggagcaat gcacactgcg ctgactgggg 1741 cgacagaaat ccagacgtct ggaacgacaa caatttttgc aggacacctg aaatgcagac 1801 taaaaatgga taaactgact ttaaaaggga tgtcatatgt aatgtgcaca gggtcattca 1861 agttagagaa ggaagtggct gagacccagc atggaactgt tctagtgcag gttaaatacg 1921 aaggaacaga tgcaccatgc aagatcccct tctcgtccca agatgagaaa ggagtaaccc 1981 agaatgggag attgataaca gccaacccca tagtcattga caaagaaaaa ccagtcaaca 2041 ttgaagcgga gccacctttt ggtgagagct atattgtggt aggatcaggt gaaaaagctt 2101 tgaaactaag ctggttcaag aagggaagca gtatagggaa aatgtttgaa gcaactgccc 2161 gtggagcacg aaggatggcc atcctgggag acaccgcatg ggacttcggt tctataggag 2221 gggtgttcac gtctgtggga aaactgatac accagatttt tgggactgcg tatggaattt 2281 tgttcagcgg ggtttcttgg accatgaaaa taggaatagg gattctgctg acatggctag 2341 gattaaattc aaggagcacg tccctttcaa tgacgtgtat cgcagttggc atggtcacac 2401 tgtacctagg agtcatggtt caggcggact cgggatgtgt aatcaactgg aaaggcaaag 2461 aactgaaatg tggc //
GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS DENTAH 2474 bp ss-RNA VRL 05-MAR-1991 DEFINITION Dengue virus type 1, capsid, premembrane, membrane, envelope and nonstructural protein genes. ACCESSION D00502 KEYWORDS capsid protein; envelope protein; membrane protein; nonstructural protein; premembrane protein; structural protein. SOURCE Dengue virus type 1 (strain Thailand AHF82-80), cDNA to viral RNA. ORGANISM Dengue virus type 1 Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Flaviviridae; Flavivirus (arbovirus group B). REFERENCE 1 (bases 1 to 2474) AUTHORS Chu,M.C., O'Rourke,E.J. and Trent,D.W. TITLE Genetic relatedness among structual protein genes of dengue 1 virus strains JOURNAL J. Gen. Virol. 70, 1701-1712 (1989) STANDARD full staff_entry COMMENT The preM-M coding regions are located between putative signalase cleavage sites that appear to be conserved among DEN-1 strains. FEATURES Location/Qualifiers CDS 102..>2474 /note="polyprotein precursor" mat_peptide 102..443 /note="capsid (C) protein" mat_peptide 444..716 /note="premembrane (prM) protein" mat_peptide 717..941 /note="membrane (M) protein" mat_peptide 942..2423 /note="envelope (E) protein" mat_peptide 2424..>2474 /note="NS1 protein, amino terminus" BASE COUNT 780 a 516 c 641 g 537 t ORIGIN 5'end of virus genome. 1 ggataaccaa ttcacacaag gaaacagcta tcaccagatc tacgccggaa gcttgcttaa 61 cgttagacta acagtttttt attagagaga gcagatctct gatgaacaac caacggaaaa 121 agacgggtaa cccgtctttc aatatgctga aacgcgcgag aaaccgcgtg tcaactggtt 181 cacagctggc gaaaagattc tcaaaaggat tgctttcagg ccaaggaccc atgaaattgg 241 tgatggcttt cgtagcattt ctaagatttc tagccatacc cccaacagca ggaattttga 301 aaagatgggg ctcattcaag aagaatggag cgatcaacgt attacggggt ttcagaaaag 361 agatctcaaa catgttgaac ataatgaaca ggaggagaag atccgtgacc atgatcctca 421 tgctgctgcc cacagctctg gcgttccatc tgaccacacg agggggagag ccgactttga 481 tagttagtaa gcaggaaaga gggaagtcac tcttgtttaa gacctctgca ggtgtcaata 541 tgtgcactct cattgcgatg gatttgggag agttatgtga ggacacaatg acctacaaat 601 gcccccggat gactgaggcg gaaccagatg acgttgactg ctggtgcaat gccacagaca 661 catgggtgac ctatgggacg tgttctcaaa ccggcgaaca ccgacgagac aaacgttccg 721 tggcactgga cccacacgtg ggacttggtc tagaaacaag aaccgaaaca tggatgtcct 781 ctgaaggcgc ctggaaacaa atacaaaaag tggagacttg ggctttgaga cacccaggat 841 tcacggtgat aggccttttt ttagcacatg ccataggaac atccatcact cagaaaggga 901 tcattttcat tttgctgatg ctggtaacac catcaatggc catgcgatgc gtgggaatag 961 gcaacagaga cttcgttgaa ggactgtcag gagcaacgtg ggtggacgtg gtattggagc 1021 atggaagctg cgtcaccacc atggcaaaaa ataaaccaac attggacatt gaactcttga 1081 agacggaggt cacgaaccct gccgtcctgc gcaaactgtg cattgaagct aaaatatcaa 1141 acaccaccac cgattcgaga tgtccaacac aaggagaagc cacgctggtg gaagaacagg 1201 acacgaactt tgtgtgccga cgaacgttcg tggacagagg ctggggcaat ggttgtgggc 1261 tattcggaaa aggtagctta ataacgtgtg ctaagtttaa gtgtgtgaca aaactggaag 1321 gaaagatagt ccaatatgaa aacttaaaat attcagtcat agtcaccgta cacactggag 1381 accaacatca agttggaaat gagaccacag aacatggaac aattgcaacc ataacacctc 1441 aagctcccac gtcggaaata cagctgacag actacggagc tctaacattg gattgttcac 1501 ctagaacagg gctagacttt aatagagtgg tgttgttgac aatgaagaaa aaatcatggc 1561 tcgtccacaa acaatggttt ctagacttac cactgccttg gacctcgggg gcttcaacat 1621 cccaagagac ttggaataga caagacttgc tggtcacatt taagacagct catgcaaaaa 1681 agcaggaagt agtcgtacta ggatcacaag aaggagcaat gcacactgcg ctgactgggg 1741 cgacagaaat ccaaacgtct ggaacgacaa caatttttgc aggacacctg aaatgcagac 1801 taaaaatgga taaactgact ttaaaagggg tatcatatgt aatgtgcaca gggtcattca 1861 agttagagaa ggaagtggct gagacccagc atggaactgt tctagtgcag gttaaatacg 1921 aaggaacaga tgcaccatgc aagatcccct tctcgtccca agatgagaaa ggagtaaccc 1981 agaatgggag attgataaca gccaacccca tagtcattga caaagaaaaa ccagtcaaca 2041 ttgaagcgga gccacctttt ggtgagagct atattgtggt aggagcaggt gaaaaagctt 2101 tgaaactaag ctggttcaag aagggaagca gtatagggaa aatgtttgaa gcaactgccc 2161 gtggagcacg aaggatggcc atcctgggag acaccgcatg ggacttcggt tctataggag 2221 gggtgttcac gtctgtggga aaactgatac accagatttt tgggactgcg tatggagttt 2281 tgttcagcgg ggtttcttgg accatgaaaa taggaatagg gattctgctg acatggctag 2341 gattaaattc aaggagcacg tccctttcaa tgacgtgtat cgcagttggc atggtcacac 2401 tgtacctagg agtcatggtt caggcggact cgggatgtgt aatcaactgg aaaggcaaag 2461 aactgaaatg tggc //