GenBank-Updates@genbank.bio.net (03/06/91)
LOCUS THORNA3 1865 bp ss-RNA VRL 06-MAR-1991
DEFINITION Thogoto virus segment 3 RNA genome.
ACCESSION D00540
KEYWORDS RNA segment 3.
SOURCE Thogoto virus (strain SiAr 126), cDNA to viral RNA.
ORGANISM Thogoto virus
Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses;
Bunyaviridae; Bunyavirus.
REFERENCE 1 (bases 1 to 1865)
AUTHORS Staunton,D., Nuttall,P.A. and Bishop,D.H.
TITLE Sequence analysis of thogoto viral RNA segment 3: evidence for a
distant relation ship between an arbovirus and members of the
orthomyxoviridae
JOURNAL J. Gen. Virol. 70, 2811-2817 (1989)
STANDARD full staff_entry
COMMENT There was a relationship between the Thogoto virus segment 3 gene
product (ORF 1 product)and the PA protein types of the two
influenza virus species.
FEATURES Location/Qualifiers
CDS 21..1814
/note="ORF 1"
misc_signal 1844..1849
/note="poly(A) signal"
BASE COUNT 595 a 408 c 462 g 400 t
ORIGIN 5'end of virus genome.
1 agcaaaaaca agcacttgac atgacagaca ggcccgacca catagacagc agagtatggg
61 agctgtcaga aacacaggaa gactggatca cccaagtcca cggacacgtc aggagagtgg
121 tagaatgctg gaaatacacc atatgctgtc tgataagcaa catgcacact cacaggggag
181 caccacaata tgatgtcttc aagtggcagg acaggagcac catagaatgg atatgtagca
241 agaaaaaagt ccaatacccg gaaagagaca caccagatct gtatgacaat gaacgggcag
301 ttgcatacaa ggtacttctg gtttctgatc tctctgacca ttctcctaca tcaggcattt
361 accacgacct agccttcaat ttagaagggg aggcagaaga atcttgtgca ttggtgctaa
421 gagggagcca actgcaagac ataaaggggt ttttgtgcag ggcactggaa tgggttgtgt
481 caaacaatct aacacaggag gttgtggaaa ctatcagtgg ggaggccaag ctccaatttt
541 ctgtaggcac cactttcagg accttactga agagagacac agattggaat gtgataccta
601 ctcccagagt agaacccaat gtcccaagga ttgaaggaag gaggtggaca cagatgaaga
661 aacttccttt gctaaaagaa aaagagggcc cacccgccca tggagggctc tattgctggg
721 agtcagaata catcgagtgt cccccggaac agaccaagag gccatctctt ggatacactc
781 tcagtctgag attgaatgca ttagggaatc aaatctaccc cagcatcagt catcacctgc
841 ctaacgtcaa gccttcaatc atttgcagag gggaacccgt agatcttgca tttggcataa
901 acaaaaagca agagaagcag tctgcttcat cttcagcctc tggagagtgg aaaagagcag
961 aatatcaagt ggaagaaatg tccttgccgc cctgggtaga ggaagagatg gtcctactca
1021 ggagtgacca agaagacaac tggatagagc tagagaaaaa tgcgatttac actgaggttg
1081 atggagtagc agaagggctg gtggacaagt acatagtgat agtgggcaga acaaaagtgg
1141 catctgtcat agagaaatgg caaattgttg ccacccggac cttctcacaa ctgcacaccg
1201 aaatcgtagc agaaattaca gcttgcccca taatcaccag agacccatca ggcaattgcc
1261 aattctgggg gatggtactg cttgggcccc atcatgtaaa gagagacaca gacaatgctc
1321 cgctgcttat agcggagata atgggagaag acacagaaga gaagtaccct aagcacagcg
1381 tattttctct aaaggaagag aaacagtttc tgctctctct gaagataacc tctttttcga
1441 ggaataaact gtacacattc tccggcatta gaagagtttt gatacagcca gcatcaattt
1501 actcacaagt tgtactctct agggcagctg agaacaacag cctcaattta gaggtaaacc
1561 cagagatcca gctgtaccta gaaggcgctc agagggggat gactctctac caacgggtcc
1621 ggatgatcct atgtttggaa tttctgatgg caatttacaa caaccctcag atggaaggct
1681 ttcttgcaaa catgagacga ctccatatgt ccgagcacgc catgatggaa agaagacagg
1741 tcttcctacc ttttgggtca agaccagaag acaaagttag cttatttggc aaaaggctgg
1801 aacagcatgc ctaatgtgta ctactagaga ggggtattgc aagaaaaaag tgctttgatt
1861 tctct
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