GenBank-Updates@genbank.bio.net (03/06/91)
LOCUS LBAHELJ 3364 bp ds-DNA BCT 06-MAR-1991 DEFINITION L.helveticus helveticin J genes, complete cds. ACCESSION M59360 M30121 KEYWORDS bacteriocin; helveticin. SOURCE L.helveticus (strain 481) DNA. ORGANISM Lactobacillus helveticus Prokaryota; Bacteria; Firmicutes; Regular asporogenous rods; Lactobacillaceae. REFERENCE 1 (bases 1 to 3364) AUTHORS Joerger,M. and Klaenhammer,T. TITLE Cloning, expression, and nucleotide sequence of the Lactobacillus helveticus 481 gene encoding the bacteriocin helveticin J JOURNAL J. Bacteriol. 172, 6339-6347 (1990) STANDARD full staff_entry FEATURES Location/Qualifiers CDS 1..484 /note="ORF1" /codon_start=2 /partial -35_signal 1391..1396 /gene="helveticin" -10_signal 1414..1419 /gene="helveticin" RBS 1626..1632 /gene="helveticin" CDS 1638..1952 /note="ORF2" /codon_start=1638 sig_peptide 1638..1706 /note="ORF2" /codon_start=1638 mat_peptide 1707..1949 /note="ORF2" /codon_start=1707 RBS 1971..1975 /gene="helveticin" CDS 1983..2984 /product="helveticin" /gene="helveticin" /codon_start=1983 RBS 3285..3291 /gene="helveticin" CDS 3297..3364 /note="ORF4" /codon_start=3297 /partial BASE COUNT 1153 a 479 c 648 g 1084 t ORIGIN 1 gaattccaaa gatgcagatc ctatttatgt aggaaaaaac aactacaaat atgctttaac 61 gcattatgaa accttcaagg gcaagacaat tagtccagct aaggttcaaa acgttaaatt 121 tagagttgaa aagatagtca gattccacgg caaaattagt ggtgctccat tgtacttagt 181 ggcttctaag gataagaagt acagctgctg gactacgcaa gcaatgcttc aatattatta 241 cttcaatagc aaggggatgc gcggagtagt aaatccattg aagagaattg ctaatagaag 301 tgctgataag aatattatta gtctaaagaa taaacaaaat aaacgtgact ttaatgcagc 361 aatgaaggct gctaataagc ttaagggcag tcagaagaag tttgttgtaa attctttgaa 421 gcaacttaag aaagataaca atattggcgt tgaaggcgac aacttgcttt tgtttggttt 481 ttaaagtgaa aaaaatacgt taaaagaaca tagaaaaact gatgcatcta agctatgaag 541 ctaggagcat cagttttttg ttacattaga tcgtcattgt ctttaaaaag ttgcttggtt 601 gcagcggtca ttctttcggg gatgccatag ttctgcataa aggttcctgg ttcttgaatg 661 tagtcaccat ttttgcagga atagtcgtaa ataatcttaa gagaaaatag atctgcttcc 721 tcttcttccg agttttgtct tgaaaagcta ggccaatagg cgatacctga atcacctaac 781 attaagtgac caatttcgtg accaatgata aaaggcaatt cattaggatt atgccaatta 841 gtattgatta ccattttatg agcattctta aatgaaagtg ctgggtcgta tggctctcct 901 ttaaccaaga tgtatgaaag accgtgctta aaagcataat tgagtaagta ctcaattaac 961 tcttctttac ctaagtttct catttcttgt ctgcacgacc ttccttaatg tcatcttcca 1021 ttagtcctcg aatcatattg agatatctct caggaacgtt gtaaccatga tatgaataag 1081 gcttttcttc gtctagtgga atagaagttg gttgtccttt tgcaggtata ggggtaggat 1141 ccatcagttt taccttttag gtaatcgatt gaagtattta gtacttcggc aacggttcta 1201 aggcatcgcc accaggtctt ttattcttcc aattatagat agaattagta cctaacccag 1261 ccttatcatt cacttcacgt aagttcattt tatatttttt cgctaattct ttagtacgct 1321 ctaattcaat catggcaagc attctccgaa tattttaaat tattaaataa gtatttttac 1381 taaaaatgta ttgacaatat tagtctttgg acgtaatata agaactgtca acgagatatg 1441 aaagaaataa gaaaaagcct agaaacacgt gtgtaagtaa gaaaggaatc atgtgcttaa 1501 ggttatttct tataccatta tattagtata aatactaata taagtcaacg aatattagta 1561 tctagttgat aaattttatt caaagaggtg gtgccaatga ctgtgcaata aggaaaaaga 1621 gaggtgaaga agaaatcatg gatattcatg attacgttga attgatagct ttagcgtttt 1681 gggttattag tgttgtaagt gttggtatct tgagtcatgt tcattttaag aataagaggc 1741 tggaacagtt tcgtattact gctgatgatt tgatgaaaaa ctacgttggt ttgtacaaca 1801 aagaaagttt agccagcgat caaaaaatca atcggattgt caatgcagta gtagacggac 1861 tagaagctaa aggttttaaa gtggaagacc aagatgtaaa ggatattttt gcaaaggtcg 1921 caaaaattat taatgaaaat tcttctaagt aggaagatag agattttttc ggaggtttta 1981 ttatgaagca tttaaatgaa acaactaatg ttagaatttt aagtcaattt gatatggata 2041 ctggctatca agcagtagtt caaaaaggca atgtaggttc aaaatatgta tatggattac 2101 aacttcgcaa aggtgctact actatcttgc gtggttaccg tggaagtaaa attaataacc 2161 ctattcttga attatctggt caagcaggtg gtcacacaca gacatgggaa tttgctggtg 2221 atcgtaaaga cattaatggt gaagaaagag caggtcaatg gtttataggt gttaaaccat 2281 cgaaaattga aggaagcaaa attatttggg caaagcaaat tgcaagagtt gatcttagaa 2341 atcaaatggg acctcattat tcaaatactg actttcctcg attatcctac ttgaatcgcg 2401 ccggttctaa tccatttgct ggtaataaga tgacgcatgc cgaagccgca gtatcacctg 2461 attatactaa gtttttaatt gctactgttg aaaataactg tattggtcat tttactatat 2521 acaatttaga tacaattaat gaaaaacttg atgaaaaggg aaatagtgaa gatgttaatc 2581 tcgaaactgt taaatacgaa gatagtttta tcattgataa tttatatggt gatgataata 2641 attctattgt aaattcaatt caagggtatg atttggataa tgatggaaat atttatattt 2701 ccagtcaaaa agcgccagat tttgatggct cttattatgc acatcataag cagattgtta 2761 agattccata ttatgctcgg tctaaagaaa gcgaagacca atggagagct gtaaatttaa 2821 gcgaattcgg tggcttggat attccaggta aacatagtga agttgaaagc atccaaatta 2881 ttggtgagaa tcattgttac ttaactgttg catatcattc taaaaataaa gcgggtgaaa 2941 ataaaactac tttgaatgag atttatgaat tatcttggaa ttagattctt gttagtggtc 3001 tcgatttaga tataaactaa caaaagcgga tgaaatattc attattgaaa ttcatcgctt 3061 tttattttta attaaattat tggatatact tataatatat attgctggat atattgctgg 3121 gataagagta aaataattat aggcattatt tctaaattaa aaggacaatt attatgataa 3181 aaaacaagat tatatcagct tcaattgcag cattaatggc tgtaagtcca gtgcttccac 3241 ttagctcaca ggctcatacg gttcaagctg cagataattc tgtcagaaag acagttatgc 3301 ataattcaat tgcttatgat aaagatggca attcaacagg tcaaaagtat tacgcttacg 3361 gatc //