GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS FSBAPSGP 1949 bp ss-mRNA VRT 05-MAR-1991 DEFINITION Cherry salmon apopolysialoglycoprotein mRNA, complete cds. ACCESSION D00531 KEYWORDS apopolysialoglycoprotein; repeat sequence. SOURCE Cherry salmon immature ovaries, cDNA to mRNA, clones lambda YAc-1, 3, 11. ORGANISM Oncorhynchus masou Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes; Actinopterygii; Salmoniformes; Salmonoidei; Salminidae. REFERENCE 1 (bases 1 to 1949) AUTHORS Sorimachi,H., Emori,Y., Kawasaki,H., Suzuki,K. and Inoue,Y. TITLE Molecular cloning and characterization of cDNAs coding for apopolysialoglycoproteins in cherry salmon (Oncorhynchus masou) eggs JOURNAL J. Biochem. 107, 61-67 (1990) STANDARD full staff_entry COMMENT There are 39 units of the 39-bp repeating sequence between position 324 and 1844. The repeating sequence of 39-bp is identical among the different clones, although the number of repeats vary. FEATURES Location/Qualifiers CDS 6..1865 /note="pre-proapopolysialoglycoprotein" sig_peptide 9..323 /note="signal peptide and pro-peptide (putative)" mat_peptide 324..1865 /note="apopolysialoglycoprotein" misc_signal 1934..1939 /note="polyadenylation signal" misc_feature 1949..1949 /note="polyadenylation site" BASE COUNT 341 a 756 c 501 g 351 t ORIGIN 5 bp upstream of the initiation codon. 1 ttttcatgat catgggaggt gtgagagaag tgctgctcgt tgtgatgact gtgggggttg 61 tcaaagtttc ttgttaccct gttggaaagt cccagaagca agatcaagtc tctctgcaga 121 ggagacttgg agagctgtca tcaaatgacg tctccattgt gcatgccctg gccttgctcc 181 gatccatagg gtctgacgct aaacaagcca gagaagagta tttagagacc aatgaagtag 241 aatcccaagc ttcaccaaac catggtagct ctccggcaaa tgatgccctg tcctctgagg 301 agaagctgag gcgcgtgtcc tctgacgacg ccacctctga agctgcgacc ggcccgtcct 361 ctgacgacgc cacctctgaa gctgcgaccg gcccgtcctc tgacgacgcc acctctgaag 421 ctgcgaccgg cccgtcctct gacgacgcca cctctgaagc tgcgaccggc ccgtcctctg 481 acgacgccac ctctgaagct gcgaccggcc cgtcctctga cgacgccacc tctgaagctg 541 cgaccggccc gtcctctgac gacgccacct ctgaagctgc gaccggcccg tcctctgacg 601 acgccacctc tgaagctgcg accggcccgt cctctgacga cgccacctct gaagctgcga 661 ccggcccgtc ctctgacgac gccacctctg aagctgcgac cggcccgtcc tctgacgacg 721 ccacctctga agctgcgacc ggcccgtcct ctgacgacgc cacctctgaa gctgcgaccg 781 gcccgtcctc tgacgacgcc acctctgaag ctgcgaccgg cccgtcctct gacgacgcca 841 cctctgaagc tgcgaccggc ccgtcctctg acgacgccac ctctgaagct gcgaccggcc 901 cgtcctctga cgacgccacc tctgaagctg cgaccggccc gtcctctgac gacgccacct 961 ctgaagctgc gaccggcccg tcctctgacg acgccacctc tgaagctgcg accggcccgt 1021 cctctgacga cgccacctct gaagctgcga ccggcccgtc ctctgacgac gccacctctg 1081 aagctgcgac cggcccgtcc tctgacgacg ccacctctga agctgcgacc ggcccgtcct 1141 ctgacgacgc cacctctgaa gctgcgaccg gcccgtcctc tgacgacgcc acctctgaag 1201 ctgcgaccgg cccgtcctct gacgacgcca cctctgaagc tgcgaccggc ccgtcctctg 1261 acgacgccac ctctgaagct gcgaccggcc cgtcctctga cgacgccacc tctgaagctg 1321 cgaccggccc gtcctctgac gacgccacct ctgaagctgc gaccggcccg tcctctgacg 1381 acgccacctc tgaagctgcg accggcccgt cctctgacga cgccacctct gaagctgcga 1441 ccggcccgtc ctctgacgac gccacctctg aagctgcgac cggcccgtcc tctgacgacg 1501 ccacctctga agctgcgacc ggcccgtcct ctgacgacgc cacctctgaa gctgcgaccg 1561 gcccgtcctc tgacgacgcc acctctgaag ctgcgaccgg cccgtcctct gacgacgcca 1621 cctctgaagc tgcgaccggc ccgtcctctg acgacgccac ctctgaagct gcgaccggcc 1681 cgtcctctga cgacgccacc tctgaagctg cgaccggccc gtcctctgac gacgccacct 1741 ctgaagctgc gaccggcccg tcctctgacg acgccacctc tgaagctgcg accggcccgt 1801 cctctgacga cgccacctct gaagctgcga ccggcccgtc ctctgacgac gccactgata 1861 tctgacatgg gacatgcaat tgttcatggg tactctagtc cagtgtgtaa atgcatttgc 1921 ttgttttggc tcaattaaac attaactgt //