GenBank-Updates@genbank.bio.net (03/05/91)
LOCUS PTM3TR 3164 bp ss-RNA VRL 05-MAR-1991
DEFINITION Potato virus M genomic RNA, 3'-terminal region.
ACCESSION D00515
KEYWORDS coat protein; nucleic acid binding protein.
SOURCE Potato virus M (Russian wild strain), cDNA to viral RNA.
ORGANISM Potato virus M
Viridae; ss-RNA nonenveloped viruses; Carlaviridae.
REFERENCE 1 (bases 1 to 534)
AUTHORS Zavriev,S.K.
JOURNAL Unpublished (1989) Institute of Agricultural Biotechnology, Moscow
STANDARD full staff_entry
REFERENCE 2 (bases 535 to 3164)
AUTHORS Rupasov,V.V., Morozov,S.Y., Kanyuka,K.V. and Zavriev,S.K.
TITLE Partial nucleotide sequence of potato virus M RNA shows
similarities to potexviruses in gene arrangement and the encoded
amino acid sequences
JOURNAL J. Gen. Virol. 70, 1861-1869 (1989)
STANDARD full staff_entry
COMMENT These data kindly submitted in computer readable form by:
Sergei K. Zavriev
Institute of Agricultural Biotechnology
Bldg 4, 12 Pskovskaya st.
Moscow 127253
USSR
Phone : 9081035; 9080756
FEATURES Location/Qualifiers
CDS 653..1318
/note="25K protein"
CDS 1318..1647
/note="12K protein"
CDS 1644..1835
/note="7K protein"
variation 1664..1664
/note="nucleotide polymorphism a or g"
CDS 1857..2771
/note="34K protein (coat protein)"
variation 2490..2490
/note="nucleotide polymorphism g or a(Ala or Thr)"
variation 2504..2504
/note="nucleotide polymorphism t or c"
variation 2705..2705
/note="nucleotide polymorphism c or t"
variation 2759..2759
/note="nucleotide polymorphism t or g"
CDS 2768..3055
/note="11K protein (pot. nucleic acid-binding protein)"
variation 3007..3007
/note="nucleotide polymorphism g or a"
BASE COUNT 827 a 649 c 881 g 807 t
ORIGIN
1 atgcgtcaca agatgaattt atcatggctt tcgagctgga attgatgaag tacttaaggt
61 taccaagtga tctaatcgag gattacaagt tcatcaagac tagcctagga tctaaattgg
121 gcaattttgc tataatgcgc ttctccgggg aggcaagcac ttttctgttt aacacactgg
181 ccaatatgtt gttcaccttt atgaggtaca acatacgggg tgatgaattc atatgctttg
241 ctggggatga tatgtgcgcg tcgcgaagat tgcaacccac aaagaagttt gctcacttcc
301 tagacaagct taaactgaaa gcgaaggtgc aattcgtgca attcgtgaat aaaccaactt
361 tttgcggttg gcacctgtgt cccgatggta tatataaaaa gccgcaactt gtgctagaga
421 gaatgtgcat cgcgaaagag atgaacaacc tgagcaattg cattgaggtg gcgtacgcat
481 ataagttggg ggagaaggct gtgaatagaa tggatgagga ggaagtcgcg gcgttctaca
541 actgcgtgag aatcatagtg cgaaacaaac acctcattcg ctctgatgtg aaacaagtat
601 ttgaagtgct ttaattagtg tagcttaggt attgctattg tattgaatat ttatggatgt
661 gattgtagat ttgttgtata aatacaagtt tgagcgttta agtaataagt tagtgtgccc
721 tatagttgtt cactgtgtgc ctggggctgg caagagtagc ttaattcgcg agttgttaga
781 attagatagt cgcttctgtg catacacagc tggtgtagag gaccaaccaa ggttgagcgg
841 gaattggatc aggaagtgga gcgggcaaca accggaaggc aaatttgtgg ttctggacga
901 gtacactctg ttgactgaag tgcctccggt atttgcattg ttcggtgacc ccatacaatc
961 gaacacaagc gccgttcagc gtgctgactt tgtgtgctca gtgagtagaa gattcggcag
1021 tgccacgtgc gggctgttac gggagttggg ctggaacgtt cgaagtgaaa aggctgacct
1081 ggtgcaagta tctgatatat acacaaaaga ccccctgggc aaagttgtgt tctcagagga
1141 ggaagtgggt tgcttgctga gatcacacgg ggtggaagca ttgagcttgc aggaaataac
1201 aggccaaact ttcgaggtgg taacgttcgt gacttcagag aattctccag tgatcaatcg
1261 agcggctgcc tatcagtgca tgacaaggca tcgaaggctc tgcacatctg tgtcctgatg
1321 ccacttacac cgccgcctga cttcacaaag gtataccttt ctgctgcact cggggtgtcg
1381 cttgctctag ttgtttggct gcttataagg agtacactac ctgtggtggg ggatagagat
1441 cacaacttgc cacacggagg ttggtacagg gacgggacca aatcagtgtt ttacaacagc
1501 cccggccggc tcaactcaat agaggctaga aaagctccgc tacttggtca accttgggct
1561 atcgtcgtcc tgctagtact gcttatctgg gcgagtcaca agctaggaag gcctaactgt
1621 agagcctgtg cgggctcaca cacatgatag tgtatgtact tgtaggactg agcgccttct
1681 gcattgtgct gtatttgatc tctcagggac agtctgactg cgtggtgcta atcaccggcg
1741 aatcagtgcg cgtgcaaggg tgccgaattg acggtgagtt cggaagtgtg ctatcaaaat
1801 tgaagccgtt tgggtgtggt tcctttaggt cataaggtga atctgaaata gtgagtatgg
1861 gagattcaac gaagaaagct gaaactgcca aagatgaggg cacttcgcaa gaaaggagag
1921 aagcgcgacc actgccgact gctgctgact ttgaggggaa ggacacatcg gagaacactg
1981 atgggcgtgc tgcagatgct gatggagaaa tgtcattgga gcggaggctt gacagcctcc
2041 gagaattcct gcgagagcgg aggggcgcaa ttcgagtgac aaacccaggg ttagagactg
2101 gcaggccaag gttgcagcta gctgaaaata tgcgccctga tcccacgaat ccgtacaaca
2161 ggccgtccat agaagctctc agccggatca agccaatcgc gatctcaaac aatatggcca
2221 catctgagga tatgatgcgc atatatgtga acctggaggg gctaggggtg ccgactgagc
2281 acgtgcagca ggtagtgatt caggctgtgc tattttgcaa ggacgcaagc agctccgtat
2341 tcctggatcc gcgaggctcg ttcgagtggc caagaggtgc tataactgca gatgccgtct
2401 tggctgtgct gaagaaggat gcagaaacac tgcgaagggt gtgtaggctg tatgccccgg
2461 tgacatggaa tcatatgctg acgcacaacg cgcctccggc cgattgggct gccatggggt
2521 ttcagtatga ggatcgcttc gctgctttcg actgctttga ttacgttgag aatactgctg
2581 cagtccaacc cctagaggga ttgatcaggc gacctacccc aagggaaaag gtagctcaca
2641 atacgcacaa agacatcgca gtgcgtggag caaatcgcaa tcaggtgttc agctctctca
2701 atgccgaggt cactggtggt atgaatggtc cggagctcac tagagattat gtaaagtcta
2761 atagaaaatg aaggacgtaa ccaaggtggc tttacttata gcgagagcta tgtgtgcctc
2821 ttcaggtacc tttgtgtttg aactagcttt tagtattact gagtatacgg gtcgaccact
2881 tggcggtggg agatccaagt acgcacgtcg tagacgtgct attagtatag ctaggtgtca
2941 caggtgctat cgcctctggc ccccaactgt gtttactact aggtgtgata ataaacattg
3001 tgtcctggta tctcttacaa tgtgcgcgtg gcgcaattta ttgatgaagg agtaaccgag
3061 gtgatacctt cagtcatcaa caagcgagag tagccattaa atcctattta atatataacg
3121 tgtgctacta taaataaaat ttggttttta actattttta gcca
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