GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS MCVSATRA 338 bp ss-RNA VRL 05-MAR-1991
DEFINITION Cucumber mosaic virus satellite RNA, complete cds.
ACCESSION D00541
KEYWORDS satellite RNA.
SOURCE Cucumber mosaic virus (strain Ra), cDNA to satellite RNA, clone
CMVRaSAT.
ORGANISM Cucumber mosaic virus
Viridae; ss-RNA nonenveloped viruses; Isometric ss-RNA viruses;
Cucumovirus.
REFERENCE 1 (bases 1 to 338)
AUTHORS Devic,M., Jaegle,M. and Baulcombe,D.
TITLE Symptom production on tobacco and tomato is determined by two
distinct domains of the satellite RNA of cucumber mosaic virus
(strain Y)
JOURNAL J. Gen. Virol. 70, 2765-2774 (1989)
STANDARD full staff_review
COMMENT These data kindly submitted in computer readable form by:
Martine J. Devic
The Sainsbury laboratory
John Innes Institute
Colney lane
Norwich NR4 7 UH
U.K.
Phone: (0603) 52571
Telex: 975122(JIINOR G)
Fax: (0603)56844
The sequence of the R satellite RNA has been described previously
by Jacquemond and Lauquin. However, the sequence they described
differs at 36 positions from the sequence of these cDNA clones.
For this reason and to avoid confusion, they refer to their variant
as the Ra satellite RNA in [J. Gen. Virol. 70, 2765-2774 (1989)].
The cDNA clone was short of the
full length by 11 nucleotides at the 5' end. The missing Ra
satellite RNA was sequenced directly from the RNA.
FEATURES Location/Qualifiers
misc_RNA 1..338
/note="Ra satellite RNA"
BASE COUNT 74 a 88 c 89 g 87 t
ORIGIN 5' end of the satellite RNA.
1 gttttgtttg ttagagaatt gcgtagaggg gttatatcta cgtgaggatc ttatcactcg
61 gcggtgtggg ttacctccct gctacggcgg gttgagttga cgcacctcgg actggggacc
121 gctggcttgc gagctatgtc cgctactctc agcactacgc gctcatttga gcccccgctc
181 agtttgctag caaaacccgg cccatggttt gccgttacct ggaatttcga aagaaaaact
241 ctgtaagtgt atccgttgac gacgcacgca gggagaagct aaaacctata aggtcatgcc
301 agtctccgtg aatgtctaaa cattcctcca caggaccc
//