GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS DENP83 2461 bp ss-RNA VRL 05-MAR-1991
DEFINITION Dengue virus type 1, capsid, premembrane, membrane, envelope and
nonstructural protein genes.
ACCESSION D00503
KEYWORDS capsid protein; envelope protein; membrane protein; nonstructural
protein; premembrane protein; structural protein.
SOURCE Dengue virus type 1 (strain Philippines 836-1), cDNA to viral RNA.
ORGANISM Dengue virus type 1
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Flaviviridae; Flavivirus (arbovirus group B).
REFERENCE 1 (bases 1 to 2461)
AUTHORS Chu,M.C., O'Rourke,E.J. and Trent,D.W.
TITLE Genetic relatedness among structual protein genes of dengue 1 virus
strains
JOURNAL J. Gen. Virol. 70, 1701-1712 (1989)
STANDARD full staff_entry
COMMENT The preM-M coding regions are located between putative signalase
cleavage sites that appear to be conserved among DEN-1 strains.
FEATURES Location/Qualifiers
CDS 91..>2461
/note="polyprotein precursor"
mat_peptide 91..432
/note="capsid (C) protein"
mat_peptide 433..705
/note="premembrane (prM) protein"
mat_peptide 706..930
/note="membrane (M) protein"
mat_peptide 931..2412
/note="envelope (E) protein"
mat_peptide 2413..>2461
/note="NS1 protein, amino terminus"
BASE COUNT 770 a 521 c 635 g 535 t
ORIGIN 5'end of virus genome.
1 tcacacaagg aaacagctat caccagatct acgccggaag cttgcttaac gttagactaa
61 cagtttttta ttagagagag cagatctctg atgaacaacc aacggaaaaa gacgggtcga
121 ccgtctttca atatgctgaa acgcgcgaga aaccgcgtgt caactgtttc acagttggcg
181 aagagattct caaaaggatt gctttcaggc caaggaccca tgaaattggt aatggctttt
241 atagcattcc taagatttct agccatacct ccaacagcag gaattttggc tagatggggc
301 tcattcaaga agaatggagc gatcaaagtg ttacggggtt tcaaaaaaga aatctcaaac
361 atgttgaaca taatgaacag gaggaaaaga tctgtgacca tgctcctcat gctgctgccc
421 acagccctgg cgttccatct gaccacccga gggggagagc cgacactgat agttagcaag
481 caggaaagag gaaaatcact tttgtttaag acccctgcag gtgtcaacat gtgcactctc
541 attgcgatgg atttgggaga gttatgtgag gacacaatga cctacaaatg cccccggatc
601 gctgaggcgg aaccagatga cgttgattgc tggtgcaatg ccacagacac atgggtgacc
661 tatgggacgt gttctcaaac cggcgaacac cgacgagaca aacgttccgt ggcactggac
721 ccacacgtgg gacttggtct agaaacaaga accgaaacat ggatgtcctc tgaaggcgcc
781 tggaaacaaa tacaaaaagt ggagacctgg gctctgagac acccaggatt cacggtgata
841 ggcctttttc tagcacatgc tataggaaca tccatcaccc agaaagggat tatttttatt
901 ttgctgatgc tggtaactcc atccatggcc atgcggtgcg tgggaatagg caacagagac
961 ttcgtggaag gactgtcagg agctacgtgg gtggatgtgg tactggagca tggaagttgc
1021 gtcactacca tggcaaaaga caaaccaaca ctggacattg aactcttgaa gacggaggtc
1081 acaaaccctg ccgtcctgcg caaactgtgc attgaagcta aaatatcaaa caccaccacc
1141 gattcgagat gtccaacaca aggagaagcc acgctggtgg aagaacagga cacgaacttt
1201 gtgtgccgac gaacgttcgt ggacagaggc tggggcaatg gttgtgggct attcggaaaa
1261 ggtagcttaa taacgtgtgc taagtttaag tgtgtgacaa aactggaagg aaagatagtc
1321 caatatgaaa acttaaaata ttcagtgata gtcaccgtac acactggaga ccagcaccaa
1381 gttggaaatg agaccacaga acatggaaca attgcaacca taacacctca agctcccacg
1441 tcggaaatac agctgacaga ctacggagct ctaacattgg attgttcacc tagaacaggg
1501 ctagacttta atagaatggt gttgttgaca atggaaaaaa aatcatggct cgtccacaaa
1561 caatggtttc tagacttacc actgccttgg acctcggggg cttcaacatc ccaagagact
1621 tggaatagac aagacttgct ggtcacattt aagacagctc atgcaaaaaa gcaggaagta
1681 gtcgtactag gatcacaaga aggagcaatg cacactgcgt tgactggagc gacagaaatc
1741 caaacgtctg gaacgacaac aatttttgca ggacacctga aatgcagact aaaaatggat
1801 aaactgactt taaaagggat gtcatatgta atgtgcacag ggtcattcaa gttagagaag
1861 gaagtggctg agacccagca tggaactgtt ctagtgcagg ttaaatacga aggaacagat
1921 gcaccatgca agatcccctt ctcgtcccaa gatgagaaag gagtaaccca gaatgggaga
1981 ttgataacag ccaaccccat agtcactgac aaagaaaaac cagtcaacat tgaagcggag
2041 ccaccttttg gtgagagcta cattgtggta ggagcaggtg aaaaagcttt gaaactaagc
2101 tggttcaaga agggaagcac tatagggaaa atgtttgaag caactgcccg tggagcacga
2161 aggatggcca tcctgggaga cactgcatgg gacttcggtt ctataggagg ggtcttcacg
2221 tctgtgggaa aactgataca ccagattttt gggactgcgt atggagtttt gttcagcggt
2281 gtttcttgga ccatgaagat aggaataggg attctgctga catggctagg attaaactca
2341 aggagcacgt ccctttcaat gacgtgtatc gcagttggca tggtcacgct gtacctagga
2401 gtcatggttc aggcggactc gggatgtgta atcaactgga aaggcaaaga actgaaatgt
2461 g
//GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS DENCCV 2474 bp ss-RNA VRL 05-MAR-1991
DEFINITION Dengue virus type 1, capsid, premembrane, membrane, envelope and
nonstructural protein genes.
ACCESSION D00501
KEYWORDS capsid protein; envelope protein; membrane protein; nonstructural
protein; premembrane protein; structural protein.
SOURCE Dengue virus type 1 (strain caribbean CV1636/77), cDNA to viral
RNA.
ORGANISM Dengue virus type 1
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Flaviviridae; Flavivirus (arbovirus group B).
REFERENCE 1 (bases 1 to 2474)
AUTHORS Chu,M.C., O'Rourke,E.J. and Trent,D.W.
TITLE Genetic relatedness among structual protein genes of dengue 1 virus
strains
JOURNAL J. Gen. Virol. 70, 1701-1712 (1989)
STANDARD full staff_entry
COMMENT The preM-M coding regions are located between putative signalase
cleavage sites that appear to be conserved among DEN-1 strains.
FEATURES Location/Qualifiers
CDS 102..>2474
/note="polyprotein precursor"
mat_peptide 102..443
/note="capsid (C) protein"
mat_peptide 444..716
/note="premembrane (prM) protein"
mat_peptide 717..941
/note="membrane (M) protein"
mat_peptide 942..2423
/note="envelope (E) protein"
mat_peptide 2424..>2474
/note="NS1 protein, amino terminus"
BASE COUNT 774 a 515 c 641 g 544 t
ORIGIN 5'end of virus genome.
1 ggataaccaa ttcacacaag gaaacagcta tcaccagatc tacgccggaa gcttgcttaa
61 cgttagacta acagtttttt attagagaga gcagatctct gatgaacaac caacggaaaa
121 agacgggtcg accgtctttc aatatgctga aacgcgcgag aaaccgcgtg tcaactggtt
181 cacagttggc gaagagattc tcaaaaggat tgctttcagg ccaaggaccc atgaaattgg
241 tgatggcttt catagcattt ctaagatttc tagccatacc cccaacagca ggaattttgg
301 ctagatggag ctcattcaag aagaatggag cgatcaaagt gttacggggt ttcaaaaaag
361 agatctcaag catgttgaac ataatgaaca ggaggaaaag atccgtgacc atgctcctca
421 tgctgctgcc cacagctctg gcgttccatt tgaccacacg agggggagag ccgacactga
481 tagttagtaa gcaggaaaga ggaaagtcac tcttgtttaa gacctctgca ggtgtcaata
541 tgtgcactct cattgcgatg gatttgggag agttatgtga ggacacaatg acctacaaat
601 gcccccggat cactgagagg caaccagatg acgttgactg ctggtgcaat gccacagaca
661 catgggtgac ctatgggacg tgttctcaaa ccggcgaaca ccgacgagac aaacgttccg
721 tggcactggc cccacacgtg ggacttggtc tagaaacaag aaccgaaaca tggatgtcct
781 ctgaaggcgc ctggaaacaa atacaaaaag tggagacttg ggctttgaga cacccaggat
841 tcacggtgat aggccttttt ttagcacatg ccataggaac atccatcact cagaaaggga
901 tcattttcat tttgctgatg ctggtaacac catcaatggc catgcgatgc gtgggaatag
961 gcaacagaga cttcgttgaa ggactgtcag gagcaacgtg ggtggacgtg gtattggagc
1021 atggaagctg cgtcaccacc atggcaaaaa ataaaccaac attggacatt gaactcttga
1081 agacggaggt cacgaaccct gccgtcctgc gcaaactgtg cattgaagct aaaatatcaa
1141 acaccaccac cgattcaaga tgtccaacac aaggagaggc tacattggtg gaagaacaag
1201 acgcgaactt tgtgtgtcga cgaacgtttg tggacagagg ctggggcaat ggttgtgggc
1261 tattcggaaa aggtagcttc ttgacgtgtg ctaagttcaa gtgtgtgaca aaactggaag
1321 gaaagatagt tcaatatgaa aacttaaaat attcagtcat agtcaccgta cacactgggg
1381 accagcatca agttggaaat gagaccacag aacatggaac aattgcaacc ataacacctc
1441 aagctcccac gtcggaaata cagctgacag actacggagc tctaacattg gattgttcac
1501 ctagaacagg gctagacttt aatagagtgg tgttgttgac aatgaagaaa aaatcatggc
1561 tcgtccacaa acaatggttt ctagacttac cactgccttg gacctcgggg gcttcaacat
1621 cccaagagac ttggaataga caagacttgc tggtcacatt taagacagct catgcaaaga
1681 agcaggaagt agtcgtacta ggatcacaag aaggagcaat gcacactgcg ctgactgggg
1741 cgacagaaat ccagacgtct ggaacgacaa caatttttgc aggacacctg aaatgcagac
1801 taaaaatgga taaactgact ttaaaaggga tgtcatatgt aatgtgcaca gggtcattca
1861 agttagagaa ggaagtggct gagacccagc atggaactgt tctagtgcag gttaaatacg
1921 aaggaacaga tgcaccatgc aagatcccct tctcgtccca agatgagaaa ggagtaaccc
1981 agaatgggag attgataaca gccaacccca tagtcattga caaagaaaaa ccagtcaaca
2041 ttgaagcgga gccacctttt ggtgagagct atattgtggt aggatcaggt gaaaaagctt
2101 tgaaactaag ctggttcaag aagggaagca gtatagggaa aatgtttgaa gcaactgccc
2161 gtggagcacg aaggatggcc atcctgggag acaccgcatg ggacttcggt tctataggag
2221 gggtgttcac gtctgtggga aaactgatac accagatttt tgggactgcg tatggaattt
2281 tgttcagcgg ggtttcttgg accatgaaaa taggaatagg gattctgctg acatggctag
2341 gattaaattc aaggagcacg tccctttcaa tgacgtgtat cgcagttggc atggtcacac
2401 tgtacctagg agtcatggtt caggcggact cgggatgtgt aatcaactgg aaaggcaaag
2461 aactgaaatg tggc
//GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS DENTAH 2474 bp ss-RNA VRL 05-MAR-1991
DEFINITION Dengue virus type 1, capsid, premembrane, membrane, envelope and
nonstructural protein genes.
ACCESSION D00502
KEYWORDS capsid protein; envelope protein; membrane protein; nonstructural
protein; premembrane protein; structural protein.
SOURCE Dengue virus type 1 (strain Thailand AHF82-80), cDNA to viral RNA.
ORGANISM Dengue virus type 1
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Flaviviridae; Flavivirus (arbovirus group B).
REFERENCE 1 (bases 1 to 2474)
AUTHORS Chu,M.C., O'Rourke,E.J. and Trent,D.W.
TITLE Genetic relatedness among structual protein genes of dengue 1 virus
strains
JOURNAL J. Gen. Virol. 70, 1701-1712 (1989)
STANDARD full staff_entry
COMMENT The preM-M coding regions are located between putative signalase
cleavage sites that appear to be conserved among DEN-1 strains.
FEATURES Location/Qualifiers
CDS 102..>2474
/note="polyprotein precursor"
mat_peptide 102..443
/note="capsid (C) protein"
mat_peptide 444..716
/note="premembrane (prM) protein"
mat_peptide 717..941
/note="membrane (M) protein"
mat_peptide 942..2423
/note="envelope (E) protein"
mat_peptide 2424..>2474
/note="NS1 protein, amino terminus"
BASE COUNT 780 a 516 c 641 g 537 t
ORIGIN 5'end of virus genome.
1 ggataaccaa ttcacacaag gaaacagcta tcaccagatc tacgccggaa gcttgcttaa
61 cgttagacta acagtttttt attagagaga gcagatctct gatgaacaac caacggaaaa
121 agacgggtaa cccgtctttc aatatgctga aacgcgcgag aaaccgcgtg tcaactggtt
181 cacagctggc gaaaagattc tcaaaaggat tgctttcagg ccaaggaccc atgaaattgg
241 tgatggcttt cgtagcattt ctaagatttc tagccatacc cccaacagca ggaattttga
301 aaagatgggg ctcattcaag aagaatggag cgatcaacgt attacggggt ttcagaaaag
361 agatctcaaa catgttgaac ataatgaaca ggaggagaag atccgtgacc atgatcctca
421 tgctgctgcc cacagctctg gcgttccatc tgaccacacg agggggagag ccgactttga
481 tagttagtaa gcaggaaaga gggaagtcac tcttgtttaa gacctctgca ggtgtcaata
541 tgtgcactct cattgcgatg gatttgggag agttatgtga ggacacaatg acctacaaat
601 gcccccggat gactgaggcg gaaccagatg acgttgactg ctggtgcaat gccacagaca
661 catgggtgac ctatgggacg tgttctcaaa ccggcgaaca ccgacgagac aaacgttccg
721 tggcactgga cccacacgtg ggacttggtc tagaaacaag aaccgaaaca tggatgtcct
781 ctgaaggcgc ctggaaacaa atacaaaaag tggagacttg ggctttgaga cacccaggat
841 tcacggtgat aggccttttt ttagcacatg ccataggaac atccatcact cagaaaggga
901 tcattttcat tttgctgatg ctggtaacac catcaatggc catgcgatgc gtgggaatag
961 gcaacagaga cttcgttgaa ggactgtcag gagcaacgtg ggtggacgtg gtattggagc
1021 atggaagctg cgtcaccacc atggcaaaaa ataaaccaac attggacatt gaactcttga
1081 agacggaggt cacgaaccct gccgtcctgc gcaaactgtg cattgaagct aaaatatcaa
1141 acaccaccac cgattcgaga tgtccaacac aaggagaagc cacgctggtg gaagaacagg
1201 acacgaactt tgtgtgccga cgaacgttcg tggacagagg ctggggcaat ggttgtgggc
1261 tattcggaaa aggtagctta ataacgtgtg ctaagtttaa gtgtgtgaca aaactggaag
1321 gaaagatagt ccaatatgaa aacttaaaat attcagtcat agtcaccgta cacactggag
1381 accaacatca agttggaaat gagaccacag aacatggaac aattgcaacc ataacacctc
1441 aagctcccac gtcggaaata cagctgacag actacggagc tctaacattg gattgttcac
1501 ctagaacagg gctagacttt aatagagtgg tgttgttgac aatgaagaaa aaatcatggc
1561 tcgtccacaa acaatggttt ctagacttac cactgccttg gacctcgggg gcttcaacat
1621 cccaagagac ttggaataga caagacttgc tggtcacatt taagacagct catgcaaaaa
1681 agcaggaagt agtcgtacta ggatcacaag aaggagcaat gcacactgcg ctgactgggg
1741 cgacagaaat ccaaacgtct ggaacgacaa caatttttgc aggacacctg aaatgcagac
1801 taaaaatgga taaactgact ttaaaagggg tatcatatgt aatgtgcaca gggtcattca
1861 agttagagaa ggaagtggct gagacccagc atggaactgt tctagtgcag gttaaatacg
1921 aaggaacaga tgcaccatgc aagatcccct tctcgtccca agatgagaaa ggagtaaccc
1981 agaatgggag attgataaca gccaacccca tagtcattga caaagaaaaa ccagtcaaca
2041 ttgaagcgga gccacctttt ggtgagagct atattgtggt aggagcaggt gaaaaagctt
2101 tgaaactaag ctggttcaag aagggaagca gtatagggaa aatgtttgaa gcaactgccc
2161 gtggagcacg aaggatggcc atcctgggag acaccgcatg ggacttcggt tctataggag
2221 gggtgttcac gtctgtggga aaactgatac accagatttt tgggactgcg tatggagttt
2281 tgttcagcgg ggtttcttgg accatgaaaa taggaatagg gattctgctg acatggctag
2341 gattaaattc aaggagcacg tccctttcaa tgacgtgtat cgcagttggc atggtcacac
2401 tgtacctagg agtcatggtt caggcggact cgggatgtgt aatcaactgg aaaggcaaag
2461 aactgaaatg tggc
//